Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_024218795.1 | NZ_CP100400 | NZ_CP100400.1 | Halorussus sp. XZYJ18 chromosome; complete genome. | 604507 | 619323 | 1185685 | 1178948 | 0 | 3588463 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.66 | 0.9247 | 0.015 | 0.9852 | 1.9258 | 1867 | 1805 | 3672 | 564461 | 459530 | 1026138 | 1041351 | 0 | 3091480 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.66 | 0.8705 | 0.2113 | 0.8213 | 1.9046 | 2399 | 1802 | 1758 | 3560 | 553269 | 449832 | 1006470 | 1021131 | 0 | 3030702 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.66 | 0.8703 | 0.2119 | 0.8209 | 1.904 | 2179 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 1 | 1 | 2 | 134 | 87 | 230 | 267 | 0 | 718 | 0.18 | 0.12 | 0.32 | 0.37 | 0 | 0.69 | 0.8717 | 0.2695 | 0.7797 | 1.8749 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 36 | 15 | 51 | 698 | 774 | 1159 | 1270 | 0 | 3901 | 0.18 | 0.2 | 0.3 | 0.33 | 0 | 0.62 | 0.8704 | 0.1897 | 0.8354 | 1.9429 | 0 | 3 | 3 | 6 | 2277 | 1600 | 2345 | 2794 | 0 | 9016 | 0.23 | 0.17 | 0.29 | 0.31 | 0 | 0.6 | 0.9029 | 0.2695 | 0.7644 | 1.9509 | 0 | 17090 | 15715 | 3161 | 3422 | 5816 | 63451 | 4296 | 5210 | 11281 | 11578 | 1965 | 24973 | 1276 | 27008 | 5002 | 22963 | 1580 | 28618 | 32828 | 1303 | 28434 | 12007 | 49530 | 4177 | 20231 | 32430 | 1795 | 4549 | 2006 | 10732 | 24925 | 2056 | 58807 | 3480 | 2004 | 79976 | 17556 | 18539 | 25166 | 46625 | 13990 | 28185 | 4601 | 45160 | 4453 | 4610 | 19071 | 1818 | 2093 | 1103 | 24403 | 53886 | 922 | 1102 | 1641 | 1657 | 956 | 21276 | 24125 | 3585 | 4293 | 602 | 2001 | 11139 |
GCF_024218795.1 | NZ_CP100401 | NZ_CP100401.1 | Halorussus sp. XZYJ18 plasmid unnamed1; complete sequence. | 72350 | 72508 | 144742 | 144535 | 0 | 434135 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.67 | 0.9147 | 0.0018 | 0.9982 | 1.9186 | 221 | 195 | 416 | 64916 | 54439 | 123152 | 125239 | 0 | 367746 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.67 | 0.8686 | 0.2013 | 0.8289 | 1.9008 | 183 | 220 | 193 | 413 | 64613 | 54206 | 122563 | 124648 | 0 | 366030 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.67 | 0.8687 | 0.2014 | 0.8288 | 1.9009 | 179 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1811 | 1546 | 343 | 461 | 605 | 7447 | 431 | 601 | 1340 | 1516 | 238 | 2853 | 142 | 3533 | 612 | 2591 | 229 | 3569 | 4081 | 146 | 3446 | 1396 | 6113 | 385 | 2254 | 4083 | 177 | 629 | 226 | 1421 | 2515 | 187 | 7109 | 451 | 289 | 9516 | 2299 | 2180 | 3342 | 5401 | 1624 | 3393 | 443 | 5249 | 598 | 475 | 2587 | 241 | 247 | 126 | 3134 | 6853 | 103 | 138 | 262 | 150 | 89 | 2884 | 3237 | 406 | 429 | 53 | 271 | 1504 |
GCF_024218795.1 | NZ_CP100403 | NZ_CP100403.1 | Halorussus sp. XZYJ18 plasmid unnamed2; complete sequence. | 70654 | 67195 | 86770 | 87841 | 0 | 312460 | 0.23 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9487 | 0.0312 | 0.9694 | 1.9898 | 180 | 132 | 312 | 57581 | 47454 | 67942 | 69624 | 0 | 242601 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.8989 | 0.1983 | 0.8287 | 1.9706 | 375 | 176 | 125 | 301 | 55975 | 46022 | 66196 | 67832 | 0 | 236025 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.8986 | 0.2003 | 0.8271 | 1.97 | 335 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 1 | 1 | 15 | 16 | 23 | 21 | 0 | 75 | 0.2 | 0.21 | 0.31 | 0.28 | 0 | 0.59 | 0.8747 | 0.0777 | 0.9253 | 1.977 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1227 | 1201 | 588 | 815 | 1405 | 4214 | 1096 | 1062 | 733 | 993 | 813 | 3059 | 714 | 1948 | 768 | 1604 | 471 | 1329 | 2211 | 583 | 1403 | 1086 | 3314 | 2213 | 1908 | 1531 | 425 | 585 | 719 | 1221 | 2571 | 1001 | 2932 | 300 | 926 | 4196 | 1244 | 800 | 1728 | 1940 | 910 | 1219 | 925 | 1758 | 307 | 1078 | 1260 | 258 | 372 | 515 | 1188 | 2130 | 310 | 424 | 225 | 874 | 83 | 1395 | 1332 | 872 | 1014 | 87 | 131 | 1131 |
GCF_024218795.1 | NZ_CP100402 | NZ_CP100402.1 | Halorussus sp. XZYJ18 plasmid unnamed3; complete sequence. | 81443 | 82708 | 118872 | 121353 | 0 | 404376 | 0.2 | 0.2 | 0.29 | 0.3 | 0 | 0.59 | 0.9401 | 0.018 | 0.9821 | 1.9743 | 179 | 166 | 345 | 63086 | 52467 | 90271 | 90637 | 0 | 296461 | 0.22 | 0.18 | 0.3 | 0.3 | 0 | 0.6 | 0.8908 | 0.2006 | 0.8273 | 1.9484 | 239 | 167 | 157 | 324 | 60181 | 50277 | 87027 | 86948 | 0 | 284433 | 0.22 | 0.18 | 0.3 | 0.3 | 0 | 0.6 | 0.8907 | 0.1989 | 0.8289 | 1.9476 | 189 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2 | 0 | 2 | 34 | 30 | 41 | 42 | 0 | 147 | 0.23 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.8869 | 0.1486 | 0.8644 | 1.9795 | 0 | 3 | 0 | 3 | 1137 | 801 | 1171 | 1401 | 0 | 4510 | 0.23 | 0.17 | 0.29 | 0.31 | 0 | 0.6 | 0.903 | 0.2696 | 0.7641 | 1.9508 | 0 | 1600 | 1381 | 622 | 744 | 1272 | 4679 | 884 | 859 | 970 | 1210 | 593 | 3164 | 413 | 2609 | 726 | 2098 | 404 | 1925 | 2936 | 443 | 1887 | 1411 | 4600 | 1463 | 1815 | 2373 | 418 | 574 | 577 | 1339 | 2622 | 777 | 4436 | 451 | 653 | 6333 | 1629 | 1236 | 2323 | 3131 | 1184 | 1926 | 822 | 3029 | 420 | 1058 | 1634 | 216 | 364 | 352 | 1892 | 3856 | 297 | 313 | 207 | 534 | 70 | 1695 | 2207 | 657 | 940 | 105 | 149 | 1304 |