Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_021249405.1 | NZ_CP089593 | NZ_CP089593.1 | Halobacterium zhouii strain XZYJT26 chromosome; complete genome. | 418940 | 421301 | 836445 | 832481 | 0 | 2509167 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.67 | 0.9219 | 0.0052 | 0.9948 | 1.9198 | 1293 | 1317 | 2610 | 390549 | 325188 | 735544 | 734993 | 0 | 2186274 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.67 | 0.8703 | 0.2148 | 0.8167 | 1.9 | 1643 | 1259 | 1278 | 2537 | 385774 | 320979 | 727408 | 726364 | 0 | 2160525 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.67 | 0.87 | 0.216 | 0.8158 | 1.8992 | 1621 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 1 | 2 | 137 | 77 | 227 | 249 | 0 | 690 | 0.2 | 0.11 | 0.33 | 0.36 | 0 | 0.69 | 0.8707 | 0.3195 | 0.7456 | 1.8729 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 21 | 24 | 45 | 616 | 670 | 1003 | 1110 | 0 | 3399 | 0.18 | 0.2 | 0.3 | 0.33 | 0 | 0.62 | 0.8699 | 0.175 | 0.8466 | 1.9429 | 0 | 3 | 0 | 3 | 1111 | 838 | 1129 | 1433 | 0 | 4511 | 0.23 | 0.19 | 0.27 | 0.31 | 0 | 0.59 | 0.9148 | 0.182 | 0.8384 | 1.9674 | 0 | 12115 | 9998 | 2064 | 2487 | 6058 | 45201 | 4267 | 2503 | 9918 | 8022 | 1412 | 15751 | 1420 | 22607 | 3055 | 16273 | 1392 | 22673 | 23370 | 936 | 16592 | 6567 | 40071 | 3824 | 16116 | 17476 | 1119 | 2786 | 1096 | 5561 | 19587 | 1925 | 41697 | 1115 | 2509 | 58180 | 14095 | 11570 | 17951 | 29534 | 10485 | 23887 | 3275 | 35858 | 3078 | 3872 | 12943 | 793 | 1897 | 799 | 13258 | 42293 | 445 | 1068 | 993 | 2428 | 753 | 11910 | 17050 | 2903 | 2135 | 400 | 1384 | 5375 |
GCF_021249405.1 | NZ_CP089594 | NZ_CP089594.1 | Halobacterium zhouii strain XZYJT26 plasmid unnamed1; complete sequence. | 32536 | 32876 | 65613 | 66141 | 0 | 197166 | 0.17 | 0.17 | 0.33 | 0.34 | 0 | 0.67 | 0.9188 | 0.0092 | 0.9908 | 1.9167 | 86 | 89 | 175 | 28990 | 25689 | 58030 | 57067 | 0 | 169776 | 0.17 | 0.15 | 0.34 | 0.33 | 0 | 0.67 | 0.8731 | 0.2088 | 0.8218 | 1.8987 | 156 | 85 | 86 | 171 | 28346 | 24978 | 56431 | 55497 | 0 | 165252 | 0.18 | 0.15 | 0.34 | 0.33 | 0 | 0.67 | 0.8732 | 0.2105 | 0.8204 | 1.8991 | 144 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 882 | 587 | 126 | 157 | 441 | 2957 | 299 | 160 | 776 | 688 | 90 | 972 | 116 | 1914 | 262 | 1314 | 108 | 1777 | 1820 | 66 | 1486 | 529 | 3024 | 239 | 1254 | 1496 | 100 | 246 | 74 | 484 | 1450 | 100 | 3350 | 109 | 232 | 4091 | 1136 | 898 | 1491 | 2220 | 948 | 1550 | 193 | 2811 | 213 | 276 | 1076 | 88 | 131 | 58 | 1231 | 3291 | 17 | 89 | 96 | 192 | 38 | 1048 | 1364 | 203 | 138 | 16 | 117 | 379 |
GCF_021249405.1 | NZ_CP089595 | NZ_CP089595.1 | Halobacterium zhouii strain XZYJT26 plasmid unnamed2; complete sequence. | 25912 | 24371 | 35140 | 35681 | 0 | 121104 | 0.21 | 0.2 | 0.29 | 0.29 | 0 | 0.58 | 0.9388 | 0.0383 | 0.9627 | 1.9788 | 87 | 42 | 129 | 22918 | 18726 | 30229 | 30471 | 0 | 102344 | 0.23 | 0.18 | 0.29 | 0.3 | 0 | 0.59 | 0.8958 | 0.1935 | 0.8329 | 1.9629 | 61 | 84 | 42 | 126 | 22874 | 18676 | 30166 | 30404 | 0 | 102120 | 0.23 | 0.18 | 0.29 | 0.3 | 0 | 0.59 | 0.8959 | 0.1948 | 0.8319 | 1.9626 | 61 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 3 | 0 | 3 | 44 | 50 | 63 | 67 | 0 | 224 | 0.2 | 0.22 | 0.28 | 0.3 | 0 | 0.58 | 0.8923 | 0.1403 | 0.8731 | 1.9737 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 541 | 493 | 186 | 286 | 583 | 1911 | 452 | 420 | 324 | 411 | 283 | 1256 | 193 | 883 | 297 | 638 | 167 | 535 | 975 | 152 | 608 | 458 | 1649 | 993 | 906 | 716 | 130 | 199 | 273 | 429 | 1224 | 300 | 1478 | 76 | 327 | 2001 | 599 | 398 | 726 | 1006 | 371 | 581 | 338 | 926 | 124 | 351 | 616 | 65 | 184 | 211 | 553 | 1051 | 71 | 161 | 47 | 332 | 37 | 678 | 673 | 315 | 303 | 42 | 47 | 481 |
GCF_021249405.1 | NZ_CP089596 | NZ_CP089596.1 | Halobacterium zhouii strain XZYJT26 plasmid unnamed3; complete sequence. | 335 | 230 | 405 | 472 | 0 | 1442 | 0.23 | 0.16 | 0.28 | 0.33 | 0 | 0.61 | 0.9152 | 0.2622 | 0.7723 | 1.9536 | 3 | 0 | 3 | 285 | 188 | 336 | 379 | 0 | 1188 | 0.25 | 0.16 | 0.28 | 0.32 | 0 | 0.6 | 0.8974 | 0.2826 | 0.7672 | 1.9515 | 0 | 3 | 0 | 3 | 285 | 188 | 336 | 379 | 0 | 1188 | 0.25 | 0.16 | 0.28 | 0.32 | 0 | 0.6 | 0.8974 | 0.2826 | 0.7672 | 1.9515 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 9 | 4 | 0 | 4 | 17 | 4 | 3 | 1 | 7 | 2 | 20 | 7 | 11 | 3 | 13 | 1 | 10 | 6 | 4 | 5 | 4 | 10 | 7 | 13 | 8 | 5 | 2 | 2 | 5 | 8 | 4 | 6 | 2 | 1 | 32 | 5 | 3 | 12 | 15 | 5 | 10 | 4 | 18 | 3 | 4 | 3 | 2 | 3 | 2 | 8 | 11 | 0 | 2 | 4 | 1 | 0 | 10 | 11 | 6 | 2 | 1 | 2 | 4 |