GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_019599515.1	NZ_RKLW01000001	NZ_RKLW01000001.1	Halomicroarcula pellucida strain CECT 7537 NODE_1_length_1254474_cov_18.197347; whole genome shotgun sequence.	211927	214852	415306	412389	1254474	0.17	0.17	0.33	0.33	0.66	0.9244	0.0104	0.9897	1.925	634	687	1321	205143	169326	378488	372590	1125547	0.18	0.15	0.33	0.33	0.66	0.8744	0.192	0.8354	1.9092	863	624	670	1294	203744	167989	375818	369901	1117452	0.18	0.15	0.33	0.33	0	0.66	0.8744	0.193	0.8347	1.9087	851	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	8	16	232	238	392	413	1275	0.18	0.19	0.31	0.32	0	0.63	0.8737	0.1532	0.8645	1.9341	0	2	2	104	77	111	136	428	0.23	0.17	0.28	0.32	0	0.6	0.8861	0.2131	0.8132	1.9562	6667	4552	1310	1185	3355	21383	1950	1216	4004	4171	470	9177	680	12139	1618	8019	834	7829	11029	917	10965	4303	17590	1990	8274	10012	830	1803	1022	2639	10420	826	25296	1390	1343	30192	6948	6008	9097	19931	4969	9489	1994	17578	986	1248	7726	653	1653	492	7669	15987	537	388	520	1258	313	7681	9780	2308	1385	232	749	3505
GCF_019599515.1	NZ_RKLW01000002	NZ_RKLW01000002.1	Halomicroarcula pellucida strain CECT 7537 NODE_2_length_1010699_cov_18.503417; whole genome shotgun sequence.	175923	174657	329753	330366	1010699	0.17	0.17	0.33	0.33	0.65	0.9272	0.0045	0.9955	1.9312	506	565	1071	166124	141379	301049	295325	903877	0.19	0.16	0.33	0.33	0.66	0.8744	0.1982	0.8311	1.9106	798	501	547	1048	164231	139366	297961	292232	893790	0.19	0.16	0.33	0.33	0	0.66	0.8742	0.1993	0.8302	1.91	798	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	54	46	102	115	317	0.17	0.15	0.32	0.36	0	0.68	0.8819	0.1399	0.8694	1.8961	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	8	11	147	165	240	268	820	0.18	0.2	0.29	0.33	0	0.62	0.8705	0.145	0.873	1.9433	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5163	3629	1151	1099	2682	16558	1760	1236	3285	3588	550	7211	669	9670	1450	6342	790	6511	8948	893	9325	3492	13593	2038	6604	8235	792	1548	989	2167	8556	849	19767	1113	1153	23057	5499	4772	7338	15480	3944	7288	1696	13483	813	1257	6018	553	1250	478	6244	12333	459	402	431	1055	220	6002	7649	1810	1311	197	631	2854
GCF_019599515.1	NZ_RKLW01000003	NZ_RKLW01000003.1	Halomicroarcula pellucida strain CECT 7537 NODE_3_length_701488_cov_19.233848; whole genome shotgun sequence.	119429	118144	230896	233019	701488	0.17	0.17	0.33	0.33	0.66	0.9246	0.01	0.9901	1.9235	334	402	736	110868	94011	209994	204589	619462	0.18	0.15	0.33	0.33	0.67	0.8732	0.1985	0.8302	1.9045	333	326	390	716	109238	92662	207780	202056	611736	0.18	0.15	0.34	0.33	0	0.67	0.8728	0.1991	0.8298	1.9033	329	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	9	13	167	195	279	319	960	0.17	0.2	0.29	0.33	0	0.62	0.8839	0.1801	0.8435	1.9443	1	1	2	311	245	320	388	1264	0.25	0.21	0.26	0.28	0	0.54	0.9071	0.1654	0.8498	1.9872	3656	2388	688	574	1693	11782	1025	680	2223	2281	298	4904	317	6353	824	4044	399	4407	6202	590	6725	2187	9389	1158	4381	6001	456	998	520	1330	5915	473	14014	629	639	16536	3756	3406	4738	11803	2760	5476	1065	9726	602	649	4014	264	862	269	4218	8662	294	239	202	610	190	4160	4945	1190	744	151	375	1863
GCF_019599515.1	NZ_RKLW01000004	NZ_RKLW01000004.1	Halomicroarcula pellucida strain CECT 7537 NODE_4_length_489483_cov_15.724493; whole genome shotgun sequence.	91159	92429	153109	152786	489483	0.19	0.19	0.31	0.31	0.62	0.9311	0.008	0.9921	1.9545	192	207	399	80926	67295	128612	128052	404885	0.2	0.17	0.31	0.32	0.63	0.8867	0.1814	0.8431	1.9375	349	187	202	389	79483	66088	126284	125750	397605	0.2	0.17	0.31	0.32	0	0.63	0.8869	0.1805	0.8437	1.9376	349	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2174	1566	685	744	1716	6791	1046	724	1467	1692	430	3727	549	4694	888	3039	423	2649	4044	477	3458	1817	6027	1686	3078	3434	464	811	657	1410	4028	600	7793	584	926	9431	2351	1846	3155	4992	1849	2404	810	4861	341	901	2691	372	596	315	2938	5137	251	312	296	823	75	2524	3321	1012	791	73	241	1528
GCF_019599515.1	NZ_RKLW01000005	NZ_RKLW01000005.1	Halomicroarcula pellucida strain CECT 7537 NODE_5_length_332089_cov_19.076168; whole genome shotgun sequence.	54460	55093	111680	110856	332089	0.16	0.17	0.34	0.33	0.67	0.9196	0.0095	0.9906	1.9148	192	166	358	51799	44529	102763	99968	299059	0.18	0.15	0.34	0.33	0.67	0.8705	0.1978	0.8325	1.8976	310	185	164	349	50470	43414	100353	97558	291795	0.18	0.15	0.34	0.33	0	0.67	0.8707	0.1978	0.8322	1.8975	291	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	31	32	48	48	159	0.2	0.2	0.3	0.3	0	0.6	0.89	0.0571	0.945	1.9679	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1565	1031	312	292	748	5277	512	307	978	1162	126	1966	183	3285	449	1965	191	2200	2776	195	3158	969	4508	548	2111	2837	187	474	244	675	2411	237	6791	305	359	7697	1974	1685	2347	5498	1325	2552	442	4867	347	326	2041	125	466	133	2064	4410	108	114	116	352	89	2164	2683	561	326	47	213	859
GCF_019599515.1	NZ_RKLW01000006	NZ_RKLW01000006.1	Halomicroarcula pellucida strain CECT 7537 NODE_6_length_85896_cov_19.340752; whole genome shotgun sequence.	14038	13656	29499	28703	85896	0.16	0.16	0.34	0.33	0.68	0.9106	0.0275	0.9729	1.9069	50	30	80	13536	10898	26737	26344	77515	0.18	0.15	0.34	0.33	0.67	0.8706	0.21	0.8215	1.8949	84	46	28	74	13290	10737	26340	25956	76323	0.18	0.15	0.34	0.34	0	0.68	0.87	0.2053	0.8253	1.8936	84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	79	45	136	155	415	0.19	0.11	0.33	0.37	0	0.7	0.8805	0.3395	0.7235	1.8612	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	24	26	51	49	150	0.16	0.17	0.34	0.33	0	0.67	0.8806	0.1779	0.8392	1.9118	2	0	2	87	54	100	111	352	0.24	0.16	0.29	0.32	0	0.61	0.8778	0.2467	0.7953	1.9452	363	256	64	68	182	1492	99	53	267	284	25	571	32	868	101	468	42	567	672	58	845	250	1132	139	559	769	46	98	55	193	606	56	1724	96	80	2165	495	437	597	1552	358	737	110	1199	74	66	537	42	118	29	548	1248	33	20	27	69	17	595	656	127	89	10	47	259
GCF_019599515.1	NZ_RKLW01000007	NZ_RKLW01000007.1	Halomicroarcula pellucida strain CECT 7537 NODE_7_length_49581_cov_39.878958; whole genome shotgun sequence.	7829	10001	15702	16049	49581	0.16	0.2	0.32	0.32	0.64	0.9122	0.1327	0.8806	1.9384	15	70	85	9194	6628	14384	14378	44584	0.21	0.15	0.32	0.33	0.64	0.8729	0.2197	0.8134	1.9248	233	15	69	84	9036	6512	14155	14130	43833	0.21	0.15	0.32	0.32	0	0.64	0.8729	0.22	0.8132	1.9246	232	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	238	287	30	117	151	952	176	33	141	249	28	334	42	427	95	388	54	197	348	28	364	226	541	229	498	289	39	42	29	109	462	57	788	26	70	1356	310	193	357	616	193	471	76	659	120	60	173	18	83	46	275	417	5	35	20	86	9	241	320	101	88	9	66	124
GCF_019599515.1	NZ_RKLW01000008	NZ_RKLW01000008.1	Halomicroarcula pellucida strain CECT 7537 NODE_8_length_2569_cov_55.339476; whole genome shotgun sequence.	516	353	905	795	2569	0.2	0.14	0.35	0.31	0.66	0.8814	0.2523	0.7813	1.9125	2	0	2	517	353	905	795	2570	0.21	0.14	0.35	0.3	0.65	0.8847	0.2552	0.7789	1.9202	1	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0