GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_001485555.1	NZ_BCNA01000001	NZ_BCNA01000001.1	Haloarcula sp. CBA1128; whole genome shotgun sequence.	554338	553646	970538	968849	3047371	0.18	0.18	0.32	0.32	0.64	0.9364	0.0015	0.9985	1.9456	1552	1595	3147	517880	435195	868516	871871	2693462	0.19	0.17	0.32	0.32	0.64	0.884	0.1885	0.838	1.9275	1914	1511	1554	3065	511782	429770	859414	862020	2662986	0.19	0.16	0.32	0.32	0.64	0.884	0.1892	0.8375	1.9272	1886	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	139	100	264	285	788	0.17	0.13	0.33	0.36	0	0.7	0.8792	0.1884	0.841	1.8777	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	26	22	48	648	711	1086	1191	3636	0.18	0.19	0.3	0.33	0	0.63	0.8752	0.1647	0.8563	1.9392	3	3	6	2265	1653	2313	2819	9050	0.23	0.17	0.28	0.32	0	0.6	0.9079	0.2265	0.7997	1.9565	16088	11249	3321	5128	10667	47548	8643	5775	10559	9764	2424	25154	3315	26159	4012	18970	2244	19182	25215	3422	30022	10494	36790	10638	22742	22206	2537	3399	3321	7112	29065	4789	50160	2561	6518	65124	15139	11583	20184	40621	13210	20220	5331	39605	2580	6799	17497	1473	3719	2197	17410	35505	1042	1709	1345	4094	770	18935	22983	5050	3244	764	1531	6805
GCF_001485555.1	NZ_BCNA01000002	NZ_BCNA01000002.1	Haloarcula sp. CBA1128; whole genome shotgun sequence.	81634	81088	120864	121728	405314	0.2	0.2	0.3	0.3	0.6	0.9398	0.0069	0.9931	1.9718	168	183	351	69117	61209	102780	105351	338457	0.21	0.18	0.3	0.31	0.61	0.8962	0.1701	0.851	1.9515	150	167	177	344	67564	59876	100808	103150	331398	0.21	0.18	0.3	0.31	0.61	0.8962	0.1709	0.8504	1.9513	150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	25	18	41	39	123	0.2	0.15	0.33	0.32	0	0.65	0.8809	0.1878	0.8356	1.9267	2105	1157	634	928	1822	4830	1395	1035	1167	1300	504	3471	636	3133	782	2275	406	2331	3150	636	3286	1684	4617	2060	2685	2551	437	624	674	1333	3620	863	5650	545	1264	6518	1750	1255	2426	3974	1516	1701	892	4074	311	1254	2368	298	529	421	2148	4106	229	331	254	756	73	2116	2858	778	631	81	190	1038
GCF_001485555.1	NZ_BCNA01000003	NZ_BCNA01000003.1	Haloarcula sp. CBA1128; whole genome shotgun sequence.	79130	81165	108534	108395	377224	0.21	0.22	0.29	0.29	0.58	0.9483	0.0133	0.9868	1.9836	159	171	330	67415	56049	86728	90388	300580	0.23	0.19	0.29	0.3	0.58	0.8994	0.186	0.8381	1.9636	240	149	166	315	64101	53582	82870	86271	286824	0.23	0.19	0.29	0.3	0.58	0.8994	0.1847	0.8391	1.9638	232	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	0	3	1138	831	1150	1406	4525	0.23	0.17	0.28	0.32	0	0.6	0.9098	0.2223	0.8036	1.9579	1722	1258	604	963	1889	4740	1370	1089	917	1108	723	3327	719	2448	794	1964	483	1680	2498	686	2418	1504	3569	2351	2527	1928	503	742	801	1243	2991	977	4073	456	1203	5405	1421	1097	2007	2959	1286	1451	997	2750	294	1239	1801	312	423	494	1642	3007	301	374	252	939	74	1826	1978	827	867	82	159	1076
GCF_001485555.1	NZ_BCNA01000004	NZ_BCNA01000004.1	Haloarcula sp. CBA1128; whole genome shotgun sequence.	29994	29719	37201	36941	133855	0.22	0.22	0.28	0.28	0.55	0.9456	0.0081	0.9919	1.9916	48	46	94	27119	23240	31309	32750	114418	0.24	0.21	0.27	0.28	0.55	0.9041	0.1675	0.8537	1.976	88	43	45	88	24342	20931	28222	29501	102996	0.24	0.21	0.27	0.28	0.55	0.9037	0.1687	0.8528	1.9759	72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	511	567	239	386	720	1743	609	464	380	428	347	1388	366	765	322	606	299	539	975	252	741	552	1427	1251	893	526	195	289	335	522	1055	434	1237	162	386	1747	485	336	680	769	405	470	378	660	82	487	542	178	139	227	582	850	153	214	106	399	20	568	530	405	395	21	47	546
GCF_001485555.1	NZ_BCNA01000005	NZ_BCNA01000005.1	Haloarcula sp. CBA1128; whole genome shotgun sequence.	27116	26237	31967	31186	116506	0.23	0.23	0.27	0.27	0.54	0.947	0.0288	0.9716	1.9947	45	64	109	23105	17896	24252	25824	91077	0.25	0.19	0.27	0.29	0.56	0.8992	0.2073	0.8214	1.9679	98	44	62	106	22473	17362	23682	25145	88662	0.25	0.19	0.27	0.29	0.56	0.8989	0.2086	0.8205	1.9675	90	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	436	568	244	398	609	1544	487	421	294	361	371	1186	318	616	312	636	307	416	669	269	600	465	802	1001	787	537	207	253	281	425	754	378	875	169	424	1553	450	303	591	652	370	435	458	639	137	439	437	176	132	214	490	602	149	163	89	397	33	559	500	286	398	25	48	409
GCF_001485555.1	NZ_BCNA01000006	NZ_BCNA01000006.1	Haloarcula sp. CBA1128; whole genome shotgun sequence.	24586	23663	28090	27982	104321	0.24	0.23	0.27	0.27	0.54	0.9475	0.0211	0.9793	1.9958	40	59	99	17657	14556	18909	20320	71442	0.25	0.2	0.27	0.29	0.55	0.8986	0.1997	0.8273	1.9706	65	39	58	97	16980	14001	18400	19778	69159	0.25	0.2	0.27	0.29	0.56	0.898	0.2013	0.826	1.9704	65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	415	349	168	320	461	1179	419	370	238	282	267	914	266	475	245	432	189	329	517	228	462	349	661	750	608	383	158	215	258	338	620	319	770	124	348	1126	348	233	404	499	267	314	346	547	101	382	395	107	144	168	379	520	91	137	74	350	28	425	367	218	312	21	48	276