| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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| GCF_000217715.1 | NC_015666 | NC_015666.1 | Halopiger xanaduensis SH-6; complete sequence. | 624889 | 622902 | 1209106 | 1211112 | 0 | 3668009 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.66 | 0.9254 | 0.0024 | 0.9976 | 1.925 | 1792 | 1844 | 3636 | 574567 | 471494 | 1063423 | 1055025 | 0 | 3164509 | 0.18 | 0.15 | 0.33 | 0.33 | 0 | 0.66 | 0.8697 | 0.2008 | 0.8292 | 1.9055 | 1521 | 1742 | 1786 | 3528 | 563328 | 461697 | 1044636 | 1035693 | 0 | 3105354 | 0.18 | 0.15 | 0.33 | 0.33 | 0 | 0.66 | 0.8694 | 0.2014 | 0.8287 | 1.9049 | 1478 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 1 | 2 | 141 | 91 | 292 | 308 | 0 | 832 | 0.17 | 0.11 | 0.35 | 0.37 | 0 | 0.72 | 0.8721 | 0.2378 | 0.7998 | 1.8469 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 21 | 29 | 50 | 676 | 754 | 1117 | 1231 | 0 | 3778 | 0.18 | 0.2 | 0.29 | 0.33 | 0 | 0.62 | 0.8732 | 0.1817 | 0.8419 | 1.943 | 0 | 6 | 4 | 10 | 3334 | 2453 | 3559 | 4306 | 0 | 13652 | 0.22 | 0.17 | 0.29 | 0.31 | 0 | 0.6 | 0.9071 | 0.2298 | 0.796 | 1.9561 | 0 | 17062 | 13281 | 2564 | 2477 | 6405 | 72904 | 4611 | 3988 | 11459 | 11415 | 2329 | 25708 | 1407 | 31636 | 3005 | 21637 | 1330 | 16268 | 30009 | 2952 | 30072 | 7363 | 51595 | 14568 | 21680 | 28226 | 1510 | 3889 | 2174 | 8417 | 38491 | 2933 | 64123 | 928 | 1763 | 76576 | 18282 | 17546 | 25644 | 49598 | 14888 | 30621 | 4096 | 53167 | 4589 | 5866 | 17344 | 856 | 2737 | 1150 | 24257 | 52692 | 1258 | 1099 | 1089 | 1540 | 781 | 23110 | 27595 | 2959 | 3671 | 1044 | 1703 | 9181 |
| GCF_000217715.1 | NC_015658 | NC_015658.1 | Halopiger xanaduensis SH-6 plasmid pHALXA01; complete sequence. | 84314 | 83682 | 134306 | 134416 | 0 | 436718 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.62 | 0.9312 | 0.0042 | 0.9958 | 1.9613 | 186 | 154 | 340 | 68652 | 57994 | 109503 | 110537 | 0 | 346686 | 0.2 | 0.17 | 0.31 | 0.31 | 0 | 0.62 | 0.8857 | 0.1719 | 0.8498 | 1.9395 | 189 | 181 | 151 | 332 | 67023 | 56724 | 106823 | 107908 | 0 | 338478 | 0.2 | 0.17 | 0.31 | 0.31 | 0 | 0.62 | 0.8856 | 0.1724 | 0.8495 | 1.9393 | 188 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2013 | 1245 | 464 | 456 | 1038 | 6767 | 756 | 757 | 1193 | 1725 | 513 | 3223 | 313 | 3776 | 526 | 2498 | 262 | 1785 | 3362 | 534 | 2718 | 1117 | 5154 | 2311 | 2300 | 2618 | 329 | 633 | 561 | 1353 | 4356 | 609 | 5951 | 261 | 338 | 7450 | 2130 | 1638 | 3065 | 4127 | 1537 | 2521 | 735 | 4601 | 442 | 1009 | 1996 | 182 | 388 | 286 | 2693 | 4873 | 239 | 223 | 161 | 328 | 71 | 2246 | 3257 | 500 | 682 | 98 | 163 | 1370 |
| GCF_000217715.1 | NC_015667 | NC_015667.1 | Halopiger xanaduensis SH-6 plasmid pHALXA02; complete sequence. | 37948 | 36586 | 53385 | 53859 | 0 | 181778 | 0.21 | 0.2 | 0.29 | 0.3 | 0 | 0.59 | 0.9459 | 0.0227 | 0.9777 | 1.9764 | 114 | 72 | 186 | 29094 | 24842 | 40693 | 42066 | 0 | 136695 | 0.21 | 0.18 | 0.3 | 0.31 | 0 | 0.6 | 0.8895 | 0.1776 | 0.8458 | 1.951 | 77 | 112 | 71 | 183 | 28607 | 24473 | 39994 | 41359 | 0 | 134433 | 0.21 | 0.18 | 0.3 | 0.31 | 0 | 0.6 | 0.8896 | 0.1778 | 0.8456 | 1.951 | 73 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 779 | 556 | 286 | 341 | 701 | 2475 | 475 | 439 | 412 | 511 | 329 | 1484 | 252 | 1358 | 299 | 846 | 182 | 693 | 1154 | 271 | 943 | 623 | 1977 | 1261 | 900 | 915 | 209 | 288 | 312 | 688 | 1503 | 445 | 2243 | 131 | 330 | 2532 | 765 | 539 | 996 | 1370 | 563 | 839 | 347 | 1411 | 171 | 603 | 743 | 103 | 183 | 196 | 883 | 1679 | 112 | 178 | 87 | 346 | 40 | 843 | 1089 | 350 | 371 | 50 | 93 | 718 |
| GCF_000217715.1 | NC_015659 | NC_015659.1 | Halopiger xanaduensis SH-6 plasmid pHALXA03; complete sequence. | 12969 | 13057 | 21481 | 21256 | 0 | 68763 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.62 | 0.9265 | 0.0086 | 0.9914 | 1.957 | 43 | 55 | 98 | 13281 | 9815 | 19417 | 19389 | 0 | 61902 | 0.21 | 0.16 | 0.31 | 0.32 | 0 | 0.63 | 0.8799 | 0.2063 | 0.825 | 1.936 | 255 | 43 | 55 | 98 | 13281 | 9815 | 19417 | 19389 | 0 | 61902 | 0.21 | 0.16 | 0.31 | 0.32 | 0 | 0.63 | 0.8799 | 0.2063 | 0.825 | 1.936 | 255 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 324 | 297 | 51 | 75 | 223 | 1211 | 109 | 167 | 186 | 328 | 113 | 641 | 83 | 661 | 115 | 503 | 49 | 310 | 504 | 68 | 445 | 183 | 882 | 490 | 465 | 479 | 58 | 96 | 131 | 148 | 655 | 129 | 910 | 27 | 137 | 1521 | 368 | 261 | 578 | 722 | 260 | 599 | 246 | 907 | 130 | 173 | 316 | 26 | 87 | 70 | 526 | 773 | 19 | 43 | 22 | 99 | 19 | 409 | 570 | 112 | 208 | 30 | 49 | 238 |