GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_022870485.1	NZ_CP095005	NZ_CP095005.1	Halococcus dombrowskii strain H4 chromosome; complete genome.	491725	489174	891607	895031	2767537	0.18	0.18	0.32	0.32	0.65	0.9284	0.0045	0.9955	1.938	1435	1420	2855	454050	394524	806535	798703	2453812	0.19	0.16	0.33	0.33	0.65	0.8752	0.1928	0.8347	1.9172	2116	1398	1387	2785	449602	390732	800241	791816	2432391	0.19	0.16	0.33	0.33	0.65	0.875	0.1928	0.8347	1.9166	2066	NA	NA	NA	NA	NA	NA	NA	0	0	NA	2	2	144	72	274	294	784	0.18	0.1	0.35	0.38	0	0.73	0.8595	0.3281	0.7529	1.8207	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	24	23	47	636	715	1048	1155	3554	0.18	0.2	0.29	0.33	0	0.62	0.8789	0.1615	0.8575	1.9474	0	3	3	1079	784	1203	1463	4529	0.24	0.16	0.29	0.32	0	0.6	0.8974	0.2761	0.7668	1.9507	14143	9517	2057	2525	8177	47932	4621	2415	6605	8929	2429	20141	1923	25523	3157	17308	957	18321	24418	2813	19918	10483	45509	17742	16711	21910	1241	3096	4719	7228	31910	3034	43775	1120	3117	47975	13323	12755	16552	37697	13645	24739	5138	37735	2744	4979	14565	1374	3183	3329	18986	39528	504	1172	1225	3094	673	13361	19881	5706	2555	478	1635	6841
GCF_022870485.1	NZ_CP095006	NZ_CP095006.1	Halococcus dombrowskii strain H4 plasmid unnamed1; complete sequence.	92024	87948	113265	112808	406045	0.23	0.22	0.28	0.28	0.56	0.9451	0.0247	0.9758	1.9905	209	146	355	72765	58400	84859	86100	302124	0.24	0.19	0.28	0.29	0.57	0.8971	0.2032	0.8255	1.969	452	198	137	335	68736	55225	80093	81099	285153	0.24	0.19	0.28	0.29	0.57	0.8973	0.2048	0.8245	1.969	409	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	2	5	67	76	113	126	382	0.18	0.2	0.29	0.33	0	0.62	0.8644	0.1326	0.8784	1.95	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1448	1334	633	1047	1853	4652	1635	1018	867	1301	1020	4072	848	2178	859	1935	548	1672	2327	745	1674	1506	3745	3308	2307	2178	408	804	977	1371	3078	1243	3028	413	1263	4625	1571	930	1910	2390	1337	1816	1302	2204	420	1321	1267	303	494	716	1611	2462	276	495	211	1146	75	1473	1619	994	1253	79	183	1272
GCF_022870485.1	NZ_CP095007	NZ_CP095007.1	Halococcus dombrowskii strain H4 plasmid unnamed2; complete sequence.	56589	56486	73274	74390	260739	0.22	0.22	0.28	0.29	0.57	0.9403	0.0085	0.9916	1.9872	113	114	227	45333	36771	54023	56899	193026	0.24	0.19	0.28	0.3	0.58	0.8972	0.2064	0.8217	1.9645	80	106	108	214	43069	34883	51245	53764	182961	0.24	0.19	0.28	0.3	0.57	0.8973	0.2079	0.8205	1.9644	82	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	14	20	15	23	72	0.19	0.28	0.21	0.32	0	0.53	0.9044	0.387	0.6761	1.9701	3	0	3	1080	783	1203	1463	4529	0.24	0.16	0.29	0.32	0	0.6	0.8969	0.2765	0.7664	1.9506	1174	920	429	617	1113	3153	863	727	530	804	569	2663	470	1493	484	1237	283	1142	1549	456	1028	980	2497	1819	1300	1300	260	530	605	956	2090	658	2193	267	626	3169	973	706	1260	1635	743	1158	759	1552	213	796	954	217	288	436	1002	1812	195	273	135	570	51	942	1151	635	636	58	108	773
GCF_022870485.1	NZ_CP095008	NZ_CP095008.1	Halococcus dombrowskii strain H4 plasmid unnamed3; complete sequence.	27676	25244	35383	34999	123302	0.22	0.2	0.29	0.28	0.57	0.9412	0.0514	0.9506	1.9848	71	43	114	21886	17761	27808	28113	95568	0.23	0.18	0.29	0.3	0.58	0.8946	0.2121	0.8179	1.9651	157	70	42	112	21769	17686	27670	27966	95091	0.23	0.18	0.29	0.3	0.58	0.8948	0.2114	0.8184	1.9652	143	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	542	410	195	298	596	1527	467	337	261	383	296	1075	231	855	284	713	133	583	840	188	602	539	1283	1004	773	773	165	233	315	475	1029	313	1075	126	362	1545	442	451	602	934	614	640	378	984	146	425	457	100	132	198	655	945	64	138	65	256	21	454	601	312	379	29	74	374
GCF_022870485.1	NZ_CP095009	NZ_CP095009.1	Halococcus dombrowskii strain H4 plasmid unnamed4; complete sequence.	74834	73068	100170	102815	350887	0.21	0.21	0.29	0.29	0.58	0.944	0.025	0.9753	1.982	177	153	330	59804	50862	79956	80729	271351	0.23	0.19	0.29	0.3	0.59	0.8952	0.1947	0.8321	1.9627	268	165	144	309	56984	48633	76594	77118	259329	0.23	0.19	0.29	0.3	0.59	0.8949	0.1941	0.8327	1.9622	257	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	30	35	37	44	146	0.21	0.24	0.25	0.3	0	0.55	0.8895	0.2213	0.8111	1.9753	3	0	3	1083	783	1203	1460	4529	0.24	0.16	0.29	0.32	0	0.6	0.8968	0.2769	0.7662	1.9509	1493	1055	535	794	1507	4097	1244	838	813	1072	666	3140	587	2280	653	1808	349	1781	2268	534	1688	1444	3940	2484	1832	2041	323	682	732	1243	3091	940	3358	326	868	4299	1361	1033	1738	2632	1298	1776	935	2668	345	1117	1308	209	385	504	1688	2966	155	369	169	774	69	1401	1746	850	931	65	179	966
GCF_022870485.1	NZ_CP095010	NZ_CP095010.1	Halococcus dombrowskii strain H4 plasmid unnamed5; complete sequence.	12635	12091	15873	16357	56956	0.22	0.21	0.28	0.29	0.57	0.939	0.037	0.9637	1.9872	38	18	56	9498	8028	12058	12242	41826	0.23	0.19	0.28	0.3	0.58	0.8967	0.1879	0.8356	1.97	46	38	18	56	9498	8028	12058	12242	41826	0.23	0.19	0.28	0.3	0.58	0.8967	0.1879	0.8356	1.97	46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	203	198	86	158	259	714	256	141	115	191	122	550	100	316	109	237	62	276	331	77	280	268	638	505	303	295	46	134	129	221	450	182	448	47	155	705	237	162	292	395	211	330	158	354	46	183	181	30	65	106	235	357	28	74	20	160	14	193	240	180	143	11	31	199