Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_023028345.1 | NZ_CP095487 | NZ_CP095487.1 | Halorientalis marina strain GDY88 chromosome; complete genome. | 606313 | 602746 | 1233969 | 1232193 | 0 | 3675221 | 0.16 | 0.16 | 0.34 | 0.34 | 0 | 0.67 | 0.9233 | 0.0037 | 0.9963 | 1.9139 | 1976 | 1813 | 3789 | 571511 | 478534 | 1110088 | 1095577 | 0 | 3255710 | 0.18 | 0.15 | 0.34 | 0.34 | 0 | 0.67 | 0.8703 | 0.2052 | 0.8248 | 1.8935 | 2201 | 1921 | 1775 | 3696 | 563808 | 471549 | 1096045 | 1081427 | 0 | 3212829 | 0.18 | 0.15 | 0.34 | 0.34 | 0 | 0.67 | 0.87 | 0.206 | 0.8242 | 1.8928 | 2087 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2 | 0 | 2 | 129 | 89 | 252 | 274 | 0 | 744 | 0.17 | 0.12 | 0.34 | 0.37 | 0 | 0.71 | 0.8721 | 0.2037 | 0.8326 | 1.8612 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 32 | 21 | 53 | 713 | 781 | 1241 | 1338 | 0 | 4073 | 0.18 | 0.19 | 0.3 | 0.33 | 0 | 0.63 | 0.8708 | 0.1664 | 0.8558 | 1.9336 | 0 | 3 | 0 | 3 | 1067 | 793 | 1188 | 1466 | 0 | 4514 | 0.22 | 0.16 | 0.3 | 0.33 | 0 | 0.62 | 0.8988 | 0.2509 | 0.7794 | 1.9361 | 0 | 18248 | 12078 | 2468 | 2916 | 8897 | 66899 | 4765 | 3224 | 12412 | 11767 | 2019 | 22788 | 2046 | 32594 | 3999 | 21453 | 1131 | 23545 | 32264 | 2466 | 32674 | 10129 | 53542 | 8574 | 23281 | 31765 | 1246 | 3379 | 2383 | 7089 | 35570 | 2436 | 68404 | 1437 | 3484 | 84478 | 19452 | 19501 | 25261 | 57924 | 14541 | 29082 | 5741 | 52047 | 3062 | 4235 | 24986 | 1191 | 4466 | 1308 | 20329 | 50383 | 619 | 1219 | 2006 | 3212 | 692 | 27645 | 26924 | 5241 | 2432 | 459 | 2545 | 6590 |
GCF_023028345.1 | NZ_CP095488 | NZ_CP095488.1 | Halorientalis marina strain GDY88 plasmid unnamed1; complete sequence. | 80649 | 79722 | 130318 | 130236 | 0 | 420925 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.62 | 0.9343 | 0.0061 | 0.9939 | 1.9587 | 171 | 205 | 376 | 65901 | 56448 | 104439 | 105437 | 0 | 332225 | 0.2 | 0.17 | 0.31 | 0.32 | 0 | 0.63 | 0.8879 | 0.1918 | 0.8346 | 1.9378 | 246 | 170 | 202 | 372 | 64899 | 55684 | 103186 | 104053 | 0 | 327822 | 0.2 | 0.17 | 0.31 | 0.32 | 0 | 0.63 | 0.8878 | 0.1919 | 0.8346 | 1.9377 | 247 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1777 | 1128 | 472 | 687 | 1620 | 5658 | 1064 | 718 | 1143 | 1439 | 512 | 3183 | 462 | 3429 | 778 | 2097 | 334 | 2347 | 3023 | 502 | 3245 | 1533 | 5189 | 1952 | 2654 | 2835 | 289 | 656 | 529 | 1156 | 3832 | 565 | 5669 | 265 | 881 | 7051 | 1876 | 1508 | 2401 | 4252 | 1413 | 2192 | 814 | 3882 | 328 | 929 | 2320 | 237 | 493 | 345 | 2127 | 4148 | 160 | 293 | 268 | 689 | 61 | 2379 | 2631 | 837 | 655 | 67 | 249 | 1045 |
GCF_023028345.1 | NZ_CP095489 | NZ_CP095489.1 | Halorientalis marina strain GDY88 plasmid unnamed2; complete sequence. | 22858 | 20747 | 27373 | 28446 | 0 | 99424 | 0.23 | 0.21 | 0.28 | 0.29 | 0 | 0.56 | 0.9449 | 0.0676 | 0.935 | 1.9882 | 65 | 20 | 85 | 18589 | 15327 | 21887 | 22974 | 0 | 78777 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.8973 | 0.1925 | 0.8352 | 1.9648 | 47 | 65 | 20 | 85 | 18589 | 15327 | 21887 | 22974 | 0 | 78777 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.8973 | 0.1925 | 0.8352 | 1.9648 | 47 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 354 | 449 | 187 | 254 | 445 | 1504 | 381 | 359 | 269 | 350 | 301 | 1015 | 239 | 607 | 230 | 485 | 190 | 423 | 763 | 156 | 523 | 364 | 994 | 878 | 706 | 494 | 141 | 226 | 257 | 347 | 817 | 310 | 922 | 118 | 290 | 1379 | 406 | 292 | 576 | 606 | 330 | 402 | 268 | 588 | 96 | 341 | 409 | 119 | 114 | 188 | 449 | 700 | 98 | 129 | 81 | 253 | 27 | 524 | 524 | 275 | 312 | 25 | 33 | 367 |
GCF_023028345.1 | NZ_CP095490 | NZ_CP095490.1 | Halorientalis marina strain GDY88 plasmid unnamed3; complete sequence. | 117821 | 115114 | 160764 | 164868 | 0 | 558567 | 0.21 | 0.21 | 0.29 | 0.3 | 0 | 0.58 | 0.9476 | 0.0242 | 0.9761 | 1.9799 | 280 | 214 | 494 | 101232 | 82281 | 133366 | 135304 | 0 | 452183 | 0.22 | 0.18 | 0.29 | 0.3 | 0 | 0.59 | 0.8957 | 0.1961 | 0.8302 | 1.9576 | 482 | 276 | 210 | 486 | 99691 | 81047 | 131360 | 133336 | 0 | 445434 | 0.22 | 0.18 | 0.29 | 0.3 | 0 | 0.59 | 0.8956 | 0.1967 | 0.8297 | 1.9574 | 483 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2249 | 2198 | 730 | 1383 | 2257 | 8040 | 1903 | 1566 | 1615 | 1896 | 1168 | 5123 | 1023 | 3925 | 1338 | 3102 | 830 | 2563 | 4006 | 832 | 3095 | 2002 | 6202 | 4007 | 3771 | 3325 | 598 | 1014 | 1103 | 1825 | 4834 | 1346 | 6356 | 494 | 1421 | 9019 | 2600 | 1798 | 3290 | 4499 | 2049 | 2628 | 1531 | 4109 | 517 | 1662 | 2809 | 475 | 712 | 781 | 2694 | 4392 | 368 | 694 | 360 | 1317 | 118 | 2842 | 2962 | 1414 | 1436 | 125 | 247 | 1889 |