| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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| GCF_029278565.1 | NZ_CP119559 | NZ_CP119559.1 | Haloarcula halophila strain DFY41 chromosome; complete genome. | 524479 | 523078 | 997102 | 994005 | 0 | 3038664 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.66 | 0.9281 | 0.0029 | 0.9971 | 1.9293 | 1612 | 1565 | 3177 | 496202 | 424390 | 900569 | 905065 | 0 | 2726226 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8766 | 0.1864 | 0.8404 | 1.9125 | 2705 | 1570 | 1521 | 3091 | 487856 | 417200 | 888132 | 891968 | 0 | 2685156 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8764 | 0.1868 | 0.8401 | 1.9119 | 2567 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2 | 0 | 2 | 131 | 80 | 231 | 254 | 0 | 696 | 0.19 | 0.12 | 0.33 | 0.37 | 0 | 0.7 | 0.8714 | 0.2764 | 0.7776 | 1.8675 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 26 | 21 | 47 | 631 | 701 | 1050 | 1167 | 0 | 3549 | 0.18 | 0.2 | 0.3 | 0.33 | 0 | 0.62 | 0.8659 | 0.1887 | 0.8396 | 1.9373 | 0 | 3 | 3 | 6 | 2241 | 1649 | 2324 | 2825 | 0 | 9039 | 0.23 | 0.18 | 0.28 | 0.32 | 0 | 0.59 | 0.9133 | 0.2023 | 0.8203 | 1.9639 | 0 | 15041 | 9735 | 2444 | 3339 | 9326 | 52028 | 5957 | 1573 | 10008 | 10172 | 1191 | 20841 | 2008 | 26029 | 4066 | 18639 | 1326 | 16163 | 26294 | 2401 | 31811 | 11407 | 37389 | 10344 | 21243 | 27153 | 1873 | 5485 | 2781 | 8051 | 32011 | 2484 | 60911 | 1089 | 4833 | 64258 | 15967 | 14631 | 20920 | 44887 | 12170 | 18019 | 4978 | 36039 | 1814 | 3907 | 21986 | 1435 | 4528 | 1515 | 19103 | 37194 | 998 | 1234 | 1589 | 3538 | 684 | 24463 | 22947 | 6344 | 3443 | 546 | 1861 | 6608 |
| GCF_029278565.1 | NZ_CP119560 | NZ_CP119560.1 | Haloarcula halophila strain DFY41 plasmid unnamed1; complete sequence. | 99718 | 100469 | 162735 | 162127 | 0 | 525049 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.62 | 0.9358 | 0.0056 | 0.9944 | 1.9589 | 246 | 209 | 455 | 86301 | 74747 | 136039 | 140079 | 0 | 437166 | 0.2 | 0.17 | 0.31 | 0.32 | 0 | 0.63 | 0.8874 | 0.1703 | 0.8506 | 1.9362 | 264 | 240 | 205 | 445 | 83344 | 72441 | 131974 | 135703 | 0 | 423462 | 0.2 | 0.17 | 0.31 | 0.32 | 0 | 0.63 | 0.8873 | 0.1697 | 0.8511 | 1.936 | 264 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2625 | 1425 | 661 | 856 | 1840 | 7534 | 1261 | 649 | 1564 | 1715 | 480 | 3773 | 601 | 4097 | 962 | 3121 | 354 | 2793 | 4260 | 602 | 4206 | 2040 | 5947 | 2380 | 3515 | 3724 | 434 | 1016 | 664 | 1714 | 5343 | 684 | 8183 | 405 | 1255 | 8531 | 2402 | 1934 | 3177 | 5520 | 1886 | 2153 | 963 | 4819 | 289 | 1061 | 3469 | 348 | 731 | 379 | 3033 | 5427 | 273 | 337 | 334 | 778 | 81 | 3308 | 3589 | 1135 | 818 | 69 | 295 | 1332 |
| GCF_029278565.1 | NZ_CP119561 | NZ_CP119561.1 | Haloarcula halophila strain DFY41 plasmid unnamed2; complete sequence. | 76644 | 72957 | 107399 | 106408 | 0 | 363408 | 0.21 | 0.2 | 0.3 | 0.29 | 0 | 0.59 | 0.944 | 0.0293 | 0.9713 | 1.9772 | 183 | 177 | 360 | 60199 | 52421 | 82886 | 84164 | 0 | 279670 | 0.21 | 0.19 | 0.29 | 0.3 | 0 | 0.6 | 0.8916 | 0.1857 | 0.8395 | 1.9534 | 479 | 176 | 155 | 331 | 56847 | 49674 | 79023 | 80187 | 0 | 265731 | 0.22 | 0.19 | 0.29 | 0.3 | 0 | 0.6 | 0.8918 | 0.1897 | 0.8365 | 1.9539 | 408 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 20 | 20 | 283 | 295 | 481 | 517 | 0 | 1576 | 0.18 | 0.19 | 0.3 | 0.33 | 0 | 0.63 | 0.8836 | 0.1276 | 0.8829 | 1.9377 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1538 | 1102 | 498 | 763 | 1399 | 4206 | 1126 | 869 | 848 | 1203 | 612 | 2920 | 634 | 2440 | 754 | 1828 | 416 | 1656 | 2634 | 574 | 2398 | 1330 | 3585 | 2029 | 2160 | 2035 | 391 | 636 | 626 | 1215 | 2817 | 867 | 4064 | 346 | 892 | 4981 | 1453 | 1120 | 1972 | 2817 | 1210 | 1411 | 777 | 2603 | 252 | 1071 | 1681 | 251 | 443 | 384 | 1731 | 2732 | 221 | 391 | 210 | 806 | 62 | 1778 | 1959 | 733 | 756 | 68 | 201 | 1092 |
| GCF_029278565.1 | NZ_CP119562 | NZ_CP119562.1 | Haloarcula halophila strain DFY41 plasmid unnamed3; complete sequence. | 25039 | 24350 | 32588 | 32518 | 0 | 114495 | 0.22 | 0.21 | 0.28 | 0.28 | 0 | 0.57 | 0.9471 | 0.015 | 0.9852 | 1.9863 | 53 | 64 | 117 | 19609 | 16075 | 24095 | 24854 | 0 | 84633 | 0.23 | 0.19 | 0.29 | 0.3 | 0 | 0.58 | 0.8895 | 0.1936 | 0.8339 | 1.9569 | 99 | 52 | 61 | 113 | 18716 | 15389 | 22933 | 23704 | 0 | 80742 | 0.23 | 0.19 | 0.28 | 0.3 | 0 | 0.58 | 0.8894 | 0.1959 | 0.8322 | 1.9569 | 91 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 423 | 416 | 195 | 258 | 410 | 1461 | 399 | 340 | 283 | 382 | 227 | 932 | 243 | 605 | 246 | 539 | 229 | 397 | 690 | 201 | 596 | 370 | 899 | 749 | 764 | 563 | 155 | 200 | 247 | 359 | 823 | 280 | 1022 | 145 | 296 | 1572 | 399 | 319 | 527 | 787 | 346 | 448 | 309 | 648 | 97 | 332 | 451 | 92 | 163 | 155 | 504 | 678 | 119 | 136 | 95 | 321 | 26 | 539 | 509 | 242 | 306 | 32 | 55 | 363 |