Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GCF_023238205.1 | NZ_CP096659 | NZ_CP096659.1 | Halorussus sp. XZYJT49 chromosome; complete genome. | 610673 | 609830 | 1179075 | 1180322 | 0 | 3579900 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.66 | 0.9229 | 0.0012 | 0.9988 | 1.9257 | 1828 | 1824 | 3652 | 565851 | 459264 | 1029615 | 1040766 | 0 | 3095496 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.66 | 0.8699 | 0.2122 | 0.8206 | 1.901 | 2106 | 1772 | 1783 | 3555 | 555886 | 450758 | 1013648 | 1024219 | 0 | 3044511 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.67 | 0.8696 | 0.2132 | 0.8199 | 1.9002 | 2044 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 1 | 2 | 139 | 89 | 237 | 256 | 0 | 721 | 0.19 | 0.13 | 0.33 | 0.36 | 0 | 0.68 | 0.8746 | 0.2478 | 0.7989 | 1.8866 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 27 | 24 | 51 | 690 | 774 | 1139 | 1251 | 0 | 3854 | 0.18 | 0.2 | 0.29 | 0.32 | 0 | 0.62 | 0.8734 | 0.1878 | 0.8382 | 1.9436 | 0 | 3 | 3 | 6 | 2275 | 1587 | 2359 | 2809 | 0 | 9030 | 0.23 | 0.17 | 0.29 | 0.31 | 0 | 0.6 | 0.9023 | 0.2386 | 0.7896 | 1.9526 | 0 | 17190 | 16630 | 3084 | 3347 | 5399 | 64621 | 4133 | 6005 | 10357 | 11667 | 2294 | 24930 | 1403 | 25375 | 4559 | 23076 | 1798 | 26420 | 32430 | 1733 | 27954 | 10050 | 49087 | 4710 | 20003 | 32515 | 1830 | 5155 | 2277 | 10432 | 25095 | 2808 | 59441 | 3104 | 2138 | 79236 | 17503 | 18745 | 24845 | 48027 | 14702 | 28362 | 4777 | 49170 | 4432 | 4642 | 17905 | 1537 | 2164 | 1299 | 24547 | 55248 | 1006 | 1303 | 1456 | 1793 | 998 | 22547 | 24277 | 3283 | 4842 | 629 | 1928 | 10584 |
GCF_023238205.1 | NZ_CP096660 | NZ_CP096660.1 | Halorussus sp. XZYJT49 plasmid unnamed1; complete sequence. | 71618 | 71353 | 136014 | 135618 | 0 | 414603 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.66 | 0.9267 | 0.0033 | 0.9967 | 1.9294 | 189 | 190 | 379 | 62555 | 52840 | 116110 | 118484 | 0 | 349989 | 0.18 | 0.16 | 0.33 | 0.34 | 0 | 0.67 | 0.8701 | 0.2041 | 0.8266 | 1.9017 | 181 | 189 | 189 | 378 | 62484 | 52800 | 115966 | 118373 | 0 | 349623 | 0.18 | 0.16 | 0.33 | 0.34 | 0 | 0.67 | 0.8702 | 0.2036 | 0.8271 | 1.9018 | 181 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1723 | 1572 | 400 | 412 | 606 | 7005 | 473 | 718 | 1204 | 1485 | 281 | 2730 | 214 | 3173 | 567 | 2528 | 246 | 3091 | 3815 | 280 | 3252 | 1122 | 5597 | 469 | 2141 | 3731 | 230 | 698 | 311 | 1339 | 2382 | 353 | 6614 | 451 | 291 | 8761 | 2014 | 2009 | 3072 | 5206 | 1657 | 3219 | 560 | 5440 | 559 | 574 | 2356 | 225 | 248 | 169 | 3048 | 6474 | 140 | 159 | 235 | 230 | 107 | 2954 | 3005 | 402 | 563 | 65 | 206 | 1380 |
GCF_023238205.1 | NZ_CP096661 | NZ_CP096661.1 | Halorussus sp. XZYJT49 plasmid unnamed2; complete sequence. | 56513 | 57225 | 98881 | 98753 | 0 | 311372 | 0.18 | 0.18 | 0.32 | 0.32 | 0 | 0.63 | 0.9328 | 0.0069 | 0.9931 | 1.947 | 132 | 145 | 277 | 49444 | 42189 | 84765 | 85094 | 0 | 261492 | 0.19 | 0.17 | 0.32 | 0.32 | 0 | 0.64 | 0.8819 | 0.1884 | 0.8377 | 1.9242 | 141 | 129 | 143 | 272 | 48688 | 41471 | 83447 | 83872 | 0 | 257478 | 0.19 | 0.17 | 0.32 | 0.32 | 0 | 0.64 | 0.8818 | 0.1887 | 0.8374 | 1.9238 | 140 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1471 | 1200 | 427 | 416 | 778 | 4473 | 584 | 593 | 866 | 1108 | 325 | 2327 | 201 | 2452 | 513 | 1804 | 219 | 1990 | 2646 | 236 | 2050 | 1059 | 4329 | 712 | 1582 | 2521 | 289 | 513 | 296 | 1149 | 2285 | 441 | 4797 | 342 | 336 | 6077 | 1491 | 1370 | 2084 | 3607 | 1120 | 2081 | 467 | 3501 | 387 | 651 | 1737 | 186 | 231 | 182 | 1989 | 4266 | 150 | 174 | 149 | 278 | 70 | 1846 | 2111 | 431 | 573 | 55 | 147 | 1085 |
GCF_023238205.1 | NZ_CP096662 | NZ_CP096662.1 | Halorussus sp. XZYJT49 plasmid unnamed3; complete sequence. | 36399 | 34925 | 48749 | 48523 | 0 | 168596 | 0.22 | 0.21 | 0.29 | 0.29 | 0 | 0.58 | 0.9409 | 0.023 | 0.9774 | 1.9827 | 116 | 60 | 176 | 30335 | 25329 | 39154 | 39450 | 0 | 134268 | 0.23 | 0.19 | 0.29 | 0.3 | 0 | 0.59 | 0.8941 | 0.1925 | 0.8338 | 1.9603 | 139 | 103 | 58 | 161 | 29928 | 24857 | 38522 | 38801 | 0 | 132108 | 0.23 | 0.19 | 0.29 | 0.29 | 0 | 0.58 | 0.8955 | 0.1957 | 0.8314 | 1.963 | 139 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 13 | 0 | 13 | 178 | 190 | 320 | 353 | 0 | 1041 | 0.17 | 0.18 | 0.31 | 0.34 | 0 | 0.65 | 0.8762 | 0.1515 | 0.8656 | 1.9237 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 716 | 694 | 273 | 418 | 763 | 2475 | 565 | 555 | 445 | 553 | 387 | 1498 | 337 | 1165 | 422 | 892 | 223 | 713 | 1217 | 275 | 884 | 601 | 2019 | 1172 | 1123 | 923 | 193 | 291 | 403 | 552 | 1562 | 423 | 1783 | 130 | 497 | 2432 | 705 | 513 | 958 | 1253 | 497 | 818 | 444 | 1076 | 173 | 556 | 759 | 125 | 199 | 265 | 682 | 1336 | 109 | 213 | 78 | 434 | 37 | 873 | 791 | 455 | 426 | 44 | 80 | 563 |
GCF_023238205.1 | NZ_CP096663 | NZ_CP096663.1 | Halorussus sp. XZYJT49 plasmid unnamed4; complete sequence. | 32409 | 33510 | 42285 | 42265 | 0 | 150469 | 0.22 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9438 | 0.0169 | 0.9833 | 1.9888 | 58 | 76 | 134 | 26083 | 21568 | 32112 | 32577 | 0 | 112340 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.8967 | 0.208 | 0.8215 | 1.9668 | 82 | 58 | 71 | 129 | 24761 | 20595 | 30710 | 30959 | 0 | 107025 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.8966 | 0.2087 | 0.8212 | 1.9667 | 82 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 1 | 1 | 20 | 15 | 21 | 19 | 0 | 75 | 0.27 | 0.2 | 0.28 | 0.25 | 0 | 0.53 | 0.8809 | 0.1929 | 0.8274 | 1.9889 | 0 | 0 | 3 | 3 | 1144 | 813 | 1165 | 1392 | 0 | 4514 | 0.23 | 0.17 | 0.29 | 0.31 | 0 | 0.59 | 0.9073 | 0.2327 | 0.7937 | 1.96 | 0 | 583 | 581 | 276 | 367 | 681 | 1798 | 452 | 490 | 377 | 463 | 309 | 1336 | 269 | 919 | 377 | 751 | 212 | 611 | 987 | 263 | 553 | 569 | 1607 | 791 | 795 | 725 | 180 | 262 | 273 | 518 | 1047 | 470 | 1351 | 165 | 400 | 1998 | 538 | 399 | 860 | 901 | 398 | 612 | 417 | 884 | 149 | 475 | 562 | 102 | 164 | 205 | 658 | 1051 | 122 | 168 | 89 | 330 | 34 | 609 | 704 | 380 | 461 | 40 | 55 | 502 |