GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_900114435.1	NZ_FOZK01000006	NZ_FOZK01000006.1	Halomicrobium zhouii strain CGMCC 1.10457; whole genome shotgun sequence.	21170	22711	45348	45118	0	134347	0.16	0.17	0.34	0.34	0.67	0.915	0.0377	0.9635	1.9111	67	74	141	19335	16374	38681	37859	112249	0.17	0.15	0.34	0.34	0.68	0.8692	0.2012	0.828	1.8947	72	64	73	137	19198	16254	38434	37618	111504	0.17	0.15	0.34	0.34	0.68	0.869	0.2013	0.8281	1.8941	72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	24	26	51	49	150	0.16	0.19	0.33	0.33	0	0.66	0.8746	0.2766	0.7622	1.9023	1	1	24	21	39	38	122	0.2	0.17	0.32	0.31	0	0.63	0.8682	0.0797	0.9247	1.9485	597	431	72	69	220	2269	145	62	436	504	53	769	58	1184	114	788	60	764	1187	51	1266	364	1725	224	921	1043	49	79	52	289	1184	67	2642	83	73	3021	723	686	980	2018	531	983	90	1806	160	117	777	51	105	25	770	1744	22	40	91	113	34	861	980	138	54	23	80	251
GCF_900114435.1	NZ_FOZK01000005	NZ_FOZK01000005.1	Halomicrobium zhouii strain CGMCC 1.10457; whole genome shotgun sequence.	41170	41404	87344	87860	0	257778	0.16	0.16	0.34	0.34	0.68	0.9105	0.0058	0.9942	1.9047	116	137	253	37760	31989	77694	75702	223145	0.17	0.15	0.34	0.34	0.68	0.8676	0.1974	0.8311	1.89	89	111	135	246	37003	31414	76728	74554	219699	0.17	0.15	0.34	0.34	0.68	0.867	0.1985	0.8303	1.8886	89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	1	4	58	56	86	97	297	0.2	0.19	0.29	0.33	0	0.62	0.8883	0.111	0.9001	1.9557	2	2	602	438	626	799	2465	0.25	0.18	0.25	0.32	0	0.58	0.9168	0.2895	0.7491	1.9673	1243	905	122	191	407	4803	263	129	982	909	89	1438	112	2120	189	1433	83	1503	2378	101	2687	581	3383	301	1779	2182	77	143	106	452	2192	108	5359	144	134	6121	1334	1375	1752	4420	1044	2141	200	3879	278	194	1468	76	167	57	1462	3220	25	69	169	174	80	1788	1763	254	84	25	141	445
GCF_900114435.1	NZ_FOZK01000004	NZ_FOZK01000004.1	Halomicrobium zhouii strain CGMCC 1.10457; whole genome shotgun sequence.	46626	46268	82538	84779	0	260211	0.18	0.18	0.32	0.33	0.64	0.9369	0.0172	0.9829	1.9401	123	150	273	37453	32862	68145	67052	205512	0.18	0.16	0.33	0.33	0.65	0.8727	0.2168	0.8182	1.9099	272	122	147	269	37099	32484	67352	66249	203184	0.18	0.16	0.33	0.33	0.65	0.873	0.2167	0.8181	1.9103	272	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1159	796	235	267	545	3743	403	254	845	884	218	1564	219	2075	329	1289	155	1393	2062	170	2376	653	3245	704	1729	1735	156	281	257	585	2160	235	4519	187	275	4970	1300	1113	1654	3033	1013	1595	356	2888	283	338	1437	131	220	129	1442	2818	82	114	170	295	67	1565	1651	363	235	45	157	562
GCF_900114435.1	NZ_FOZK01000003	NZ_FOZK01000003.1	Halomicrobium zhouii strain CGMCC 1.10457; whole genome shotgun sequence.	113562	111496	224320	225084	0	674462	0.17	0.17	0.33	0.33	0.67	0.9213	0.0109	0.9892	1.9186	344	353	697	105701	87751	202172	197736	593360	0.18	0.15	0.34	0.33	0.67	0.8727	0.1972	0.8313	1.9047	371	332	341	673	103916	86275	199103	194731	584025	0.18	0.15	0.34	0.33	0.67	0.8725	0.1988	0.8301	1.9038	363	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	47	41	104	120	312	0.15	0.13	0.33	0.38	0	0.72	0.875	0.1396	0.8695	1.8546	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9	7	16	218	235	384	407	1244	0.17	0.19	0.31	0.33	0	0.64	0.871	0.1646	0.8543	1.9317	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3423	2595	456	608	1383	12053	976	447	2611	2122	286	4798	336	5789	699	3991	352	3813	6205	291	6069	2012	9543	1139	4662	4948	285	528	314	1580	5998	419	13896	503	475	16251	3824	3358	4665	10482	2722	5249	726	9349	805	737	3850	272	549	152	3837	8497	128	258	524	607	162	4185	4708	879	343	106	405	1440
GCF_900114435.1	NZ_FOZK01000002	NZ_FOZK01000002.1	Halomicrobium zhouii strain CGMCC 1.10457; whole genome shotgun sequence.	226004	225333	427110	425441	0	1303888	0.17	0.17	0.33	0.33	0.65	0.9317	0.0034	0.9966	1.9306	656	587	1243	203298	167016	368169	363089	1101572	0.18	0.16	0.33	0.33	0.66	0.8745	0.1968	0.8312	1.9067	769	628	575	1203	200634	164529	363802	358499	1087464	0.18	0.15	0.33	0.33	0.66	0.8742	0.198	0.8303	1.9058	757	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	74	34	123	135	366	0.2	0.09	0.34	0.37	0	0.7	0.8634	0.4169	0.6853	1.8442	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20	6	26	358	366	591	652	1967	0.18	0.19	0.3	0.33	0	0.63	0.8687	0.1467	0.8701	1.9399	2	2	672	492	699	872	2735	0.25	0.18	0.26	0.32	0	0.57	0.9209	0.2676	0.766	1.9708	5780	4868	961	1456	3073	21808	1925	1282	4696	4620	1010	8803	993	10989	1533	7604	858	7105	11017	849	11209	3758	16572	3502	8919	9825	686	1197	1001	2976	10937	1016	23595	937	1324	29214	6831	6155	8818	18059	4974	9406	1661	16860	1407	1646	7284	630	1047	521	7479	15010	391	595	1069	1504	313	7926	8437	1774	972	178	712	2931
GCF_900114435.1	NZ_FOZK01000001	NZ_FOZK01000001.1	Halomicrobium zhouii strain CGMCC 1.10457; whole genome shotgun sequence.	265526	274047	540130	538765	1176	1619644	0.16	0.17	0.33	0.33	0.67	0.9259	0.0171	0.9832	1.9179	784	750	1534	240365	205159	472441	459226	1377191	0.18	0.15	0.34	0.33	0.67	0.8711	0.2028	0.8272	1.8961	960	771	738	1509	237831	203158	468318	455045	1364352	0.18	0.15	0.34	0.33	0.67	0.8709	0.2024	0.8274	1.8955	960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7	7	14	186	222	306	343	1057	0.18	0.21	0.29	0.33	0	0.62	0.8787	0.1911	0.8366	1.9439	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7490	5464	968	1458	3206	27138	2090	1107	5982	5500	815	9645	886	13843	1667	9808	887	9447	14391	908	15358	4605	21419	2726	10993	13254	638	1330	948	3369	13998	907	31974	1063	1108	36693	8368	8167	11276	25152	6516	11987	1536	22921	1737	1660	9374	582	1273	448	9409	20198	328	559	1149	1342	375	9884	10737	1751	889	208	925	2950