GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000827835.1	NZ_CP010529	NZ_CP010529.1	Haloarcula sp. CBA1115 chromosome; complete genome.	635177	632415	1078524	1077028	3423144	0.19	0.18	0.32	0.31	0.63	0.9429	0.0029	0.9971	1.9509	1722	1742	3464	582112	488787	949349	956254	2976502	0.2	0.17	0.31	0.32	0.64	0.8855	0.1884	0.8379	1.931	2308	1677	1692	3369	573215	481267	937062	943011	2934555	0.2	0.17	0.32	0.32	0.64	0.8855	0.1889	0.8375	1.9308	2276	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	139	100	264	285	788	0.17	0.13	0.33	0.36	0	0.7	0.8792	0.1884	0.841	1.8777	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	26	22	48	648	711	1086	1191	3636	0.18	0.19	0.3	0.33	0	0.63	0.8752	0.1647	0.8563	1.9392	3	6	9	3399	2476	3463	4226	13564	0.23	0.17	0.28	0.32	0	0.6	0.9085	0.2257	0.8006	1.9568	17714	12482	3893	6067	12504	51983	9947	6835	11430	10837	3140	28336	4017	28409	4813	20884	2716	20729	27599	4093	32275	11931	40184	12966	25199	24005	3023	4125	4107	8321	31928	5743	53931	3015	7697	70053	16421	12596	22106	43247	14407	21532	6295	42070	2883	8022	19173	1773	4116	2674	18963	38285	1341	2077	1611	5005	838	20661	24804	5868	4105	845	1686	7850
GCF_000827835.1	NZ_CP010530	NZ_CP010530.1	Haloarcula sp. CBA1115 plasmid unnamed1; complete sequence.	81091	81637	121725	120863	405316	0.2	0.2	0.3	0.3	0.6	0.9438	0.0069	0.9931	1.9718	178	168	346	68121	60286	101078	103725	333210	0.21	0.18	0.3	0.31	0.61	0.896	0.1726	0.8491	1.9519	203	176	168	344	68051	60220	100964	103615	332850	0.21	0.18	0.3	0.31	0.61	0.8961	0.1729	0.8488	1.9519	203	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	25	18	41	39	123	0.2	0.15	0.33	0.32	0	0.65	0.8809	0.1878	0.8356	1.9267	2103	1148	641	948	1841	4906	1405	1050	1163	1317	515	3512	637	3153	781	2274	408	2334	3154	650	3297	1685	4607	2088	2705	2552	445	642	685	1343	3634	878	5632	557	1275	6521	1764	1246	2432	3942	1508	1719	895	4039	307	1278	2384	304	523	422	2155	4111	232	329	260	754	74	2139	2869	792	651	80	190	1065
GCF_000827835.1	NZ_CP010531	NZ_CP010531.1	Haloarcula sp. CBA1115 plasmid unnamed2; complete sequence.	29719	29994	36940	37200	133853	0.22	0.22	0.28	0.28	0.55	0.9457	0.0081	0.9919	1.9916	44	48	92	26303	22454	30111	31550	110418	0.24	0.21	0.27	0.28	0.55	0.9041	0.1678	0.8533	1.9762	81	43	45	88	24595	21042	28055	29331	103023	0.24	0.21	0.27	0.28	0.55	0.9038	0.1676	0.8535	1.9762	65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	510	570	247	388	722	1744	606	481	377	435	378	1399	378	747	325	608	306	539	956	270	739	533	1388	1253	899	530	211	290	341	518	1043	446	1203	171	397	1703	484	334	678	755	402	464	391	652	86	488	542	181	142	243	574	831	159	218	107	410	20	569	522	403	415	21	47	552
GCF_000827835.1	NZ_CP010532	NZ_CP010532.1	Haloarcula sp. CBA1115 plasmid unnamed3; complete sequence.	26236	27115	31184	31961	116496	0.23	0.23	0.27	0.27	0.54	0.9495	0.0288	0.9716	1.9947	62	46	108	22712	17549	23845	25375	89481	0.25	0.19	0.27	0.29	0.56	0.8992	0.2088	0.8205	1.9677	98	60	45	105	22080	17017	23277	24698	87072	0.25	0.19	0.27	0.29	0.56	0.8989	0.2101	0.8195	1.9673	90	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	433	559	239	390	602	1520	482	410	290	349	366	1157	307	604	310	629	301	404	657	263	589	457	787	979	774	530	201	247	278	418	737	372	858	164	416	1531	436	300	582	647	359	425	452	627	137	426	430	184	131	211	481	592	142	162	87	395	33	549	491	280	387	24	48	396
GCF_000827835.1	NZ_CP010533	NZ_CP010533.1	Haloarcula sp. CBA1115 plasmid unnamed4; complete sequence.	24587	23663	28091	27981	104322	0.24	0.23	0.27	0.27	0.54	0.9491	0.0211	0.9793	1.9958	40	60	100	18137	14979	19273	20691	73080	0.25	0.2	0.27	0.29	0.55	0.8987	0.198	0.8287	1.9708	69	40	59	99	17879	14730	19016	20399	72024	0.25	0.2	0.27	0.29	0.56	0.8984	0.1992	0.8277	1.9705	69	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	421	363	180	346	474	1196	437	398	252	291	304	951	292	489	261	459	207	335	525	250	468	375	668	808	625	403	168	221	283	358	632	335	778	144	368	1148	351	237	416	504	281	324	367	552	103	406	405	116	148	186	386	530	100	148	81	368	28	437	379	233	343	23	51	291
GCF_000827835.1	NZ_CP010534	NZ_CP010534.1	Haloarcula sp. CBA1115 plasmid unnamed5; complete sequence.	8692	7312	12980	12931	41915	0.21	0.17	0.31	0.31	0.62	0.9199	0.0881	0.9187	1.9573	47	12	59	7907	6171	11568	11875	37521	0.21	0.17	0.3	0.32	0.62	0.8828	0.194	0.8329	1.9435	191	47	12	59	7907	6171	11568	11875	37521	0.21	0.17	0.3	0.32	0.62	0.8828	0.194	0.8329	1.9435	191	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	195	225	33	106	207	746	180	65	126	223	53	289	69	317	99	298	68	184	290	57	319	178	393	264	388	225	54	50	68	98	467	80	593	22	113	984	203	148	272	440	213	306	62	534	74	117	181	20	43	48	259	354	9	46	20	114	3	251	272	105	113	14	41	118