Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_000025625.1 | NC_013922 | NC_013922.1 | Natrialba magadii ATCC 43099; complete sequence. | 723894 | 723542 | 1152604 | 1151818 | 0 | 3751858 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.61 | 0.9421 | 0.0006 | 0.9994 | 1.962 | 1755 | 1789 | 3544 | 641617 | 529445 | 985376 | 976430 | 0 | 3132868 | 0.21 | 0.17 | 0.31 | 0.31 | 0 | 0.62 | 0.8848 | 0.2033 | 0.8259 | 1.941 | 1739 | 1714 | 1748 | 3462 | 634159 | 523218 | 975237 | 965708 | 0 | 3098322 | 0.21 | 0.17 | 0.31 | 0.31 | 0 | 0.62 | 0.8848 | 0.2038 | 0.8256 | 1.9409 | 1725 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 2 | 0 | 2 | 161 | 120 | 296 | 317 | 0 | 894 | 0.18 | 0.13 | 0.33 | 0.36 | 0 | 0.69 | 0.8819 | 0.175 | 0.8436 | 1.889 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 22 | 26 | 48 | 657 | 722 | 1073 | 1178 | 0 | 3630 | 0.18 | 0.2 | 0.29 | 0.33 | 0 | 0.62 | 0.8683 | 0.1868 | 0.8393 | 1.9416 | 0 | 3 | 3 | 6 | 2235 | 1656 | 2290 | 2845 | 0 | 9026 | 0.23 | 0.18 | 0.27 | 0.32 | 0 | 0.59 | 0.9072 | 0.1819 | 0.8384 | 1.9655 | 0 | 17229 | 11925 | 4602 | 6427 | 20411 | 62064 | 10585 | 8900 | 11305 | 11398 | 4082 | 32821 | 4572 | 30385 | 6621 | 21398 | 3497 | 16902 | 27868 | 4842 | 23106 | 16556 | 51183 | 21315 | 24164 | 25712 | 2528 | 4856 | 4391 | 11929 | 35696 | 6308 | 52977 | 1537 | 8021 | 70104 | 18950 | 12954 | 22961 | 37204 | 13536 | 24708 | 6252 | 41227 | 3094 | 11156 | 14300 | 1963 | 4483 | 2674 | 21605 | 38920 | 1589 | 2894 | 1251 | 8193 | 834 | 14518 | 22841 | 7278 | 4799 | 896 | 1739 | 11736 |
GCF_000025625.1 | NC_013923 | NC_013923.1 | Natrialba magadii ATCC 43099 plasmid pNMAG01; complete sequence. | 73820 | 77172 | 113625 | 113731 | 0 | 378348 | 0.2 | 0.2 | 0.3 | 0.3 | 0 | 0.6 | 0.9389 | 0.0227 | 0.9778 | 1.9703 | 152 | 177 | 329 | 63165 | 54277 | 93878 | 94494 | 0 | 305814 | 0.21 | 0.18 | 0.3 | 0.31 | 0 | 0.61 | 0.8893 | 0.1938 | 0.834 | 1.9494 | 159 | 148 | 171 | 319 | 60825 | 52499 | 91345 | 91509 | 0 | 296178 | 0.21 | 0.18 | 0.3 | 0.3 | 0 | 0.61 | 0.889 | 0.1956 | 0.8327 | 1.9489 | 159 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 1 | 1 | 14 | 15 | 19 | 24 | 0 | 72 | 0.19 | 0.21 | 0.26 | 0.33 | 0 | 0.6 | 0.8747 | 0.1508 | 0.8625 | 1.9664 | 0 | 2 | 4 | 6 | 1922 | 1403 | 1954 | 2398 | 0 | 7677 | 0.22 | 0.18 | 0.28 | 0.31 | 0 | 0.59 | 0.9 | 0.162 | 0.8557 | 1.9651 | 0 | 1769 | 895 | 453 | 650 | 2251 | 5280 | 1021 | 1010 | 982 | 1089 | 397 | 3161 | 433 | 3171 | 666 | 2001 | 340 | 1676 | 2765 | 531 | 2245 | 1620 | 4756 | 2161 | 2185 | 2308 | 244 | 554 | 508 | 1254 | 3636 | 709 | 5168 | 193 | 904 | 5953 | 1908 | 1095 | 2267 | 3209 | 1210 | 1816 | 599 | 3721 | 293 | 1314 | 1585 | 254 | 432 | 278 | 2083 | 3775 | 159 | 284 | 165 | 829 | 90 | 1381 | 2381 | 641 | 502 | 60 | 169 | 1287 |
GCF_000025625.1 | NC_013924 | NC_013924.1 | Natrialba magadii ATCC 43099 plasmid pNMAG02; complete sequence. | 54677 | 55402 | 72601 | 72270 | 0 | 254950 | 0.21 | 0.22 | 0.28 | 0.28 | 0 | 0.57 | 0.944 | 0.0089 | 0.9912 | 1.9865 | 104 | 107 | 211 | 42651 | 37361 | 54940 | 57169 | 0 | 192121 | 0.23 | 0.2 | 0.28 | 0.29 | 0 | 0.58 | 0.8987 | 0.1817 | 0.8416 | 1.9671 | 74 | 103 | 105 | 208 | 42282 | 37006 | 54333 | 56585 | 0 | 190206 | 0.23 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.8989 | 0.1824 | 0.8413 | 1.9674 | 76 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1066 | 648 | 447 | 594 | 1289 | 3199 | 889 | 832 | 569 | 829 | 430 | 2397 | 432 | 1643 | 497 | 1295 | 334 | 1153 | 1614 | 529 | 1216 | 1114 | 2668 | 1834 | 1225 | 1351 | 254 | 481 | 524 | 1053 | 2113 | 664 | 2840 | 223 | 707 | 3300 | 1164 | 648 | 1390 | 1772 | 705 | 968 | 623 | 1753 | 194 | 1026 | 1097 | 197 | 323 | 342 | 1192 | 1930 | 216 | 323 | 139 | 705 | 39 | 1005 | 1213 | 563 | 590 | 50 | 130 | 850 |
GCF_000025625.1 | NC_013925 | NC_013925.1 | Natrialba magadii ATCC 43099 plasmid pNMAG03; complete sequence. | 12547 | 9737 | 17661 | 18542 | 0 | 58487 | 0.21 | 0.17 | 0.3 | 0.32 | 0 | 0.62 | 0.9108 | 0.1504 | 0.8643 | 1.9541 | 82 | 11 | 93 | 12012 | 8634 | 16537 | 17549 | 0 | 54732 | 0.22 | 0.16 | 0.3 | 0.32 | 0 | 0.62 | 0.8784 | 0.2285 | 0.806 | 1.9415 | 327 | 82 | 11 | 93 | 12012 | 8634 | 16537 | 17549 | 0 | 54732 | 0.22 | 0.16 | 0.3 | 0.32 | 0 | 0.62 | 0.8784 | 0.2285 | 0.806 | 1.9415 | 327 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 371 | 347 | 74 | 99 | 193 | 1450 | 194 | 56 | 214 | 291 | 60 | 503 | 77 | 513 | 110 | 475 | 67 | 220 | 485 | 44 | 360 | 237 | 729 | 469 | 452 | 339 | 52 | 57 | 39 | 185 | 793 | 86 | 831 | 24 | 112 | 1451 | 357 | 234 | 430 | 514 | 274 | 389 | 125 | 678 | 131 | 164 | 242 | 40 | 41 | 55 | 400 | 661 | 18 | 49 | 35 | 107 | 12 | 296 | 422 | 113 | 89 | 17 | 64 | 228 |