GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_020614375.1	NZ_CP085327	NZ_CP085327.1	Haladaptatus salinisoli strain PSR8 chromosome; complete genome.	494998	496218	937643	937692	2866551	0.17	0.17	0.33	0.33	0.65	0.9253	0.0013	0.9987	1.9302	1555	1582	3137	464330	383079	823825	845392	2516626	0.19	0.16	0.32	0.34	0.66	0.8708	0.2125	0.82	1.9103	2055	1503	1542	3045	457428	377350	812905	833770	2481453	0.19	0.15	0.32	0.34	0.66	0.8706	0.213	0.8196	1.9097	1997	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	135	83	214	230	662	0.2	0.13	0.32	0.35	0	0.67	0.8825	0.2731	0.7744	1.9001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	24	25	49	662	737	1100	1213	3712	0.18	0.2	0.3	0.33	0	0.62	0.8754	0.1795	0.8431	1.9412	3	0	3	1124	816	1151	1419	4510	0.23	0.18	0.27	0.31	0	0.58	0.909	0.1982	0.8242	1.9688	14733	12739	1940	1323	3001	47158	2810	3668	9660	9523	2038	23906	751	26100	2354	18906	766	22384	27508	2197	20830	8067	43599	5698	14573	21560	1370	4505	1806	11054	24108	2593	46848	3282	950	58232	15148	13282	20722	33592	12690	25070	5455	35201	4103	5872	16656	1336	1613	837	19163	48837	753	778	1915	948	780	17372	22532	2625	3529	667	1598	11537
GCF_020614375.1	NZ_CP085328	NZ_CP085328.1	Haladaptatus salinisoli strain PSR8 plasmid unnamed1; complete sequence.	113495	111180	131089	131495	487259	0.23	0.23	0.27	0.27	0.54	0.9541	0.0118	0.9883	1.9956	233	221	454	85564	75539	99290	101712	362105	0.24	0.21	0.27	0.28	0.55	0.9033	0.1828	0.8412	1.9761	280	229	216	445	84827	74731	98371	100799	358728	0.24	0.21	0.27	0.28	0.55	0.9036	0.1825	0.8414	1.976	276	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	14	18	19	23	74	0.19	0.24	0.26	0.31	0	0.57	0.8617	0.2202	0.8019	1.9782	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2469	1761	1052	1253	2587	5071	1744	1944	1049	1535	1486	4388	1104	2913	1164	2453	656	2053	3249	1161	1771	2290	4802	3612	2216	2331	770	1101	1308	2126	4032	1869	4277	641	1438	5091	1818	1271	2251	3051	1297	1743	1579	2966	431	1991	1896	344	490	864	1958	3345	572	676	243	1405	92	1591	2100	1159	1671	136	217	1652
GCF_020614375.1	NZ_CP085329	NZ_CP085329.1	Haladaptatus salinisoli strain PSR8 plasmid unnamed2; complete sequence.	106807	106063	172301	173488	558659	0.19	0.19	0.31	0.31	0.62	0.9286	0.0069	0.9931	1.9588	229	233	462	91404	79694	144135	147748	462981	0.2	0.17	0.31	0.32	0.62	0.8865	0.1826	0.8416	1.9372	393	227	228	455	90429	78851	142753	146379	458412	0.2	0.17	0.31	0.32	0.62	0.8864	0.1833	0.8411	1.9371	388	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2790	2240	746	583	1322	7357	1064	1131	1770	2140	769	4437	376	4999	728	3598	313	3445	4894	798	3338	2067	7085	2319	2537	3754	531	1144	717	2469	4992	1002	7587	703	496	8883	2725	2250	3889	5404	2044	3511	1260	5409	706	1668	3080	343	407	371	3429	7647	402	358	385	498	108	2959	4344	860	1103	95	252	2173
GCF_020614375.1	NZ_CP085330	NZ_CP085330.1	Haladaptatus salinisoli strain PSR8 plasmid unnamed3; complete sequence.	98183	97970	172807	170911	539871	0.18	0.18	0.32	0.32	0.64	0.9315	0.0066	0.9934	1.9454	268	270	538	83229	73876	144396	147975	449476	0.19	0.17	0.32	0.33	0.64	0.8767	0.1978	0.83	1.9217	259	265	258	523	80502	71574	140645	143884	436605	0.19	0.17	0.32	0.33	0.64	0.8764	0.1974	0.8303	1.9211	243	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	3	3	1117	811	1159	1423	4510	0.23	0.18	0.28	0.31	0	0.59	0.9074	0.1967	0.8253	1.9686	2494	1920	540	410	825	7467	719	879	1715	1965	554	4080	262	4751	576	3118	239	3498	5095	584	3401	1552	7690	1414	2306	3587	326	941	539	2142	3991	689	8162	670	381	9150	2600	2211	3588	5461	2114	3954	978	5652	717	1278	3090	303	329	268	3483	8315	244	228	384	357	115	3278	4040	610	758	123	285	2140
GCF_020614375.1	NZ_CP085331	NZ_CP085331.1	Haladaptatus salinisoli strain PSR8 plasmid unnamed4; complete sequence.	50447	52056	54960	55183	212646	0.24	0.24	0.26	0.26	0.52	0.9508	0.0177	0.9825	1.999	85	113	198	36760	31392	38133	40016	146301	0.26	0.22	0.26	0.27	0.53	0.9031	0.1925	0.8331	1.9806	103	84	111	195	36255	30983	37614	39451	144303	0.26	0.22	0.26	0.27	0.53	0.9032	0.1929	0.8329	1.9805	92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	898	729	480	565	1169	2091	746	942	401	616	676	2090	527	1143	521	883	314	750	1186	565	714	858	1778	1713	954	865	343	419	614	829	1379	797	1413	284	720	1918	655	465	833	1078	494	617	751	915	168	874	755	188	254	444	709	1112	312	326	101	650	41	651	718	527	736	72	82	683
GCF_020614375.1	NZ_CP085332	NZ_CP085332.1	Haladaptatus salinisoli strain PSR8 plasmid unnamed5; complete sequence.	3252	2821	3962	4022	14057	0.23	0.2	0.28	0.29	0.57	0.9235	0.0785	0.9263	1.985	19	5	24	2639	1912	3093	3240	10884	0.25	0.17	0.29	0.3	0.58	0.8841	0.2746	0.7738	1.9569	43	19	5	24	2639	1912	3093	3240	10884	0.25	0.17	0.29	0.3	0.58	0.8841	0.2746	0.7738	1.9569	43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	74	48	16	26	79	174	22	38	22	45	43	138	25	120	33	110	13	67	65	29	60	64	158	81	86	75	10	28	33	43	96	29	133	18	39	220	69	49	83	80	44	78	57	114	17	44	71	12	18	26	70	115	10	12	8	29	0	55	60	44	41	10	14	38
GCF_020614375.1	NZ_CP085333	NZ_CP085333.1	Haladaptatus salinisoli strain PSR8 plasmid unnamed6; complete sequence.	82694	83070	86267	86546	338577	0.24	0.25	0.25	0.26	0.51	0.9563	0.0039	0.9961	1.9997	141	133	274	60618	51810	61102	62685	236215	0.26	0.22	0.26	0.27	0.52	0.9062	0.1795	0.8431	1.9804	123	135	129	264	58937	50248	58994	60718	228897	0.26	0.22	0.26	0.27	0.52	0.9064	0.181	0.8418	1.9809	123	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	15	13	29	28	85	0.18	0.15	0.34	0.33	0	0.67	0.8747	0.089	0.9161	1.913	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1315	1157	800	1087	1961	2858	1299	1576	608	972	1351	2957	974	1864	903	1448	613	1291	1714	959	866	1477	2625	2570	1558	1292	553	702	1059	1400	2148	1532	2121	572	1359	2718	991	571	1247	1517	813	1025	1367	1561	236	1453	1047	265	348	708	1077	1759	474	545	157	1119	56	904	1125	820	1469	93	115	1178
GCF_020614375.1	NZ_CP085334	NZ_CP085334.1	Haladaptatus salinisoli strain PSR8 plasmid unnamed7; complete sequence.	3761	4291	4668	4925	17645	0.21	0.24	0.26	0.28	0.54	0.9412	0.0926	0.9122	1.9928	9	13	22	3150	2527	3352	3526	12555	0.26	0.19	0.27	0.28	0.55	0.8866	0.2713	0.776	1.9679	15	9	13	22	3150	2527	3352	3526	12555	0.26	0.19	0.27	0.28	0.55	0.8866	0.2713	0.776	1.9679	15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	75	85	21	41	97	165	48	58	36	67	55	174	41	81	40	98	24	85	89	39	46	64	167	101	89	76	19	39	61	54	121	52	154	27	53	210	56	30	103	88	55	73	87	117	24	69	83	13	24	38	69	92	16	17	3	42	9	49	79	65	68	7	6	51