Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_023028105.1 | NZ_CP095491 | NZ_CP095491.1 | Halosolutus gelatinilyticus strain SQT-29-1 chromosome; complete genome. | 673200 | 677238 | 1278099 | 1278281 | 0 | 3906818 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.65 | 0.9245 | 0.0031 | 0.9969 | 1.9301 | 1919 | 1903 | 3822 | 592624 | 505465 | 1079235 | 1088876 | 0 | 3266200 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8706 | 0.1867 | 0.8398 | 1.9117 | 1687 | 1860 | 1852 | 3712 | 582311 | 496238 | 1062483 | 1071263 | 0 | 3212295 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8705 | 0.1868 | 0.8397 | 1.9112 | 1578 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 1 | 2 | 156 | 95 | 279 | 296 | 0 | 826 | 0.18 | 0.12 | 0.34 | 0.36 | 0 | 0.7 | 0.8741 | 0.2562 | 0.7884 | 1.8689 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 26 | 24 | 50 | 672 | 751 | 1118 | 1226 | 0 | 3767 | 0.18 | 0.2 | 0.3 | 0.33 | 0 | 0.62 | 0.8759 | 0.1787 | 0.8443 | 1.9403 | 0 | 7 | 3 | 10 | 3358 | 2421 | 3549 | 4336 | 0 | 13664 | 0.23 | 0.16 | 0.3 | 0.31 | 0 | 0.61 | 0.8917 | 0.2652 | 0.7697 | 1.9468 | 0 | 17414 | 12627 | 2922 | 2403 | 5676 | 65098 | 4717 | 3673 | 11646 | 12485 | 2632 | 27989 | 1538 | 34175 | 3137 | 21584 | 1400 | 18745 | 31440 | 3620 | 29155 | 8344 | 53157 | 20342 | 20114 | 27399 | 1690 | 4720 | 2695 | 11428 | 43256 | 3985 | 64679 | 1267 | 1985 | 72365 | 19464 | 16979 | 26596 | 48136 | 14278 | 28374 | 5445 | 50513 | 4900 | 7290 | 20182 | 1425 | 3097 | 1276 | 25428 | 59357 | 1272 | 1264 | 1933 | 1912 | 769 | 26156 | 29902 | 3529 | 3581 | 766 | 2177 | 13262 |
GCF_023028105.1 | NZ_CP095492 | NZ_CP095492.1 | Halosolutus gelatinilyticus strain SQT-29-1 plasmid unnamed1; complete sequence. | 104200 | 104390 | 177212 | 176410 | 0 | 562212 | 0.19 | 0.19 | 0.32 | 0.31 | 0 | 0.63 | 0.9307 | 0.0032 | 0.9968 | 1.9514 | 225 | 198 | 423 | 87958 | 73863 | 143659 | 146575 | 0 | 452055 | 0.2 | 0.17 | 0.31 | 0.32 | 0 | 0.63 | 0.8846 | 0.1654 | 0.8548 | 1.9345 | 339 | 221 | 195 | 416 | 87225 | 73161 | 142542 | 145353 | 0 | 448281 | 0.2 | 0.17 | 0.31 | 0.32 | 0 | 0.63 | 0.885 | 0.1657 | 0.8547 | 1.9345 | 274 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2686 | 1734 | 651 | 486 | 1068 | 8804 | 794 | 784 | 1605 | 2273 | 635 | 4026 | 303 | 5021 | 598 | 3569 | 283 | 2658 | 4586 | 608 | 3652 | 1470 | 6841 | 2874 | 2954 | 3511 | 376 | 744 | 586 | 2044 | 6263 | 724 | 7888 | 342 | 408 | 9422 | 2927 | 2311 | 4032 | 5470 | 2112 | 3190 | 879 | 6282 | 667 | 1169 | 2934 | 273 | 457 | 342 | 3488 | 7218 | 246 | 260 | 352 | 414 | 90 | 3084 | 4518 | 579 | 715 | 91 | 235 | 1821 |
GCF_023028105.1 | NZ_CP095493 | NZ_CP095493.1 | Halosolutus gelatinilyticus strain SQT-29-1 plasmid unnamed2; complete sequence. | 35482 | 33971 | 65245 | 65844 | 0 | 200542 | 0.18 | 0.17 | 0.33 | 0.33 | 0 | 0.65 | 0.9159 | 0.0263 | 0.9742 | 1.9306 | 96 | 78 | 174 | 28005 | 24509 | 52723 | 53490 | 0 | 158727 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8714 | 0.1732 | 0.8506 | 1.9122 | 119 | 95 | 77 | 172 | 27747 | 24151 | 52197 | 52943 | 0 | 157038 | 0.18 | 0.16 | 0.33 | 0.33 | 0 | 0.66 | 0.8713 | 0.1724 | 0.8512 | 1.9122 | 94 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 729 | 516 | 164 | 102 | 281 | 2872 | 227 | 158 | 564 | 515 | 111 | 1427 | 71 | 1806 | 179 | 1037 | 69 | 1016 | 1448 | 185 | 1337 | 461 | 2577 | 1011 | 910 | 1356 | 86 | 255 | 111 | 661 | 2027 | 230 | 3222 | 51 | 75 | 3359 | 949 | 780 | 1308 | 2403 | 739 | 1307 | 228 | 2360 | 233 | 430 | 1088 | 91 | 133 | 67 | 1366 | 3014 | 48 | 63 | 83 | 90 | 33 | 1440 | 1677 | 173 | 175 | 35 | 104 | 723 |
GCF_023028105.1 | NZ_CP095494 | NZ_CP095494.1 | Halosolutus gelatinilyticus strain SQT-29-1 plasmid unnamed3; complete sequence. | 20032 | 18905 | 24533 | 24838 | 0 | 88308 | 0.23 | 0.21 | 0.28 | 0.28 | 0 | 0.56 | 0.9393 | 0.0351 | 0.9657 | 1.9896 | 53 | 37 | 90 | 16062 | 12800 | 18619 | 19791 | 0 | 67272 | 0.24 | 0.2 | 0.27 | 0.29 | 0 | 0.56 | 0.8946 | 0.2045 | 0.822 | 1.9661 | 81 | 52 | 34 | 86 | 15821 | 12576 | 18390 | 19504 | 0 | 66291 | 0.24 | 0.19 | 0.27 | 0.29 | 0 | 0.56 | 0.8947 | 0.2014 | 0.8245 | 1.9674 | 81 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 346 | 353 | 154 | 196 | 359 | 1113 | 246 | 249 | 211 | 315 | 232 | 873 | 160 | 641 | 159 | 476 | 128 | 346 | 485 | 141 | 376 | 325 | 827 | 770 | 407 | 393 | 108 | 158 | 217 | 327 | 781 | 273 | 827 | 116 | 210 | 1231 | 352 | 207 | 491 | 484 | 242 | 409 | 311 | 567 | 105 | 316 | 333 | 97 | 92 | 145 | 519 | 655 | 89 | 100 | 63 | 199 | 21 | 402 | 485 | 198 | 256 | 19 | 46 | 365 |