Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_029338375.1 | NZ_CP119804 | NZ_CP119804.1 | Halorussus lipolyticus strain DT80 chromosome; complete genome. | 603831 | 608626 | 1084545 | 1086851 | 0 | 3383853 | 0.18 | 0.18 | 0.32 | 0.32 | 0 | 0.64 | 0.9247 | 0.005 | 0.995 | 1.9413 | 1661 | 1743 | 3404 | 547561 | 445517 | 950209 | 942515 | 0 | 2885802 | 0.19 | 0.16 | 0.32 | 0.33 | 0 | 0.65 | 0.8762 | 0.2128 | 0.8198 | 1.9158 | 2014 | 1610 | 1697 | 3307 | 539409 | 438579 | 937441 | 928988 | 0 | 2844417 | 0.19 | 0.16 | 0.32 | 0.33 | 0 | 0.65 | 0.8761 | 0.2135 | 0.8193 | 1.9152 | 1935 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2 | 0 | 2 | 140 | 94 | 216 | 251 | 0 | 701 | 0.2 | 0.14 | 0.31 | 0.36 | 0 | 0.67 | 0.8817 | 0.264 | 0.7905 | 1.8996 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 27 | 22 | 49 | 668 | 745 | 1094 | 1203 | 0 | 3710 | 0.18 | 0.2 | 0.29 | 0.32 | 0 | 0.62 | 0.8709 | 0.1932 | 0.8328 | 1.9446 | 0 | 3 | 3 | 6 | 2251 | 1605 | 2344 | 2820 | 0 | 9020 | 0.23 | 0.18 | 0.28 | 0.31 | 0 | 0.59 | 0.9108 | 0.2085 | 0.8145 | 1.9637 | 0 | 16514 | 14855 | 3178 | 3934 | 7078 | 59881 | 4861 | 6979 | 10657 | 10976 | 2980 | 24995 | 1437 | 19723 | 4912 | 21686 | 2318 | 25843 | 29800 | 2290 | 26804 | 10849 | 43053 | 5712 | 18018 | 33786 | 1916 | 6010 | 2344 | 9267 | 25807 | 3273 | 51720 | 1931 | 2309 | 73247 | 16324 | 19143 | 23404 | 47915 | 13169 | 23009 | 6008 | 45352 | 4138 | 5542 | 16186 | 2092 | 2082 | 1358 | 23435 | 39404 | 1133 | 1433 | 1316 | 2091 | 956 | 19864 | 19930 | 2588 | 6149 | 732 | 1619 | 10824 |
GCF_029338375.1 | NZ_CP119805 | NZ_CP119805.1 | Halorussus lipolyticus strain DT80 plasmid unnamed1; complete sequence. | 75778 | 74517 | 140273 | 139655 | 0 | 430223 | 0.18 | 0.17 | 0.33 | 0.32 | 0 | 0.65 | 0.9212 | 0.0106 | 0.9895 | 1.9335 | 196 | 203 | 399 | 67620 | 57030 | 123577 | 123110 | 0 | 371337 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8747 | 0.1988 | 0.8296 | 1.9115 | 200 | 191 | 200 | 391 | 65245 | 55182 | 119159 | 118914 | 0 | 358500 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8746 | 0.1989 | 0.8295 | 1.9117 | 200 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1896 | 1524 | 334 | 427 | 886 | 7230 | 558 | 853 | 1301 | 1498 | 358 | 2933 | 175 | 2525 | 612 | 2579 | 252 | 3362 | 3855 | 326 | 3578 | 1167 | 5599 | 643 | 2216 | 4256 | 210 | 752 | 358 | 1255 | 2852 | 425 | 6586 | 249 | 253 | 8976 | 2046 | 2346 | 3080 | 6055 | 1669 | 2883 | 665 | 5765 | 607 | 693 | 2386 | 318 | 221 | 189 | 3012 | 5235 | 139 | 162 | 242 | 276 | 108 | 2923 | 2794 | 262 | 730 | 74 | 209 | 1552 |
GCF_029338375.1 | NZ_CP119806 | NZ_CP119806.1 | Halorussus lipolyticus strain DT80 plasmid unnamed2; complete sequence. | 19704 | 19898 | 23818 | 23605 | 0 | 87025 | 0.23 | 0.23 | 0.27 | 0.27 | 0 | 0.54 | 0.9452 | 0.0094 | 0.9907 | 1.9942 | 29 | 44 | 73 | 17442 | 13731 | 19187 | 19405 | 0 | 69765 | 0.25 | 0.2 | 0.27 | 0.28 | 0 | 0.55 | 0.8998 | 0.2057 | 0.8219 | 1.9746 | 74 | 24 | 44 | 68 | 16923 | 13231 | 18479 | 18672 | 0 | 67305 | 0.25 | 0.2 | 0.27 | 0.28 | 0 | 0.55 | 0.9007 | 0.2066 | 0.8212 | 1.975 | 74 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 298 | 378 | 171 | 267 | 460 | 1146 | 279 | 371 | 205 | 285 | 329 | 880 | 228 | 537 | 264 | 461 | 177 | 281 | 606 | 193 | 279 | 347 | 861 | 676 | 483 | 449 | 149 | 167 | 230 | 336 | 563 | 306 | 758 | 117 | 343 | 1235 | 343 | 224 | 476 | 463 | 275 | 333 | 347 | 481 | 69 | 339 | 330 | 78 | 104 | 146 | 365 | 544 | 92 | 125 | 50 | 299 | 20 | 392 | 395 | 262 | 355 | 23 | 25 | 365 |
GCF_029338375.1 | NZ_CP119807 | NZ_CP119807.1 | Halorussus lipolyticus strain DT80 plasmid unnamed3; complete sequence. | 20058 | 21849 | 30592 | 30108 | 0 | 102607 | 0.2 | 0.21 | 0.3 | 0.29 | 0 | 0.59 | 0.942 | 0.0507 | 0.9511 | 1.9751 | 38 | 31 | 69 | 17906 | 14374 | 24958 | 24650 | 0 | 81888 | 0.22 | 0.18 | 0.3 | 0.3 | 0 | 0.6 | 0.8894 | 0.201 | 0.8285 | 1.9452 | 72 | 37 | 30 | 67 | 17698 | 14198 | 24719 | 24436 | 0 | 81051 | 0.22 | 0.18 | 0.3 | 0.3 | 0 | 0.6 | 0.8892 | 0.2029 | 0.8271 | 1.9443 | 72 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 385 | 459 | 124 | 200 | 325 | 1390 | 233 | 322 | 281 | 340 | 202 | 800 | 112 | 663 | 248 | 709 | 131 | 544 | 754 | 161 | 508 | 361 | 1195 | 442 | 531 | 779 | 97 | 206 | 170 | 305 | 697 | 233 | 1142 | 140 | 166 | 2011 | 390 | 403 | 689 | 967 | 357 | 573 | 303 | 860 | 131 | 309 | 494 | 86 | 113 | 91 | 611 | 886 | 70 | 85 | 50 | 167 | 17 | 556 | 550 | 174 | 296 | 18 | 32 | 373 |
GCF_029338375.1 | NZ_CP119808 | NZ_CP119808.1 | Halorussus lipolyticus strain DT80 plasmid unnamed4; complete sequence. | 29736 | 28637 | 36309 | 36846 | 0 | 131528 | 0.23 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9471 | 0.0262 | 0.9742 | 1.9907 | 57 | 32 | 89 | 24916 | 20782 | 29499 | 29977 | 0 | 105174 | 0.24 | 0.2 | 0.28 | 0.28 | 0 | 0.56 | 0.9036 | 0.1991 | 0.8284 | 1.9737 | 86 | 56 | 31 | 87 | 24732 | 20638 | 29370 | 29831 | 0 | 104571 | 0.24 | 0.2 | 0.28 | 0.28 | 0 | 0.56 | 0.9035 | 0.1975 | 0.8298 | 1.9736 | 86 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 469 | 575 | 307 | 353 | 663 | 1750 | 455 | 490 | 372 | 528 | 347 | 1202 | 311 | 863 | 400 | 795 | 256 | 562 | 1022 | 276 | 605 | 534 | 1434 | 969 | 784 | 691 | 223 | 310 | 290 | 529 | 972 | 468 | 1231 | 147 | 462 | 2009 | 532 | 390 | 743 | 801 | 402 | 470 | 408 | 755 | 100 | 500 | 578 | 140 | 173 | 202 | 581 | 807 | 144 | 175 | 89 | 382 | 17 | 639 | 680 | 397 | 464 | 26 | 44 | 564 |