Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_024227995.1 | NZ_CP100465 | NZ_CP100465.1 | Halomicrococcus gelatinilyticus strain GSLN9 chromosome; complete genome. | 458065 | 463016 | 973058 | 976511 | 0 | 2870650 | 0.16 | 0.16 | 0.34 | 0.34 | 0 | 0.68 | 0.9216 | 0.0071 | 0.9929 | 1.9053 | 1519 | 1508 | 3027 | 425124 | 352746 | 860828 | 850077 | 0 | 2488775 | 0.17 | 0.15 | 0.34 | 0.34 | 0 | 0.68 | 0.8651 | 0.2077 | 0.8237 | 1.8866 | 2004 | 1463 | 1472 | 2935 | 417912 | 346812 | 847988 | 836863 | 0 | 2449575 | 0.17 | 0.14 | 0.34 | 0.34 | 0 | 0.68 | 0.8647 | 0.2088 | 0.8229 | 1.8854 | 1896 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 1 | 2 | 124 | 91 | 228 | 261 | 0 | 704 | 0.17 | 0.13 | 0.32 | 0.37 | 0 | 0.69 | 0.8757 | 0.2169 | 0.8163 | 1.878 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 30 | 18 | 48 | 656 | 722 | 1076 | 1177 | 0 | 3631 | 0.18 | 0.2 | 0.3 | 0.32 | 0 | 0.62 | 0.8763 | 0.1705 | 0.8502 | 1.9428 | 0 | 3 | 0 | 3 | 1091 | 786 | 1189 | 1443 | 0 | 4509 | 0.22 | 0.17 | 0.3 | 0.32 | 0 | 0.61 | 0.9074 | 0.2275 | 0.7977 | 1.945 | 0 | 14746 | 13322 | 1481 | 1291 | 5144 | 53462 | 3005 | 1116 | 9150 | 9211 | 865 | 14036 | 880 | 25873 | 1912 | 17365 | 749 | 19729 | 26656 | 571 | 27334 | 6562 | 40672 | 2520 | 18691 | 22856 | 927 | 1570 | 953 | 5631 | 23057 | 1468 | 58818 | 1867 | 1296 | 68469 | 15332 | 13347 | 20582 | 39964 | 13150 | 28264 | 2113 | 42646 | 3826 | 2195 | 14771 | 688 | 1506 | 809 | 16259 | 43515 | 237 | 812 | 1547 | 1610 | 874 | 16671 | 21655 | 2949 | 1219 | 378 | 1683 | 4668 |
GCF_024227995.1 | NZ_CP100466 | NZ_CP100466.1 | Halomicrococcus gelatinilyticus strain GSLN9 plasmid unnamed1; complete sequence. | 65958 | 66757 | 139074 | 140913 | 0 | 412702 | 0.16 | 0.16 | 0.34 | 0.34 | 0 | 0.68 | 0.9136 | 0.0126 | 0.9875 | 1.9061 | 210 | 199 | 409 | 58326 | 52082 | 121499 | 120202 | 0 | 352109 | 0.17 | 0.15 | 0.34 | 0.34 | 0 | 0.68 | 0.8659 | 0.1994 | 0.8294 | 1.8852 | 153 | 209 | 193 | 402 | 56907 | 50969 | 119658 | 118084 | 0 | 345618 | 0.17 | 0.15 | 0.34 | 0.34 | 0 | 0.68 | 0.8656 | 0.1999 | 0.8292 | 1.8846 | 149 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 3 | 3 | 1098 | 789 | 1189 | 1432 | 0 | 4508 | 0.22 | 0.17 | 0.3 | 0.32 | 0 | 0.61 | 0.9078 | 0.2253 | 0.7995 | 1.9464 | 0 | 1987 | 1492 | 217 | 198 | 780 | 6677 | 511 | 165 | 1286 | 1393 | 135 | 1921 | 147 | 3954 | 288 | 2364 | 133 | 2849 | 3958 | 116 | 3995 | 1030 | 6050 | 420 | 2532 | 3169 | 139 | 253 | 142 | 907 | 3117 | 265 | 8397 | 279 | 245 | 8999 | 2100 | 1784 | 2968 | 5549 | 1786 | 3562 | 272 | 5802 | 560 | 323 | 2447 | 112 | 244 | 137 | 2490 | 6364 | 49 | 138 | 288 | 249 | 106 | 2525 | 3189 | 424 | 209 | 37 | 259 | 723 |
GCF_024227995.1 | NZ_CP100467 | NZ_CP100467.1 | Halomicrococcus gelatinilyticus strain GSLN9 plasmid unnamed2; complete sequence. | 58227 | 56486 | 122209 | 121943 | 0 | 358865 | 0.16 | 0.16 | 0.34 | 0.34 | 0 | 0.68 | 0.9135 | 0.0163 | 0.984 | 1.904 | 163 | 154 | 317 | 51001 | 44445 | 105656 | 104628 | 0 | 305730 | 0.17 | 0.15 | 0.34 | 0.34 | 0 | 0.68 | 0.8673 | 0.1977 | 0.8315 | 1.8882 | 217 | 163 | 153 | 316 | 50900 | 44384 | 105519 | 104483 | 0 | 305286 | 0.17 | 0.15 | 0.34 | 0.34 | 0 | 0.68 | 0.8673 | 0.1975 | 0.8316 | 1.8881 | 217 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1747 | 1447 | 165 | 130 | 689 | 5907 | 352 | 90 | 1213 | 1267 | 73 | 1670 | 97 | 3633 | 277 | 2121 | 71 | 2485 | 3471 | 52 | 3377 | 842 | 5372 | 316 | 2337 | 2897 | 83 | 235 | 125 | 877 | 2910 | 177 | 7429 | 274 | 143 | 8189 | 2024 | 1557 | 2673 | 4676 | 1539 | 2831 | 228 | 4991 | 470 | 286 | 2302 | 83 | 223 | 118 | 2353 | 5502 | 24 | 92 | 293 | 199 | 66 | 2313 | 2943 | 393 | 122 | 24 | 226 | 671 |
GCF_024227995.1 | NZ_CP100468 | NZ_CP100468.1 | Halomicrococcus gelatinilyticus strain GSLN9 plasmid unnamed3; complete sequence. | 12979 | 13530 | 26435 | 26816 | 0 | 79760 | 0.16 | 0.17 | 0.33 | 0.34 | 0 | 0.67 | 0.9119 | 0.0279 | 0.9725 | 1.9172 | 28 | 39 | 67 | 10874 | 8912 | 22014 | 21104 | 0 | 62904 | 0.18 | 0.14 | 0.34 | 0.33 | 0 | 0.68 | 0.8653 | 0.213 | 0.8192 | 1.8905 | 30 | 28 | 38 | 66 | 10809 | 8856 | 21888 | 20970 | 0 | 62523 | 0.18 | 0.14 | 0.34 | 0.33 | 0 | 0.68 | 0.8652 | 0.2147 | 0.818 | 1.8904 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 311 | 346 | 32 | 48 | 117 | 1140 | 72 | 19 | 271 | 270 | 10 | 348 | 24 | 761 | 45 | 525 | 13 | 470 | 654 | 12 | 702 | 167 | 1028 | 71 | 503 | 688 | 17 | 48 | 18 | 178 | 542 | 33 | 1498 | 47 | 43 | 1726 | 389 | 309 | 621 | 970 | 362 | 686 | 53 | 937 | 108 | 56 | 436 | 16 | 24 | 22 | 547 | 1004 | 5 | 15 | 61 | 27 | 22 | 501 | 604 | 76 | 31 | 7 | 37 | 118 |