Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_024138125.1 | NZ_CP099993 | NZ_CP099993.1 | Halorussus sp. YCN54 chromosome; complete genome. | 501682 | 495830 | 1019686 | 1019954 | 0 | 3037152 | 0.17 | 0.16 | 0.34 | 0.34 | 0 | 0.67 | 0.9202 | 0.006 | 0.994 | 1.9133 | 1564 | 1547 | 3111 | 455683 | 376281 | 877918 | 886140 | 0 | 2596022 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.67 | 0.8665 | 0.2084 | 0.8238 | 1.8904 | 1691 | 1526 | 1493 | 3019 | 448241 | 369830 | 864456 | 872018 | 0 | 2554545 | 0.18 | 0.15 | 0.33 | 0.34 | 0 | 0.68 | 0.8663 | 0.2093 | 0.8231 | 1.8895 | 1642 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 1 | 2 | 133 | 83 | 250 | 273 | 0 | 739 | 0.18 | 0.11 | 0.34 | 0.37 | 0 | 0.71 | 0.8613 | 0.2536 | 0.7914 | 1.8558 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 20 | 28 | 48 | 654 | 731 | 1070 | 1179 | 0 | 3634 | 0.18 | 0.2 | 0.29 | 0.32 | 0 | 0.62 | 0.8688 | 0.1799 | 0.8426 | 1.946 | 0 | 0 | 3 | 3 | 1100 | 771 | 1197 | 1443 | 0 | 4511 | 0.22 | 0.17 | 0.29 | 0.32 | 0 | 0.61 | 0.9063 | 0.2122 | 0.8125 | 1.9541 | 0 | 14518 | 13551 | 1951 | 1762 | 4051 | 61054 | 3266 | 3331 | 8010 | 9584 | 1907 | 17694 | 957 | 17178 | 2230 | 16977 | 1173 | 22511 | 27342 | 1306 | 23096 | 6710 | 44809 | 4076 | 16094 | 30531 | 1348 | 2770 | 1774 | 7961 | 22191 | 2082 | 52546 | 3033 | 1518 | 68417 | 14849 | 19112 | 21097 | 40566 | 12815 | 24543 | 2586 | 41264 | 3754 | 3308 | 17987 | 1249 | 1952 | 1043 | 20849 | 46791 | 620 | 763 | 1739 | 1420 | 895 | 21123 | 17647 | 2178 | 2278 | 389 | 1735 | 7654 |
GCF_024138125.1 | NZ_CP099994 | NZ_CP099994.1 | Halorussus sp. YCN54 plasmid unnamed1; complete sequence. | 56372 | 54774 | 115081 | 115872 | 0 | 342099 | 0.16 | 0.16 | 0.34 | 0.34 | 0 | 0.68 | 0.9151 | 0.0178 | 0.9824 | 1.9096 | 147 | 165 | 312 | 49641 | 42372 | 98463 | 100082 | 0 | 290558 | 0.17 | 0.15 | 0.34 | 0.35 | 0 | 0.68 | 0.8645 | 0.1985 | 0.8317 | 1.883 | 150 | 141 | 164 | 305 | 47128 | 40623 | 95223 | 96446 | 0 | 279420 | 0.17 | 0.15 | 0.34 | 0.35 | 0 | 0.69 | 0.8639 | 0.1978 | 0.8324 | 1.8818 | 140 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 3 | 0 | 3 | 1107 | 780 | 1195 | 1429 | 0 | 4511 | 0.23 | 0.17 | 0.29 | 0.32 | 0 | 0.6 | 0.9078 | 0.2065 | 0.817 | 1.9564 | 0 | 1555 | 1183 | 194 | 166 | 352 | 6549 | 298 | 332 | 844 | 1216 | 187 | 1824 | 83 | 1910 | 212 | 1809 | 136 | 2467 | 3232 | 126 | 2596 | 714 | 4967 | 409 | 1660 | 3275 | 141 | 286 | 190 | 936 | 2063 | 183 | 5762 | 335 | 150 | 7405 | 1705 | 2136 | 2589 | 4319 | 1316 | 2753 | 225 | 4341 | 440 | 318 | 2252 | 145 | 237 | 108 | 2400 | 5262 | 47 | 66 | 245 | 124 | 106 | 2523 | 2247 | 207 | 211 | 21 | 177 | 872 |
GCF_024138125.1 | NZ_CP099995 | NZ_CP099995.1 | Halorussus sp. YCN54 plasmid unnamed2; complete sequence. | 34086 | 35186 | 44408 | 44835 | 0 | 158515 | 0.22 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9406 | 0.0207 | 0.9796 | 1.9884 | 65 | 64 | 129 | 30987 | 25113 | 36525 | 38190 | 0 | 130815 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.9001 | 0.1797 | 0.8428 | 1.9713 | 190 | 65 | 63 | 128 | 30813 | 24970 | 36291 | 37976 | 0 | 130050 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.9001 | 0.18 | 0.8426 | 1.9713 | 142 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 762 | 775 | 312 | 401 | 826 | 2364 | 619 | 514 | 414 | 566 | 459 | 1686 | 349 | 992 | 397 | 931 | 271 | 691 | 1215 | 284 | 857 | 661 | 1763 | 1289 | 1036 | 781 | 280 | 304 | 365 | 688 | 1369 | 467 | 1699 | 184 | 412 | 2388 | 721 | 513 | 983 | 1036 | 549 | 635 | 476 | 922 | 194 | 559 | 750 | 188 | 212 | 242 | 723 | 1090 | 134 | 236 | 139 | 469 | 32 | 745 | 746 | 459 | 469 | 37 | 58 | 661 |
GCF_024138125.1 | NZ_CP099996 | NZ_CP099996.1 | Halorussus sp. YCN54 plasmid unnamed3; complete sequence. | 11180 | 11172 | 18201 | 18201 | 0 | 58754 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.62 | 0.9277 | 0.0004 | 0.9996 | 1.9583 | 31 | 22 | 53 | 9657 | 8165 | 15263 | 15485 | 0 | 48570 | 0.21 | 0.17 | 0.31 | 0.31 | 0 | 0.62 | 0.8894 | 0.1747 | 0.8473 | 1.9446 | 20 | 31 | 21 | 52 | 9555 | 8049 | 15135 | 15354 | 0 | 48093 | 0.21 | 0.17 | 0.31 | 0.32 | 0 | 0.62 | 0.889 | 0.1766 | 0.8458 | 1.9436 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 340 | 217 | 73 | 81 | 158 | 919 | 130 | 99 | 161 | 244 | 62 | 481 | 49 | 415 | 82 | 324 | 39 | 299 | 512 | 35 | 332 | 260 | 814 | 198 | 322 | 406 | 62 | 69 | 79 | 234 | 526 | 91 | 868 | 61 | 58 | 1142 | 302 | 240 | 414 | 540 | 243 | 360 | 96 | 549 | 69 | 133 | 306 | 33 | 60 | 49 | 357 | 690 | 22 | 44 | 32 | 80 | 7 | 312 | 403 | 109 | 107 | 15 | 30 | 187 |