Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_024298865.1 | NZ_CP101161 | NZ_CP101161.1 | Halorarius halobius strain ZY10 chromosome; complete genome. | 594429 | 587631 | 1278998 | 1282116 | 0 | 3743174 | 0.16 | 0.16 | 0.34 | 0.34 | 0 | 0.68 | 0.9086 | 0.007 | 0.9931 | 1.8997 | 1959 | 1965 | 3924 | 555600 | 492833 | 1156404 | 1173805 | 0 | 3378642 | 0.16 | 0.15 | 0.34 | 0.35 | 0 | 0.69 | 0.8647 | 0.1889 | 0.8394 | 1.8797 | 2952 | 1922 | 1926 | 3848 | 550043 | 488033 | 1146327 | 1163432 | 0 | 3347835 | 0.16 | 0.15 | 0.34 | 0.35 | 0 | 0.69 | 0.8644 | 0.1894 | 0.8391 | 1.8788 | 2868 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2 | 0 | 2 | 123 | 78 | 247 | 254 | 0 | 702 | 0.17 | 0.11 | 0.35 | 0.36 | 0 | 0.71 | 0.8594 | 0.2234 | 0.8246 | 1.8504 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 21 | 25 | 46 | 632 | 668 | 1042 | 1142 | 0 | 3484 | 0.18 | 0.19 | 0.3 | 0.33 | 0 | 0.63 | 0.8736 | 0.1537 | 0.8629 | 1.9416 | 0 | 3 | 0 | 3 | 1072 | 782 | 1181 | 1467 | 0 | 4502 | 0.23 | 0.17 | 0.29 | 0.32 | 0 | 0.6 | 0.906 | 0.2495 | 0.7798 | 1.9559 | 0 | 18185 | 13625 | 2366 | 2170 | 6584 | 71338 | 4123 | 2583 | 11809 | 12495 | 1370 | 17901 | 1539 | 35720 | 2514 | 22743 | 1127 | 33403 | 35155 | 1744 | 37538 | 8762 | 53201 | 5189 | 22939 | 31635 | 1701 | 4518 | 2795 | 6165 | 27507 | 3419 | 70871 | 3923 | 2276 | 87595 | 19559 | 21415 | 27025 | 57834 | 13931 | 32882 | 4278 | 59962 | 3681 | 3517 | 25192 | 950 | 3976 | 2181 | 25885 | 62719 | 613 | 1253 | 1455 | 2505 | 1087 | 29506 | 29579 | 4856 | 2634 | 542 | 2219 | 6181 |
GCF_024298865.1 | NZ_CP101162 | NZ_CP101162.1 | Halorarius halobius strain ZY10 plasmid unnamed1; complete sequence. | 60948 | 59123 | 83914 | 84234 | 0 | 288219 | 0.21 | 0.21 | 0.29 | 0.29 | 0 | 0.58 | 0.9453 | 0.0171 | 0.9831 | 1.9798 | 158 | 120 | 278 | 50237 | 46105 | 69862 | 70809 | 0 | 237013 | 0.21 | 0.2 | 0.29 | 0.3 | 0 | 0.59 | 0.8966 | 0.1828 | 0.8415 | 1.9619 | 209 | 153 | 118 | 271 | 49606 | 45499 | 69081 | 69997 | 0 | 234183 | 0.21 | 0.2 | 0.29 | 0.3 | 0 | 0.59 | 0.8969 | 0.182 | 0.8422 | 1.962 | 205 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 0 | 1 | 10 | 13 | 22 | 28 | 0 | 73 | 0.14 | 0.18 | 0.3 | 0.38 | 0 | 0.68 | 0.8747 | 0.2504 | 0.7775 | 1.8879 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1260 | 920 | 522 | 690 | 1424 | 3669 | 1135 | 825 | 796 | 1039 | 592 | 2431 | 533 | 2163 | 661 | 1432 | 415 | 1501 | 2275 | 526 | 1686 | 1240 | 3800 | 2162 | 1815 | 1648 | 355 | 563 | 641 | 1269 | 2764 | 832 | 3502 | 272 | 763 | 4019 | 1240 | 957 | 1622 | 2354 | 959 | 1180 | 646 | 2082 | 230 | 1041 | 1537 | 226 | 363 | 431 | 1392 | 2361 | 211 | 391 | 188 | 706 | 69 | 1558 | 1567 | 742 | 628 | 54 | 148 | 1038 |
GCF_024298865.1 | NZ_CP101163 | NZ_CP101163.1 | Halorarius halobius strain ZY10 plasmid unnamed2; complete sequence. | 33560 | 30915 | 44910 | 39341 | 0 | 148726 | 0.23 | 0.21 | 0.3 | 0.26 | 0 | 0.57 | 0.9464 | 0.1071 | 0.8986 | 1.9849 | 93 | 39 | 132 | 27418 | 22513 | 34873 | 31935 | 0 | 116739 | 0.24 | 0.19 | 0.3 | 0.27 | 0 | 0.57 | 0.8988 | 0.227 | 0.804 | 1.9664 | 76 | 87 | 39 | 126 | 24317 | 20134 | 30231 | 28050 | 0 | 102732 | 0.24 | 0.19 | 0.29 | 0.27 | 0 | 0.57 | 0.8988 | 0.2267 | 0.8043 | 1.967 | 76 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 544 | 560 | 221 | 403 | 570 | 1641 | 542 | 424 | 463 | 444 | 359 | 1369 | 320 | 780 | 311 | 767 | 248 | 401 | 878 | 255 | 444 | 504 | 1675 | 1025 | 805 | 769 | 141 | 201 | 342 | 468 | 1190 | 454 | 1302 | 151 | 384 | 1862 | 606 | 438 | 788 | 895 | 379 | 636 | 380 | 768 | 150 | 470 | 494 | 111 | 138 | 227 | 523 | 808 | 114 | 213 | 70 | 370 | 37 | 515 | 607 | 364 | 401 | 41 | 48 | 436 |
GCF_024298865.1 | NZ_CP101164 | NZ_CP101164.1 | Halorarius halobius strain ZY10 plasmid unnamed3; complete sequence. | 37376 | 34919 | 49240 | 45966 | 0 | 167501 | 0.22 | 0.21 | 0.29 | 0.27 | 0 | 0.57 | 0.9445 | 0.0684 | 0.9339 | 1.9856 | 81 | 49 | 130 | 34651 | 27461 | 42002 | 41455 | 0 | 145569 | 0.23 | 0.19 | 0.29 | 0.28 | 0 | 0.58 | 0.9029 | 0.2017 | 0.824 | 1.9664 | 314 | 80 | 49 | 129 | 34590 | 27408 | 41920 | 41390 | 0 | 145308 | 0.23 | 0.19 | 0.29 | 0.29 | 0 | 0.58 | 0.9029 | 0.2018 | 0.8239 | 1.9663 | 314 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 686 | 831 | 291 | 431 | 794 | 2672 | 717 | 566 | 578 | 655 | 441 | 2053 | 415 | 1052 | 428 | 1043 | 374 | 672 | 1250 | 287 | 696 | 698 | 2151 | 1532 | 1146 | 1060 | 257 | 342 | 471 | 676 | 1622 | 530 | 1739 | 166 | 505 | 2776 | 826 | 743 | 1115 | 1332 | 589 | 818 | 596 | 999 | 171 | 611 | 908 | 175 | 200 | 316 | 788 | 1072 | 141 | 312 | 132 | 475 | 35 | 797 | 805 | 571 | 526 | 38 | 56 | 686 |
GCF_024298865.1 | NZ_CP101165 | NZ_CP101165.1 | Halorarius halobius strain ZY10 plasmid unnamed4; complete sequence. | 10519 | 10119 | 15521 | 15556 | 0 | 51715 | 0.2 | 0.2 | 0.3 | 0.3 | 0 | 0.6 | 0.9293 | 0.0205 | 0.9799 | 1.9703 | 33 | 24 | 57 | 8966 | 7771 | 13055 | 13315 | 0 | 43107 | 0.21 | 0.18 | 0.3 | 0.3 | 0 | 0.6 | 0.8917 | 0.1783 | 0.845 | 1.9565 | 87 | 33 | 23 | 56 | 8897 | 7711 | 12948 | 13203 | 0 | 42759 | 0.21 | 0.18 | 0.3 | 0.3 | 0 | 0.6 | 0.8919 | 0.1798 | 0.8438 | 1.9566 | 87 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 255 | 198 | 44 | 110 | 207 | 798 | 170 | 120 | 153 | 222 | 105 | 420 | 99 | 405 | 100 | 279 | 56 | 263 | 408 | 62 | 341 | 177 | 684 | 305 | 404 | 309 | 63 | 81 | 106 | 187 | 493 | 108 | 674 | 43 | 94 | 835 | 213 | 173 | 344 | 478 | 177 | 283 | 115 | 440 | 56 | 159 | 285 | 27 | 66 | 59 | 264 | 457 | 22 | 57 | 22 | 91 | 10 | 295 | 319 | 136 | 96 | 19 | 27 | 185 |