| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GCF_029338575.1 | NZ_CP119992 | NZ_CP119992.1 | Halomarina sp. PSR21 chromosome; complete genome. | 446791 | 450919 | 1026316 | 1024636 | 0 | 2948662 | 0.15 | 0.15 | 0.35 | 0.35 | 0 | 0.7 | 0.9115 | 0.0054 | 0.9946 | 1.8867 | 1517 | 1564 | 3081 | 397165 | 355134 | 888158 | 894415 | 0 | 2534872 | 0.16 | 0.14 | 0.35 | 0.35 | 0 | 0.7 | 0.8601 | 0.1865 | 0.8406 | 1.8691 | 1948 | 1482 | 1519 | 3001 | 392548 | 351033 | 879816 | 885827 | 0 | 2509224 | 0.16 | 0.14 | 0.35 | 0.35 | 0 | 0.7 | 0.8597 | 0.1864 | 0.8407 | 1.8676 | 1844 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 2 | 2 | 126 | 69 | 232 | 257 | 0 | 684 | 0.18 | 0.1 | 0.34 | 0.38 | 0 | 0.72 | 0.8693 | 0.3245 | 0.7471 | 1.8381 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 21 | 26 | 47 | 653 | 707 | 1039 | 1148 | 0 | 3547 | 0.18 | 0.2 | 0.29 | 0.32 | 0 | 0.62 | 0.8731 | 0.1647 | 0.8548 | 1.948 | 0 | 0 | 3 | 3 | 1077 | 797 | 1178 | 1473 | 0 | 4525 | 0.24 | 0.16 | 0.28 | 0.32 | 0 | 0.6 | 0.9076 | 0.2801 | 0.7651 | 1.9525 | 0 | 13509 | 11489 | 1794 | 982 | 2605 | 58877 | 1898 | 721 | 8956 | 8960 | 679 | 10400 | 677 | 26014 | 1365 | 16253 | 589 | 21727 | 26093 | 1087 | 21949 | 5548 | 50995 | 5477 | 15146 | 21570 | 891 | 1525 | 1012 | 5935 | 26632 | 1215 | 54861 | 864 | 805 | 60354 | 15570 | 16724 | 21373 | 41515 | 11907 | 33230 | 1117 | 40914 | 4593 | 2180 | 23501 | 729 | 1561 | 507 | 16820 | 55170 | 340 | 592 | 2217 | 842 | 781 | 21450 | 22305 | 2650 | 996 | 299 | 1921 | 5150 |
| GCF_029338575.1 | NZ_CP119993 | NZ_CP119993.1 | Halomarina sp. PSR21 plasmid unnamed1; complete sequence. | 208485 | 211267 | 372482 | 370705 | 0 | 1162939 | 0.18 | 0.18 | 0.32 | 0.32 | 0 | 0.64 | 0.9346 | 0.009 | 0.991 | 1.9434 | 494 | 503 | 997 | 167513 | 149754 | 293439 | 302017 | 0 | 912723 | 0.19 | 0.16 | 0.32 | 0.33 | 0 | 0.65 | 0.8814 | 0.1704 | 0.8506 | 1.9205 | 736 | 480 | 499 | 979 | 164454 | 146708 | 288175 | 296904 | 0 | 896241 | 0.19 | 0.16 | 0.32 | 0.33 | 0 | 0.65 | 0.8812 | 0.17 | 0.851 | 1.92 | 624 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5784 | 4105 | 1477 | 1074 | 2535 | 17511 | 1873 | 1161 | 3135 | 3644 | 929 | 6347 | 741 | 9785 | 1296 | 6319 | 496 | 6364 | 9776 | 998 | 7262 | 3825 | 15490 | 4110 | 5841 | 7108 | 934 | 1286 | 1134 | 3641 | 11384 | 1308 | 17151 | 804 | 1055 | 18013 | 5605 | 4688 | 7711 | 11710 | 3979 | 6856 | 1333 | 11224 | 1287 | 2001 | 8005 | 545 | 1025 | 691 | 6171 | 15315 | 420 | 641 | 913 | 1110 | 228 | 6957 | 8034 | 1743 | 1050 | 152 | 599 | 3058 |
| GCF_029338575.1 | NZ_CP119994 | NZ_CP119994.1 | Halomarina sp. PSR21 plasmid unnamed2; complete sequence. | 20701 | 21057 | 44580 | 44262 | 0 | 130600 | 0.16 | 0.16 | 0.34 | 0.34 | 0 | 0.68 | 0.9143 | 0.0121 | 0.988 | 1.9041 | 73 | 55 | 128 | 15718 | 14495 | 34419 | 33783 | 0 | 98415 | 0.17 | 0.14 | 0.34 | 0.35 | 0 | 0.69 | 0.8607 | 0.186 | 0.8413 | 1.8776 | 207 | 71 | 55 | 126 | 15590 | 14399 | 34262 | 33609 | 0 | 97860 | 0.16 | 0.14 | 0.34 | 0.35 | 0 | 0.69 | 0.8601 | 0.1859 | 0.8415 | 1.8762 | 203 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 483 | 441 | 84 | 68 | 102 | 2012 | 79 | 34 | 351 | 318 | 38 | 412 | 21 | 1016 | 81 | 624 | 19 | 813 | 1042 | 55 | 924 | 269 | 1938 | 278 | 638 | 880 | 35 | 68 | 69 | 280 | 1061 | 52 | 2142 | 41 | 38 | 2252 | 647 | 621 | 961 | 1563 | 478 | 1189 | 43 | 1444 | 201 | 117 | 833 | 31 | 61 | 29 | 752 | 1997 | 26 | 28 | 130 | 34 | 29 | 870 | 913 | 137 | 45 | 10 | 87 | 286 |
| GCF_029338575.1 | NZ_CP119995 | NZ_CP119995.1 | Halomarina sp. PSR21 plasmid unnamed3; complete sequence. | 10303 | 9018 | 18083 | 17732 | 0 | 55136 | 0.19 | 0.16 | 0.33 | 0.32 | 0 | 0.65 | 0.896 | 0.0763 | 0.9279 | 1.9333 | 56 | 14 | 70 | 6933 | 5296 | 11848 | 12244 | 0 | 36321 | 0.2 | 0.14 | 0.32 | 0.34 | 0 | 0.66 | 0.8692 | 0.2267 | 0.8057 | 1.9114 | 215 | 53 | 14 | 67 | 6723 | 5152 | 11527 | 11920 | 0 | 35322 | 0.2 | 0.14 | 0.32 | 0.34 | 0 | 0.66 | 0.8686 | 0.2283 | 0.8043 | 1.9106 | 203 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 188 | 179 | 27 | 42 | 135 | 890 | 108 | 44 | 133 | 108 | 48 | 254 | 47 | 424 | 67 | 165 | 22 | 234 | 264 | 41 | 207 | 123 | 564 | 229 | 286 | 283 | 18 | 36 | 57 | 84 | 271 | 67 | 464 | 24 | 19 | 926 | 277 | 178 | 284 | 437 | 76 | 490 | 67 | 444 | 54 | 60 | 232 | 14 | 56 | 33 | 243 | 595 | 20 | 47 | 16 | 62 | 11 | 353 | 269 | 147 | 74 | 14 | 42 | 101 |