| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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| GCF_030127105.1 | NZ_CP126161 | NZ_CP126161.1 | Haloarcula pelagica strain YJ-61-S chromosome; complete genome. | 596391 | 594224 | 1169694 | 1169613 | 0 | 3529922 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.66 | 0.9208 | 0.0019 | 0.9981 | 1.9222 | 1796 | 1876 | 3672 | 554285 | 477183 | 1045210 | 1041391 | 0 | 3118069 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.67 | 0.8736 | 0.189 | 0.8383 | 1.9033 | 3021 | 1761 | 1821 | 3582 | 546994 | 470519 | 1032689 | 1028281 | 0 | 3078483 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.67 | 0.8734 | 0.1891 | 0.8383 | 1.9028 | 2913 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 2 | 2 | 129 | 80 | 224 | 255 | 0 | 688 | 0.19 | 0.12 | 0.32 | 0.37 | 0 | 0.7 | 0.8713 | 0.2918 | 0.7689 | 1.8672 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 20 | 28 | 48 | 642 | 715 | 1077 | 1189 | 0 | 3623 | 0.18 | 0.2 | 0.3 | 0.33 | 0 | 0.63 | 0.8674 | 0.1994 | 0.8312 | 1.9357 | 0 | 3 | 3 | 6 | 2232 | 1615 | 2355 | 2832 | 0 | 9034 | 0.23 | 0.17 | 0.28 | 0.32 | 0 | 0.61 | 0.906 | 0.2075 | 0.8165 | 1.9531 | 0 | 16800 | 11383 | 2488 | 3342 | 9141 | 59022 | 5555 | 1981 | 10972 | 12120 | 1501 | 21745 | 2187 | 30549 | 4275 | 21274 | 1678 | 20834 | 30343 | 3091 | 38488 | 10577 | 43391 | 11222 | 25080 | 31217 | 1687 | 4741 | 3002 | 7398 | 35957 | 3053 | 67631 | 1168 | 5350 | 74210 | 18559 | 17143 | 24553 | 52878 | 14744 | 23347 | 5251 | 45880 | 2318 | 4111 | 24609 | 1604 | 4837 | 1447 | 22401 | 45349 | 977 | 1353 | 1783 | 3915 | 810 | 28062 | 26712 | 5951 | 3192 | 539 | 2233 | 7150 |
| GCF_030127105.1 | NZ_CP126162 | NZ_CP126162.1 | Haloarcula pelagica strain YJ-61-S plasmid unnamed1; complete sequence. | 83605 | 82583 | 155697 | 156876 | 0 | 478761 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.65 | 0.9274 | 0.0099 | 0.9901 | 1.9315 | 212 | 254 | 466 | 71466 | 65002 | 133576 | 134237 | 0 | 404281 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8774 | 0.1768 | 0.8475 | 1.9123 | 661 | 206 | 254 | 460 | 70906 | 64529 | 132470 | 133177 | 0 | 401082 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8774 | 0.1774 | 0.847 | 1.9122 | 602 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 0 | 1 | 13 | 12 | 24 | 21 | 0 | 70 | 0.19 | 0.17 | 0.34 | 0.3 | 0 | 0.64 | 0.8747 | 0.1067 | 0.899 | 1.9378 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2298 | 1230 | 381 | 531 | 1339 | 6758 | 811 | 271 | 1421 | 1709 | 202 | 2805 | 364 | 4159 | 668 | 2762 | 250 | 2994 | 4236 | 439 | 4692 | 1689 | 6283 | 1589 | 3259 | 3861 | 240 | 704 | 444 | 1293 | 5011 | 412 | 8608 | 157 | 872 | 8436 | 2393 | 2035 | 3200 | 5928 | 1945 | 2611 | 641 | 5736 | 288 | 663 | 3548 | 254 | 576 | 221 | 3004 | 6052 | 118 | 204 | 383 | 638 | 77 | 3520 | 3641 | 839 | 489 | 52 | 331 | 1129 |
| GCF_030127105.1 | NZ_CP126163 | NZ_CP126163.1 | Haloarcula pelagica strain YJ-61-S plasmid unnamed2; complete sequence. | 56792 | 56789 | 72250 | 72292 | 0 | 258123 | 0.22 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9451 | 0.0003 | 0.9997 | 1.9896 | 102 | 109 | 211 | 39636 | 33193 | 46709 | 48623 | 0 | 168161 | 0.23 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.8978 | 0.193 | 0.8322 | 1.9652 | 275 | 100 | 107 | 207 | 38951 | 32563 | 45949 | 47792 | 0 | 165255 | 0.23 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.8976 | 0.1934 | 0.8319 | 1.9649 | 276 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 888 | 707 | 477 | 709 | 1055 | 2691 | 915 | 707 | 624 | 638 | 627 | 1973 | 527 | 1393 | 586 | 1148 | 419 | 1022 | 1403 | 421 | 1219 | 831 | 1865 | 1630 | 1443 | 1219 | 308 | 461 | 471 | 858 | 1810 | 644 | 2104 | 278 | 839 | 2610 | 836 | 520 | 1001 | 1411 | 677 | 797 | 681 | 1234 | 168 | 818 | 948 | 227 | 224 | 287 | 1019 | 1383 | 219 | 269 | 150 | 592 | 41 | 1096 | 955 | 556 | 611 | 57 | 112 | 675 |
| GCF_030127105.1 | NZ_CP126164 | NZ_CP126164.1 | Haloarcula pelagica strain YJ-61-S plasmid unnamed3; complete sequence. | 42692 | 41428 | 53713 | 53566 | 0 | 191399 | 0.22 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9441 | 0.0164 | 0.9838 | 1.9893 | 83 | 81 | 164 | 33804 | 29743 | 41586 | 43202 | 0 | 148335 | 0.23 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.9026 | 0.1781 | 0.844 | 1.971 | 131 | 77 | 78 | 155 | 32913 | 28791 | 40268 | 41950 | 0 | 143922 | 0.23 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.9036 | 0.1811 | 0.8416 | 1.971 | 131 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 828 | 627 | 365 | 501 | 950 | 2352 | 835 | 661 | 458 | 691 | 466 | 1819 | 428 | 1143 | 475 | 895 | 403 | 819 | 1353 | 382 | 1144 | 862 | 1945 | 1398 | 1132 | 891 | 301 | 462 | 472 | 699 | 1465 | 487 | 1796 | 277 | 590 | 2265 | 681 | 538 | 943 | 1331 | 612 | 682 | 568 | 1139 | 122 | 577 | 844 | 179 | 181 | 308 | 774 | 1309 | 182 | 249 | 107 | 523 | 41 | 815 | 907 | 483 | 489 | 49 | 65 | 638 |