GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_018200015.1	NZ_CP073366	NZ_CP073366.1	Haloarcula sinaiiensis ATCC 33800 chromosome; complete genome.	582114	581105	963645	966860	3093724	0.19	0.19	0.31	0.31	0.62	0.9403	0.0025	0.9975	1.9552	1664	1549	3213	544170	464036	861445	876596	2746247	0.2	0.17	0.31	0.32	0.63	0.8885	0.1862	0.8397	1.9376	2143	1624	1508	3132	537240	457840	851717	865947	2712744	0.2	0.17	0.31	0.32	0.63	0.8886	0.1868	0.8392	1.9375	2122	2	2	1	0	0	0	0	0	NA	0.25	0	0	1	1	2	135	97	253	279	764	0.17	0.13	0.33	0.37	0	0.7	0.8799	0.1994	0.8313	1.8774	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	22	25	47	642	704	1068	1170	3584	0.18	0.2	0.3	0.33	0	0.63	0.8747	0.1589	0.8601	1.9406	3	3	6	2279	1669	2306	2798	9052	0.23	0.17	0.28	0.32	0	0.6	0.9092	0.2196	0.8058	1.9579	16404	11275	3680	6220	13015	46618	10913	7555	9906	9998	3370	27320	4444	25478	4738	19328	3050	19303	24223	4867	29193	11888	35258	13683	23397	21564	2980	3846	4298	7677	28293	7079	47377	2717	8318	62978	14900	10812	19653	38447	13297	19452	6149	38570	2525	9653	17535	1655	3889	2763	16792	34201	1241	2410	1379	5392	784	18397	22411	5909	3774	837	1533	7633
GCF_018200015.1	NZ_CP073370	NZ_CP073370.1	Haloarcula sinaiiensis ATCC 33800 plasmid pHsi55; complete sequence.	12638	12406	15383	14867	55294	0.23	0.22	0.28	0.27	0.55	0.9403	0.0263	0.974	1.9935	26	29	55	9299	7957	10709	11506	39471	0.24	0.2	0.27	0.29	0.56	0.8981	0.2051	0.8213	1.9697	45	26	28	54	9265	7910	10667	11428	39270	0.24	0.2	0.27	0.29	0.56	0.8991	0.2004	0.8247	1.9705	45	0	0	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	181	164	106	191	292	630	274	195	115	147	148	469	141	258	152	248	113	218	265	121	294	215	408	456	334	255	87	108	163	167	347	172	435	66	190	673	167	119	201	356	181	211	147	357	42	247	219	59	80	80	221	296	47	65	47	177	13	250	199	116	187	12	36	159
GCF_018200015.1	NZ_CP073367	NZ_CP073367.1	Haloarcula sinaiiensis ATCC 33800 plasmid pHsi117; complete sequence.	24948	25896	32892	32860	116596	0.21	0.22	0.28	0.28	0.56	0.946	0.0191	0.9812	1.9881	48	49	97	19642	16385	24659	24910	85596	0.23	0.2	0.28	0.29	0.58	0.897	0.1987	0.8279	1.9672	87	46	49	95	19293	16042	24208	24469	84012	0.23	0.2	0.28	0.29	0.58	0.8969	0.2	0.8269	1.967	79	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	532	438	148	311	441	1361	431	333	263	420	268	1013	197	616	223	598	163	447	765	199	721	372	980	739	697	622	166	220	250	311	827	322	1098	123	359	1579	472	326	677	836	347	526	322	803	81	390	500	99	140	138	421	710	90	142	71	284	24	519	531	279	327	25	46	325
GCF_018200015.1	NZ_CP073372	NZ_CP073372.1	Haloarcula sinaiiensis ATCC 33800 plasmid pHsi139; complete sequence.	32309	31866	37581	37893	139649	0.23	0.23	0.27	0.27	0.54	0.9474	0.011	0.989	1.9953	80	52	132	27044	22349	28897	31078	109368	0.24	0.2	0.27	0.29	0.56	0.8984	0.199	0.8275	1.9688	102	79	51	130	26606	21984	28642	30735	107967	0.24	0.2	0.27	0.29	0.56	0.8987	0.1974	0.8287	1.9691	102	0	0	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	548	536	277	441	729	1713	615	603	365	397	423	1443	390	800	394	711	284	552	791	351	768	507	1010	1285	967	611	221	355	439	472	952	543	1144	216	586	1766	505	333	644	807	439	525	496	770	169	551	638	168	257	304	656	770	164	186	121	466	38	730	559	353	501	27	75	531
GCF_018200015.1	NZ_CP073371	NZ_CP073371.1	Haloarcula sinaiiensis ATCC 33800 plasmid pHsi204; complete sequence.	45574	46204	56509	55812	204099	0.22	0.23	0.28	0.27	0.55	0.9481	0.0131	0.987	1.9926	71	95	166	33394	26888	37819	38495	136596	0.24	0.19	0.28	0.28	0.56	0.9001	0.1872	0.8377	1.9675	108	66	92	158	31578	25491	35833	36329	129231	0.24	0.19	0.28	0.28	0.56	0.8997	0.1868	0.8383	1.9673	108	2	2	1	0	0	0	0	0	NA	0.5	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	3	3	1144	842	1146	1394	4526	0.24	0.17	0.28	0.31	0	0.59	0.9086	0.2293	0.7975	1.9607	580	638	323	559	868	1948	738	673	365	474	534	1625	477	991	427	913	341	696	997	365	932	653	1451	1336	1061	850	282	383	409	592	1160	577	1474	258	714	2353	657	396	935	1050	586	797	591	1058	154	710	624	164	173	242	627	1018	202	203	124	563	42	787	688	428	593	39	77	532
GCF_018200015.1	NZ_CP073369	NZ_CP073369.1	Haloarcula sinaiiensis ATCC 33800 plasmid pHsi388; complete sequence.	78744	79173	114689	115050	387656	0.2	0.2	0.3	0.3	0.59	0.9436	0.0043	0.9957	1.9751	167	177	344	67609	60512	98091	101129	327341	0.21	0.19	0.3	0.31	0.6	0.8987	0.168	0.8525	1.9573	185	166	176	342	67429	60375	97830	100886	326520	0.21	0.19	0.3	0.31	0.6	0.8988	0.1679	0.8526	1.9574	185	2	2	1	0	0	0	0	0	NA	0.5	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	24	17	41	41	123	0.2	0.14	0.33	0.33	0	0.67	0.887	0.1707	0.8542	1.9113	2050	1101	578	1006	2038	4727	1594	1145	1106	1251	559	3456	753	2986	822	2173	478	2232	2924	796	3111	1714	4184	2202	2729	2444	480	616	702	1293	3391	1162	5178	518	1346	6222	1712	1160	2382	3813	1489	1653	905	3861	323	1509	2337	301	548	445	1995	3931	201	367	257	878	65	2076	2676	834	655	99	178	1122
GCF_018200015.1	NZ_CP073368	NZ_CP073368.1	Haloarcula sinaiiensis ATCC 33800 plasmid pHsi540; complete sequence.	118305	115643	152358	153804	540110	0.22	0.21	0.28	0.28	0.57	0.9481	0.0161	0.984	1.987	258	243	501	92933	76173	115375	120208	404689	0.23	0.19	0.28	0.3	0.58	0.8958	0.1968	0.8308	1.964	518	251	239	490	91278	74833	113587	118075	397773	0.23	0.19	0.28	0.29	0.58	0.8961	0.1966	0.831	1.9643	452	2	2	1	0	0	0	0	0	NA	0.1667	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	31	28	42	48	149	0.21	0.19	0.28	0.32	0	0.6	0.8839	0.1146	0.8933	1.962	3	0	3	1144	839	1149	1394	4526	0.23	0.17	0.28	0.31	0	0.59	0.9094	0.219	0.8063	1.9588	2263	1761	850	1426	2540	6070	2013	1644	1293	1547	1067	4571	1044	3316	1193	2955	840	2235	3200	1091	3093	2105	4559	3714	3210	2903	649	938	1109	1711	3982	1551	5043	652	1883	8340	1919	1319	2749	3910	1894	1996	1408	4074	454	1913	2554	491	641	703	2093	3752	418	570	349	1486	134	2383	2568	1210	1302	128	283	1522