Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_021431925.1 | NZ_CP090371 | NZ_CP090371.1 | Halobaculum sp. CBA1158 chromosome; complete genome. | 445419 | 440690 | 996943 | 1003035 | 0 | 2886087 | 0.15 | 0.15 | 0.35 | 0.35 | 0 | 0.69 | 0.9153 | 0.0084 | 0.9917 | 1.8897 | 1512 | 1460 | 2972 | 409739 | 356121 | 867620 | 896026 | 0 | 2529506 | 0.16 | 0.14 | 0.34 | 0.35 | 0 | 0.69 | 0.8597 | 0.1876 | 0.8395 | 1.8724 | 2157 | 1455 | 1417 | 2872 | 400917 | 348517 | 850538 | 878112 | 0 | 2478084 | 0.16 | 0.14 | 0.34 | 0.35 | 0 | 0.69 | 0.8593 | 0.1886 | 0.8388 | 1.8713 | 2137 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 2 | 2 | 116 | 72 | 285 | 290 | 0 | 763 | 0.15 | 0.1 | 0.37 | 0.38 | 0 | 0.75 | 0.842 | 0.2305 | 0.8144 | 1.7965 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 28 | 18 | 46 | 626 | 691 | 1026 | 1132 | 0 | 3475 | 0.18 | 0.2 | 0.3 | 0.33 | 0 | 0.62 | 0.8677 | 0.1644 | 0.8567 | 1.9434 | 0 | 3 | 3 | 6 | 2263 | 1563 | 2422 | 2798 | 0 | 9046 | 0.23 | 0.16 | 0.3 | 0.31 | 0 | 0.61 | 0.8914 | 0.2725 | 0.7636 | 1.9417 | 0 | 12827 | 10522 | 1413 | 1513 | 3817 | 59448 | 3142 | 1218 | 9550 | 8625 | 1044 | 9779 | 1110 | 24541 | 1461 | 15259 | 1000 | 23576 | 24142 | 1331 | 25332 | 5940 | 38337 | 6494 | 13666 | 22195 | 725 | 2975 | 1596 | 7270 | 25269 | 2317 | 49740 | 894 | 1670 | 70333 | 14865 | 15299 | 18890 | 43742 | 9600 | 29356 | 1842 | 43915 | 3564 | 3045 | 18976 | 892 | 2054 | 872 | 19697 | 51475 | 441 | 792 | 1450 | 1085 | 660 | 17853 | 21975 | 3269 | 1782 | 382 | 1830 | 6354 |
GCF_021431925.1 | NZ_CP090372 | NZ_CP090372.1 | Halobaculum sp. CBA1158 plasmid pCBA1158-1; complete sequence. | 40881 | 40357 | 92121 | 90423 | 0 | 263782 | 0.15 | 0.15 | 0.35 | 0.34 | 0 | 0.69 | 0.9093 | 0.0158 | 0.9844 | 1.8908 | 111 | 125 | 236 | 37172 | 32755 | 80070 | 82335 | 0 | 232332 | 0.17 | 0.14 | 0.34 | 0.35 | 0 | 0.69 | 0.8636 | 0.1699 | 0.8525 | 1.8791 | 196 | 111 | 124 | 235 | 37077 | 32624 | 79816 | 82098 | 0 | 231615 | 0.17 | 0.14 | 0.34 | 0.35 | 0 | 0.69 | 0.8636 | 0.1698 | 0.8526 | 1.879 | 196 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1168 | 763 | 143 | 134 | 378 | 5132 | 280 | 72 | 836 | 841 | 68 | 888 | 96 | 2387 | 152 | 1495 | 71 | 2220 | 2313 | 83 | 2366 | 602 | 3567 | 595 | 1227 | 2144 | 64 | 286 | 116 | 809 | 2325 | 222 | 4766 | 69 | 156 | 6543 | 1511 | 1394 | 1950 | 3879 | 1057 | 2415 | 135 | 3977 | 337 | 267 | 1930 | 83 | 209 | 89 | 1946 | 4764 | 32 | 73 | 186 | 97 | 40 | 1772 | 2385 | 277 | 140 | 18 | 177 | 688 |
GCF_021431925.1 | NZ_CP090373 | NZ_CP090373.1 | Halobaculum sp. CBA1158 plasmid pCBA1158-2; complete sequence. | 29839 | 27520 | 38661 | 39758 | 0 | 135778 | 0.22 | 0.2 | 0.28 | 0.29 | 0 | 0.58 | 0.9388 | 0.0544 | 0.9473 | 1.982 | 92 | 49 | 141 | 25326 | 21836 | 33178 | 34092 | 0 | 114432 | 0.22 | 0.19 | 0.29 | 0.3 | 0 | 0.59 | 0.8958 | 0.1868 | 0.838 | 1.9627 | 127 | 92 | 46 | 138 | 24970 | 21521 | 32706 | 33627 | 0 | 112824 | 0.22 | 0.19 | 0.29 | 0.3 | 0 | 0.59 | 0.896 | 0.1894 | 0.8359 | 1.9624 | 107 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 1 | 1 | 15 | 15 | 24 | 21 | 0 | 75 | 0.2 | 0.2 | 0.32 | 0.28 | 0 | 0.6 | 0.8747 | 0.0667 | 0.9375 | 1.969 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 704 | 553 | 247 | 337 | 662 | 1893 | 532 | 445 | 361 | 546 | 364 | 1234 | 251 | 990 | 361 | 729 | 182 | 663 | 1064 | 220 | 737 | 584 | 1730 | 1027 | 955 | 757 | 185 | 275 | 346 | 547 | 1252 | 378 | 1567 | 104 | 408 | 1984 | 617 | 467 | 787 | 1050 | 445 | 590 | 345 | 1013 | 108 | 462 | 739 | 92 | 167 | 231 | 631 | 1117 | 109 | 181 | 63 | 363 | 29 | 724 | 743 | 377 | 358 | 38 | 71 | 517 |
GCF_021431925.1 | NZ_CP090374 | NZ_CP090374.1 | Halobaculum sp. CBA1158 plasmid pCBA1158-3; complete sequence. | 6695 | 6569 | 10488 | 10723 | 0 | 34475 | 0.19 | 0.19 | 0.3 | 0.31 | 0 | 0.62 | 0.9276 | 0.0206 | 0.9796 | 1.9612 | 30 | 28 | 58 | 6366 | 5139 | 8825 | 9727 | 0 | 30057 | 0.21 | 0.17 | 0.29 | 0.33 | 0 | 0.62 | 0.882 | 0.2154 | 0.8152 | 1.9439 | 137 | 30 | 26 | 56 | 6300 | 5064 | 8706 | 9579 | 0 | 29649 | 0.21 | 0.17 | 0.29 | 0.32 | 0 | 0.62 | 0.8819 | 0.2136 | 0.8169 | 1.9446 | 122 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 197 | 176 | 65 | 63 | 133 | 619 | 119 | 74 | 94 | 145 | 68 | 247 | 56 | 275 | 69 | 222 | 48 | 214 | 254 | 32 | 216 | 160 | 342 | 228 | 286 | 183 | 44 | 63 | 27 | 114 | 356 | 77 | 414 | 24 | 84 | 633 | 152 | 104 | 226 | 323 | 164 | 240 | 62 | 349 | 74 | 118 | 182 | 23 | 23 | 22 | 209 | 328 | 13 | 37 | 34 | 56 | 5 | 183 | 221 | 76 | 90 | 4 | 47 | 97 |