Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_008831545.1 | NZ_CP044523 | NZ_CP044523.1 | Halorussus halophilus strain ZS-3 chromosome; complete genome. | 696947 | 696266 | 1122280 | 1120759 | 0 | 3636252 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.62 | 0.9373 | 0.0012 | 0.9988 | 1.9602 | 1857 | 1812 | 3669 | 648052 | 515361 | 974066 | 985700 | 0 | 3123179 | 0.21 | 0.17 | 0.31 | 0.32 | 0 | 0.62 | 0.8835 | 0.2142 | 0.8182 | 1.9387 | 1918 | 1800 | 1761 | 3561 | 638421 | 506715 | 960210 | 971232 | 0 | 3076578 | 0.21 | 0.17 | 0.31 | 0.32 | 0 | 0.62 | 0.8834 | 0.2151 | 0.8175 | 1.9384 | 1751 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 2 | 0 | 2 | 170 | 95 | 250 | 269 | 0 | 784 | 0.21 | 0.12 | 0.32 | 0.35 | 0 | 0.66 | 0.8826 | 0.2939 | 0.7672 | 1.8988 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 22 | 27 | 49 | 682 | 767 | 1072 | 1183 | 0 | 3704 | 0.18 | 0.21 | 0.29 | 0.32 | 0 | 0.61 | 0.875 | 0.1762 | 0.846 | 1.9521 | 0 | 0 | 3 | 3 | 1153 | 834 | 1129 | 1397 | 0 | 4513 | 0.23 | 0.18 | 0.27 | 0.31 | 0 | 0.58 | 0.9151 | 0.2019 | 0.8207 | 1.9692 | 0 | 17922 | 15995 | 5893 | 6875 | 15628 | 53059 | 7919 | 8272 | 10431 | 12279 | 3902 | 38448 | 2611 | 30229 | 7470 | 24242 | 3873 | 23679 | 33019 | 2926 | 24846 | 14732 | 46274 | 8126 | 20269 | 24893 | 3452 | 8961 | 3673 | 12237 | 27287 | 4557 | 54804 | 3189 | 4777 | 73371 | 17809 | 13973 | 24867 | 36315 | 14563 | 24848 | 8434 | 43808 | 3711 | 7759 | 14546 | 2739 | 3495 | 2241 | 22435 | 43591 | 2023 | 2376 | 1446 | 5744 | 980 | 13312 | 22814 | 5791 | 8888 | 921 | 1660 | 14317 |
GCF_008831545.1 | NZ_CP044524 | NZ_CP044524.1 | Halorussus halophilus strain ZS-3 plasmid unnamed1; complete sequence. | 100157 | 101675 | 164732 | 165204 | 0 | 531768 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.62 | 0.9266 | 0.009 | 0.9911 | 1.9577 | 272 | 243 | 515 | 92681 | 77766 | 144670 | 146142 | 0 | 461259 | 0.2 | 0.17 | 0.31 | 0.32 | 0 | 0.63 | 0.8835 | 0.1979 | 0.8303 | 1.9409 | 300 | 267 | 238 | 505 | 91555 | 76858 | 142926 | 144469 | 0 | 455808 | 0.2 | 0.17 | 0.31 | 0.32 | 0 | 0.63 | 0.8837 | 0.1983 | 0.83 | 1.9407 | 228 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2511 | 1925 | 954 | 1105 | 2253 | 7248 | 1218 | 1137 | 1565 | 1965 | 612 | 5201 | 410 | 4873 | 1066 | 3495 | 574 | 3690 | 5093 | 508 | 3596 | 2112 | 7354 | 1028 | 2969 | 3594 | 557 | 1487 | 526 | 2055 | 3625 | 656 | 8445 | 518 | 726 | 10169 | 2607 | 1969 | 3852 | 4987 | 2079 | 3420 | 1156 | 6244 | 580 | 1136 | 2526 | 506 | 526 | 335 | 3675 | 6614 | 289 | 348 | 273 | 942 | 126 | 2262 | 3695 | 860 | 1305 | 124 | 255 | 2425 |
GCF_008831545.1 | NZ_CP044525 | NZ_CP044525.1 | Halorussus halophilus strain ZS-3 plasmid unnamed2; complete sequence. | 46813 | 45157 | 63558 | 63728 | 0 | 219256 | 0.21 | 0.21 | 0.29 | 0.29 | 0 | 0.58 | 0.9427 | 0.0193 | 0.981 | 1.9811 | 118 | 89 | 207 | 39786 | 32924 | 53663 | 52952 | 0 | 179325 | 0.23 | 0.19 | 0.29 | 0.29 | 0 | 0.59 | 0.8952 | 0.1927 | 0.834 | 1.9627 | 115 | 116 | 84 | 200 | 38747 | 31896 | 52389 | 51652 | 0 | 174684 | 0.23 | 0.19 | 0.3 | 0.29 | 0 | 0.59 | 0.8949 | 0.1942 | 0.833 | 1.9618 | 110 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1065 | 892 | 391 | 470 | 1104 | 2519 | 593 | 538 | 546 | 759 | 399 | 2088 | 365 | 1742 | 498 | 1396 | 280 | 1119 | 1822 | 245 | 1122 | 986 | 2637 | 900 | 1134 | 1245 | 318 | 479 | 352 | 897 | 1821 | 475 | 2823 | 258 | 472 | 3513 | 1002 | 765 | 1455 | 1637 | 683 | 1044 | 602 | 1767 | 224 | 616 | 958 | 150 | 298 | 217 | 1256 | 1908 | 181 | 190 | 113 | 598 | 57 | 843 | 1235 | 467 | 701 | 53 | 90 | 855 |
GCF_008831545.1 | NZ_CP044526 | NZ_CP044526.1 | Halorussus halophilus strain ZS-3 plasmid unnamed3; complete sequence. | 12674 | 12983 | 18503 | 19295 | 0 | 63455 | 0.2 | 0.2 | 0.29 | 0.3 | 0 | 0.6 | 0.9341 | 0.033 | 0.9676 | 1.9732 | 18 | 32 | 50 | 10900 | 8261 | 15328 | 15050 | 0 | 49539 | 0.23 | 0.16 | 0.31 | 0.3 | 0 | 0.61 | 0.888 | 0.2225 | 0.8127 | 1.9482 | 21 | 15 | 31 | 46 | 9799 | 7469 | 14236 | 13703 | 0 | 45207 | 0.22 | 0.16 | 0.31 | 0.3 | 0 | 0.61 | 0.8876 | 0.2224 | 0.8135 | 1.9472 | 17 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 3 | 0 | 3 | 1059 | 763 | 1041 | 1286 | 0 | 4149 | 0.23 | 0.18 | 0.28 | 0.31 | 0 | 0.59 | 0.9056 | 0.2073 | 0.8158 | 1.9634 | 0 | 260 | 284 | 66 | 141 | 214 | 701 | 115 | 115 | 131 | 144 | 52 | 537 | 37 | 486 | 133 | 402 | 74 | 276 | 502 | 21 | 382 | 276 | 698 | 113 | 353 | 422 | 57 | 120 | 54 | 178 | 446 | 84 | 744 | 46 | 66 | 1165 | 284 | 163 | 417 | 457 | 225 | 345 | 132 | 516 | 56 | 99 | 205 | 30 | 51 | 34 | 360 | 573 | 22 | 30 | 10 | 73 | 11 | 201 | 372 | 104 | 134 | 14 | 21 | 235 |