GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_031454185.1	NZ_JAVDQI010000001	NZ_JAVDQI010000001.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_01; whole genome shotgun sequence.	193282	181807	134668	124991	634748	0.3	0.29	0.21	0.2	0.41	0.9444	0.0679	0.9344	1.9752	263	373	636	168050	144945	102133	127169	542297	0.31	0.27	0.19	0.24	0	0.42	0.9005	0.2377	0.7956	1.9596	424	242	331	573	154366	132651	93573	116612	497202	0.31	0.27	0.18	0.23	0	0.42	0.9009	0.2389	0.7945	1.9595	364	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	73	73	69	100	315	0.23	0.23	0.22	0.32	0	0.54	0.9152	0.1834	0.845	1.9831	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	7	12	167	205	261	303	936	0.18	0.22	0.28	0.33	0	0.61	0.8908	0.191	0.8316	1.9532	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4871	5086	2870	2221	4921	4736	3236	4355	1966	1373	4801	8244	2712	1022	1974	2803	2166	2561	3425	3033	2659	4235	2016	7570	2794	2196	930	2039	3561	3426	4776	5552	2446	4353	3094	3148	1126	828	1806	1594	1376	686	6307	1978	799	3759	1539	1932	1449	2129	806	995	1835	2261	2081	1836	12	365	1065	1326	1597	265	296	515
GCF_031454185.1	NZ_JAVDQI010000002	NZ_JAVDQI010000002.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_02; whole genome shotgun sequence.	96106	111303	78951	82830	369190	0.26	0.3	0.21	0.22	0.44	0.948	0.0972	0.9083	1.9866	191	182	373	95071	83286	66038	80691	325086	0.3	0.26	0.2	0.25	0	0.45	0.9055	0.2286	0.8026	1.9743	362	174	166	340	87654	76827	60784	74417	299682	0.3	0.26	0.2	0.25	0	0.45	0.9054	0.2296	0.8016	1.9743	241	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	0	4	50	67	80	98	295	0.17	0.23	0.27	0.33	0	0.6	0.8925	0.2517	0.7899	1.9497	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3128	3015	1748	1251	3416	3144	1791	2122	1463	754	2164	4374	1497	652	1008	1806	1098	1965	2210	1530	1864	2600	1342	4375	1707	1593	514	1065	1942	2210	3268	3417	1888	2897	1782	2184	739	623	1135	1223	975	527	2924	1543	464	2159	1076	1089	732	1237	541	749	637	1355	1304	910	7	282	794	884	592	132	201	276
GCF_031454185.1	NZ_JAVDQI010000003	NZ_JAVDQI010000003.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_03; whole genome shotgun sequence.	62362	54913	46091	42604	205970	0.3	0.27	0.22	0.21	0.43	0.9442	0.1028	0.9024	1.9839	94	146	240	54280	46737	36353	44500	181870	0.3	0.25	0.2	0.25	0	0.45	0.9015	0.2382	0.7956	1.9694	234	82	123	205	48086	41391	32148	39313	160938	0.3	0.26	0.19	0.24	0	0.44	0.9018	0.2455	0.7899	1.9702	169	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	97	74	84	97	352	0.28	0.21	0.24	0.28	0	0.51	0.913	0.2063	0.8144	1.9911	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	11	11	159	173	246	278	856	0.19	0.2	0.29	0.32	0	0.61	0.8856	0.1479	0.867	1.9557	0	1	1	28	28	34	31	121	0.23	0.23	0.28	0.26	0	0.54	0.887	0.0462	0.9559	1.9952	1596	1760	1076	699	2106	1476	1064	1215	707	375	1186	2394	814	337	576	904	577	930	1180	794	901	1528	710	2151	935	762	264	533	1056	1194	1724	1881	982	1539	1030	1010	411	270	612	565	415	269	1725	811	241	1205	512	653	445	623	248	358	371	758	751	649	0	123	377	574	352	90	115	157
GCF_031454185.1	NZ_JAVDQI010000004	NZ_JAVDQI010000004.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_04; whole genome shotgun sequence.	57362	59119	37931	41904	196316	0.29	0.3	0.19	0.21	0.41	0.942	0.0648	0.9377	1.9739	103	62	165	50366	44633	31271	38335	164605	0.31	0.27	0.19	0.24	0	0.43	0.9016	0.2207	0.8089	1.9637	39	92	56	148	45691	40154	28298	34573	148716	0.31	0.27	0.19	0.24	0	0.42	0.9016	0.2247	0.8056	1.9638	39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	28	28	51	53	160	0.16	0.16	0.33	0.34	0	0.67	0.8277	0.1781	0.8416	1.8934	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1395	1473	855	678	1504	1337	973	1273	614	452	1476	2391	797	290	603	862	650	743	1143	962	845	1318	641	2308	764	678	276	568	1141	1015	1525	1637	756	1435	983	953	329	234	589	535	433	183	1802	646	225	1097	477	496	389	567	255	279	486	676	602	512	4	94	332	350	408	65	79	114
GCF_031454185.1	NZ_JAVDQI010000005	NZ_JAVDQI010000005.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_05; whole genome shotgun sequence.	53828	52470	39744	37565	183607	0.29	0.29	0.22	0.2	0.42	0.9434	0.041	0.96	1.9816	77	104	181	48204	42002	31496	38330	160032	0.3	0.27	0.19	0.24	0	0.43	0.9043	0.2228	0.8075	1.9669	121	70	95	165	43875	38081	28630	34761	145347	0.31	0.27	0.19	0.24	0	0.43	0.9038	0.2256	0.8054	1.9665	105	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	2	2	23	32	41	53	149	0.15	0.22	0.27	0.36	0	0.63	0.8493	0.3067	0.736	1.9319	1	0	1	54	59	47	56	216	0.25	0.27	0.22	0.26	0	0.48	0.9099	0.1316	0.8773	1.9951	1398	1427	900	609	1552	1409	889	1208	628	341	1162	2240	772	289	566	871	567	862	1113	916	837	1129	631	2007	797	738	258	604	1009	1055	1394	1623	829	1418	1022	1023	295	279	575	544	457	237	1633	724	183	1092	527	567	348	584	225	333	376	693	620	482	5	118	354	398	398	79	81	149
GCF_031454185.1	NZ_JAVDQI010000006	NZ_JAVDQI010000006.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_06; whole genome shotgun sequence.	47531	50406	33364	34856	166157	0.29	0.3	0.2	0.21	0.41	0.9422	0.0512	0.9501	1.9763	76	62	138	42304	37390	27351	32275	139320	0.31	0.27	0.19	0.23	0	0.42	0.9031	0.211	0.817	1.9633	91	66	50	116	37351	33144	24149	28440	123084	0.31	0.27	0.19	0.23	0	0.42	0.9027	0.213	0.8158	1.962	59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	2	3	43	53	67	73	236	0.18	0.23	0.28	0.31	0	0.59	0.9043	0.1973	0.8317	1.9621	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1092	1108	763	605	1349	1046	774	1030	564	378	1252	1679	753	286	574	762	496	612	946	801	702	1116	531	1806	670	624	249	463	931	985	1217	1308	661	1243	928	772	271	231	512	417	408	145	1280	537	173	913	371	447	274	455	207	250	424	535	449	463	2	85	262	281	329	48	66	117
GCF_031454185.1	NZ_JAVDQI010000007	NZ_JAVDQI010000007.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_07; whole genome shotgun sequence.	26485	31907	21452	21975	101819	0.26	0.31	0.21	0.22	0.43	0.9435	0.1049	0.9031	1.9807	40	55	95	25744	22259	17262	21316	86581	0.3	0.26	0.2	0.24	0	0.44	0.9043	0.2334	0.7991	1.9721	33	37	46	83	24146	20943	16159	20001	81249	0.3	0.26	0.2	0.24	0	0.44	0.9052	0.2328	0.7991	1.9726	33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	29	35	46	50	160	0.18	0.22	0.29	0.31	0	0.6	0.8869	0.1681	0.8512	1.9636	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	845	826	479	318	960	811	560	571	351	222	602	1232	406	156	278	493	315	498	649	421	495	672	384	1133	399	423	135	298	553	676	851	995	450	783	530	634	184	136	302	323	299	111	829	417	101	605	282	327	187	304	133	173	189	363	373	250	2	61	190	208	177	35	46	72
GCF_031454185.1	NZ_JAVDQI010000008	NZ_JAVDQI010000008.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_08; whole genome shotgun sequence.	29800	28931	19881	20279	98891	0.3	0.29	0.2	0.21	0.41	0.9449	0.0247	0.9756	1.9743	54	38	92	24414	21866	15794	18701	80775	0.31	0.27	0.19	0.23	0	0.42	0.9004	0.23	0.8015	1.9593	32	48	35	83	22246	19846	14383	17016	73491	0.31	0.27	0.19	0.23	0	0.42	0.9001	0.2251	0.8048	1.9604	24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	713	666	482	341	743	604	540	681	283	276	677	1120	407	150	276	441	312	343	563	541	456	556	299	1066	405	335	171	343	499	551	759	755	387	622	543	479	157	138	308	304	240	105	820	335	93	535	202	276	140	264	134	145	276	278	253	285	3	70	164	202	231	32	47	75
GCF_031454185.1	NZ_JAVDQI010000009	NZ_JAVDQI010000009.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_09; whole genome shotgun sequence.	29526	26088	20468	18473	94555	0.31	0.28	0.22	0.2	0.41	0.9419	0.1131	0.893	1.9751	42	59	101	24962	21881	15316	19275	81434	0.3	0.27	0.19	0.24	0	0.43	0.9023	0.2218	0.8079	1.9661	54	32	51	83	20138	17830	12791	16087	66846	0.3	0.27	0.19	0.24	0	0.43	0.9031	0.2212	0.8085	1.9679	34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	1	3	48	47	72	71	238	0.19	0.19	0.31	0.3	0	0.61	0.8155	0.2313	0.8086	1.93	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	666	671	384	340	655	698	429	562	248	250	590	1071	374	135	231	345	268	346	501	432	358	593	251	1082	389	312	120	260	464	459	696	736	369	571	404	460	175	126	247	226	188	99	752	290	107	507	190	232	184	264	110	149	162	315	281	227	3	59	125	222	181	37	43	61
GCF_031454185.1	NZ_JAVDQI010000010	NZ_JAVDQI010000010.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_10; whole genome shotgun sequence.	28620	24022	19190	18299	90131	0.32	0.27	0.21	0.2	0.42	0.9431	0.1111	0.8965	1.9761	41	48	89	23280	20001	14866	17970	76117	0.31	0.27	0.19	0.24	0	0.43	0.8977	0.2579	0.7821	1.9571	180	35	36	71	19228	16162	12082	14526	61998	0.31	0.27	0.18	0.24	0	0.42	0.8961	0.2732	0.7708	1.9542	135	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	3	4	63	66	97	90	316	0.2	0.21	0.31	0.29	0	0.59	0.8942	0.1327	0.8789	1.9674	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	608	589	389	275	600	580	381	515	252	244	624	969	308	99	240	365	234	301	479	379	339	510	236	908	368	282	131	242	437	435	532	644	320	540	472	456	145	112	229	229	174	128	784	277	103	442	172	227	136	258	114	145	198	273	199	251	0	65	135	185	250	35	36	81
GCF_031454185.1	NZ_JAVDQI010000011	NZ_JAVDQI010000011.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_11; whole genome shotgun sequence.	27397	25625	17573	16510	87105	0.31	0.29	0.2	0.19	0.39	0.9408	0.0646	0.9374	1.9649	31	52	83	20499	17975	12184	15054	65712	0.31	0.27	0.18	0.23	0	0.41	0.9	0.2302	0.8016	1.9595	37	28	48	76	19391	17035	11471	14164	62061	0.32	0.27	0.18	0.23	0	0.41	0.9003	0.2278	0.8033	1.9595	22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	15	16	23	22	76	0.2	0.21	0.3	0.29	0	0.59	0.887	0.0545	0.947	1.9749	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	645	577	339	312	544	538	426	599	213	218	644	1038	358	130	263	344	275	309	440	451	365	507	260	891	319	248	159	260	478	495	547	621	258	635	424	355	127	114	226	193	178	65	737	221	111	479	200	264	164	288	108	84	234	294	198	259	4	46	136	130	206	46	26	64
GCF_031454185.1	NZ_JAVDQI010000012	NZ_JAVDQI010000012.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_12; whole genome shotgun sequence.	13085	12061	8705	8126	41977	0.31	0.29	0.21	0.19	0.4	0.9368	0.0751	0.9276	1.9704	17	23	40	10419	9099	6175	7716	33409	0.31	0.27	0.18	0.24	0	0.42	0.8975	0.2574	0.7834	1.9527	23	11	20	31	7882	7200	4770	6026	25878	0.31	0.28	0.18	0.24	0	0.41	0.899	0.2517	0.7877	1.9526	23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	16	16	25	21	78	0.21	0.21	0.32	0.27	0	0.59	0.8809	0.087	0.92	1.9734	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	214	257	152	133	243	197	188	226	104	59	288	411	136	53	108	157	115	159	215	229	152	222	81	357	149	115	59	119	192	184	260	261	143	241	130	127	42	53	86	97	83	24	323	92	38	210	105	111	56	89	51	57	110	108	108	76	1	31	60	46	74	16	14	29
GCF_031454185.1	NZ_JAVDQI010000013	NZ_JAVDQI010000013.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_13; whole genome shotgun sequence.	11893	11102	8653	8293	39941	0.3	0.28	0.22	0.21	0.42	0.937	0.0556	0.9459	1.9828	15	22	37	9651	8771	6622	7773	32817	0.3	0.26	0.2	0.24	0	0.44	0.9051	0.2027	0.8237	1.9682	4	14	17	31	8312	7368	5566	6687	27933	0.3	0.27	0.19	0.24	0	0.43	0.9043	0.2191	0.8105	1.9683	4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	30	28	41	50	149	0.2	0.19	0.28	0.34	0	0.61	0.9041	0.1335	0.8767	1.9596	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	313	230	154	126	274	260	180	203	119	79	245	371	153	73	118	183	121	161	205	139	168	236	115	387	168	140	55	126	215	240	285	293	143	280	179	174	73	60	133	90	82	39	283	120	43	220	101	100	63	109	55	72	85	142	119	108	0	25	68	59	79	10	21	41
GCF_031454185.1	NZ_JAVDQI010000014	NZ_JAVDQI010000014.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_14; whole genome shotgun sequence.	10420	9716	7529	7220	34885	0.3	0.28	0.22	0.21	0.42	0.9369	0.0559	0.9457	1.9821	15	15	30	8912	7685	5844	6898	29339	0.31	0.26	0.19	0.24	0	0.43	0.9023	0.2149	0.8133	1.9706	4	13	15	28	8483	7344	5550	6577	27954	0.31	0.26	0.19	0.24	0	0.43	0.9033	0.2166	0.8119	1.97	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	308	270	169	128	357	272	187	195	108	95	247	467	176	48	89	191	101	117	203	133	139	259	138	455	152	138	49	89	217	191	298	369	182	220	214	187	62	33	138	68	86	32	262	127	30	203	68	100	79	93	32	47	66	141	113	121	0	14	70	75	54	17	11	18
GCF_031454185.1	NZ_JAVDQI010000015	NZ_JAVDQI010000015.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_15; whole genome shotgun sequence.	9460	9928	7582	6312	33282	0.28	0.3	0.23	0.19	0.42	0.9361	0.1155	0.8927	1.9775	9	22	31	8219	7278	5282	6857	27636	0.31	0.26	0.18	0.24	0	0.42	0.902	0.2382	0.7934	1.9623	8	9	21	30	8009	7058	5187	6731	26985	0.31	0.26	0.19	0.24	0	0.43	0.9019	0.2407	0.7913	1.9638	8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	255	308	159	110	278	291	230	217	98	67	211	426	148	56	88	153	85	154	196	157	138	255	108	415	178	131	50	99	212	223	283	275	142	201	158	141	49	39	84	120	110	36	285	139	67	210	72	106	94	106	33	67	84	145	111	79	0	17	78	66	54	14	16	18
GCF_031454185.1	NZ_JAVDQI010000016	NZ_JAVDQI010000016.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_16; whole genome shotgun sequence.	8133	9310	6347	6202	29992	0.27	0.31	0.21	0.21	0.42	0.9383	0.079	0.9254	1.9788	16	15	31	7718	6339	5026	5967	25050	0.31	0.26	0.19	0.24	0	0.43	0.9002	0.2496	0.7865	1.9667	0	14	14	28	6996	5623	4530	5333	22482	0.32	0.25	0.19	0.24	0	0.43	0.8997	0.2498	0.7865	1.9658	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	236	233	138	87	306	233	149	152	102	60	179	397	145	29	67	124	80	85	178	110	126	179	111	293	144	102	43	66	129	176	209	280	139	234	137	162	62	43	81	81	59	47	291	123	43	146	58	83	52	81	28	42	64	100	94	93	1	15	35	56	53	14	13	16
GCF_031454185.1	NZ_JAVDQI010000017	NZ_JAVDQI010000017.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_17; whole genome shotgun sequence.	5487	5660	3866	3530	18543	0.3	0.31	0.21	0.19	0.4	0.9349	0.0609	0.9413	1.9696	6	13	19	4396	3980	2700	3393	14469	0.31	0.28	0.18	0.23	0	0.41	0.8925	0.2198	0.8104	1.9595	0	4	13	17	3754	3225	2179	2833	11991	0.32	0.27	0.18	0.23	0	0.41	0.8894	0.2309	0.8014	1.9568	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	127	112	95	65	148	98	75	97	33	40	125	205	73	20	45	84	43	64	86	85	61	102	37	173	64	53	24	33	96	97	93	117	69	106	98	92	14	13	38	25	36	7	127	46	30	102	44	43	42	32	16	20	55	67	35	60	1	4	25	21	30	7	9	13
GCF_031454185.1	NZ_JAVDQI010000018	NZ_JAVDQI010000018.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_18; whole genome shotgun sequence.	4958	5038	3536	3048	16580	0.3	0.3	0.21	0.18	0.4	0.9364	0.0821	0.9231	1.9676	4	13	17	4031	3477	2391	3046	12945	0.32	0.27	0.17	0.24	0	0.41	0.8994	0.2445	0.7941	1.9542	8	4	12	16	3962	3414	2354	3002	12732	0.32	0.27	0.17	0.24	0	0.41	0.901	0.2515	0.7889	1.9541	4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	133	158	66	67	127	111	87	111	40	34	113	199	77	18	50	88	62	49	78	82	55	131	49	218	83	50	35	58	87	73	109	130	64	101	78	77	29	16	34	43	37	10	168	55	17	115	32	44	45	59	15	28	38	61	55	51	0	11	32	40	34	6	10	11
GCF_031454185.1	NZ_JAVDQI010000019	NZ_JAVDQI010000019.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_19; whole genome shotgun sequence.	1196	1227	891	765	4079	0.29	0.3	0.22	0.19	0.41	0.9152	0.0889	0.9167	1.9726	0	2	2	603	532	389	460	1984	0.31	0.27	0.19	0.23	0	0.42	0.912	0.1431	0.8667	1.977	0	0	1	1	229	198	133	151	711	0.32	0.28	0.19	0.21	0	0.4	0.9083	0.136	0.8727	1.9672	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	4	7	5	8	6	7	8	3	0	6	15	20	1	9	2	4	3	3	5	1	3	1	10	3	3	0	4	3	9	4	5	3	5	14	2	0	1	1	3	2	1	6	2	0	8	3	0	0	0	0	1	9	4	1	4	0	0	2	0	0	1	0	0
GCF_031454185.1	NZ_JAVDQI010000020	NZ_JAVDQI010000020.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_20; whole genome shotgun sequence.	722	862	901	681	3166	0.23	0.27	0.28	0.22	0.5	0.9333	0.2274	0.7967	1.9902	0	2	2	824	685	657	881	3047	0.26	0.24	0.24	0.26	0	0.5	0.9183	0.1663	0.8504	1.9931	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	2	2	824	685	657	881	3047	0.26	0.24	0.24	0.26	0	0.5	0.9183	0.1663	0.8504	1.9931	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_031454185.1	NZ_JAVDQI010000021	NZ_JAVDQI010000021.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_21; whole genome shotgun sequence.	894	626	367	468	2355	0.38	0.27	0.16	0.2	0.35	0.9061	0.2973	0.7422	1.9198	2	0	2	691	468	274	313	1746	0.4	0.27	0.16	0.18	0	0.34	0.8846	0.2528	0.7834	1.9006	23	1	0	1	381	259	150	185	975	0.39	0.27	0.15	0.19	0	0.34	0.8886	0.2951	0.7453	1.9082	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	7	5	4	13	2	6	15	2	6	17	12	5	1	7	9	5	1	4	7	2	5	0	11	2	3	4	6	6	15	3	7	3	6	10	6	2	0	3	3	1	0	26	0	1	7	1	10	3	8	0	2	10	3	1	7	0	0	0	1	7	1	0	3
GCF_031454185.1	NZ_JAVDQI010000022	NZ_JAVDQI010000022.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_22; whole genome shotgun sequence.	279	334	431	320	1364	0.2	0.24	0.32	0.23	0.55	0.9236	0.2375	0.7889	1.9813	0	1	1	329	278	319	429	1355	0.24	0.21	0.24	0.32	0	0.55	0.9264	0.2311	0.7943	1.9812	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	329	278	319	429	1355	0.24	0.21	0.24	0.32	0	0.55	0.9264	0.2311	0.7943	1.9812	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_031454185.1	NZ_JAVDQI010000023	NZ_JAVDQI010000023.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_23; whole genome shotgun sequence.	455	359	207	208	1229	0.37	0.29	0.17	0.17	0.34	0.9103	0.1203	0.8921	1.9159	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_031454185.1	NZ_JAVDQI010000024	NZ_JAVDQI010000024.1	Methanococcoides alaskense strain DSM 17273 Ga0451171_24; whole genome shotgun sequence.	302	273	223	229	1027	0.29	0.27	0.22	0.22	0.44	0.9101	0.0637	0.9389	1.9885	1	0	1	302	273	223	229	1027	0.29	0.27	0.22	0.22	0	0.44	0.9101	0.0637	0.9389	1.9885	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0