Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_030273315.1 | NZ_CP127174 | NZ_CP127174.1 | Natrialbaceae archaeon AArc-T1-2 chromosome; complete genome. | 551386 | 558600 | 985654 | 985172 | 0 | 3080812 | 0.18 | 0.18 | 0.32 | 0.32 | 0 | 0.64 | 0.9313 | 0.0067 | 0.9933 | 1.9429 | 1593 | 1547 | 3140 | 511291 | 430522 | 867869 | 871449 | 0 | 2681131 | 0.19 | 0.16 | 0.32 | 0.32 | 0 | 0.64 | 0.8753 | 0.1902 | 0.837 | 1.9237 | 1691 | 1540 | 1507 | 3047 | 502294 | 422523 | 854358 | 856961 | 0 | 2636136 | 0.19 | 0.16 | 0.32 | 0.32 | 0 | 0.64 | 0.8751 | 0.1906 | 0.8368 | 1.9234 | 1636 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 2 | 2 | 135 | 84 | 237 | 256 | 0 | 712 | 0.19 | 0.12 | 0.33 | 0.36 | 0 | 0.69 | 0.875 | 0.2645 | 0.7794 | 1.8751 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 31 | 16 | 47 | 651 | 703 | 1089 | 1186 | 0 | 3629 | 0.18 | 0.19 | 0.3 | 0.33 | 0 | 0.63 | 0.8756 | 0.1567 | 0.8609 | 1.9418 | 0 | 4 | 6 | 10 | 3221 | 2353 | 3658 | 4426 | 0 | 13658 | 0.22 | 0.16 | 0.3 | 0.33 | 0 | 0.62 | 0.8895 | 0.2312 | 0.7962 | 1.9405 | 0 | 14532 | 8584 | 3312 | 2722 | 11062 | 60248 | 5894 | 3415 | 8312 | 9767 | 1845 | 23732 | 2034 | 27805 | 3509 | 16638 | 1775 | 14249 | 23028 | 4558 | 19820 | 10391 | 45259 | 13324 | 16735 | 22543 | 1572 | 4864 | 3084 | 10203 | 31661 | 4775 | 57774 | 1372 | 3316 | 63289 | 16223 | 14478 | 20991 | 39165 | 10937 | 19593 | 6664 | 37094 | 2140 | 6190 | 13725 | 1833 | 4742 | 1651 | 18583 | 36560 | 1721 | 1513 | 1482 | 3686 | 631 | 19096 | 20811 | 6367 | 2830 | 623 | 1811 | 10565 |
GCF_030273315.1 | NZ_CP127175 | NZ_CP127175.1 | Natrialbaceae archaeon AArc-T1-2 plasmid plAArc-T1-2-L; complete sequence. | 39484 | 41882 | 55296 | 54287 | 0 | 190949 | 0.21 | 0.22 | 0.29 | 0.28 | 0 | 0.57 | 0.9405 | 0.0387 | 0.9622 | 1.9839 | 59 | 109 | 168 | 33456 | 27778 | 42408 | 43639 | 0 | 147281 | 0.23 | 0.19 | 0.29 | 0.3 | 0 | 0.58 | 0.8956 | 0.1855 | 0.8386 | 1.9585 | 96 | 57 | 102 | 159 | 32861 | 27200 | 41651 | 42801 | 0 | 144513 | 0.23 | 0.19 | 0.29 | 0.3 | 0 | 0.58 | 0.8962 | 0.1854 | 0.8388 | 1.9579 | 97 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 713 | 643 | 334 | 413 | 865 | 2742 | 657 | 549 | 449 | 647 | 379 | 1661 | 321 | 1347 | 352 | 976 | 246 | 804 | 1115 | 401 | 953 | 748 | 2020 | 1329 | 1089 | 1051 | 254 | 349 | 411 | 633 | 1473 | 500 | 2022 | 259 | 491 | 2769 | 888 | 530 | 1155 | 1435 | 571 | 811 | 566 | 1232 | 159 | 655 | 742 | 151 | 279 | 286 | 797 | 1429 | 203 | 219 | 109 | 441 | 36 | 876 | 930 | 476 | 436 | 41 | 87 | 665 |
GCF_030273315.1 | NZ_CP127176 | NZ_CP127176.1 | Natrialbaceae archaeon AArc-T1-2 plasmid plAArc-T1-2-S; complete sequence. | 18525 | 20570 | 23697 | 23549 | 0 | 86341 | 0.21 | 0.24 | 0.27 | 0.27 | 0 | 0.55 | 0.9458 | 0.0554 | 0.9472 | 1.9927 | 14 | 51 | 65 | 17842 | 13714 | 19045 | 19572 | 0 | 70173 | 0.25 | 0.19 | 0.27 | 0.29 | 0 | 0.56 | 0.9042 | 0.1987 | 0.8282 | 1.9734 | 68 | 14 | 51 | 65 | 17842 | 13714 | 19045 | 19572 | 0 | 70173 | 0.25 | 0.19 | 0.27 | 0.29 | 0 | 0.56 | 0.9042 | 0.1987 | 0.8282 | 1.9734 | 68 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 334 | 425 | 161 | 251 | 427 | 1352 | 326 | 314 | 250 | 304 | 276 | 1038 | 224 | 468 | 236 | 518 | 178 | 289 | 646 | 142 | 416 | 351 | 927 | 835 | 584 | 399 | 134 | 177 | 241 | 345 | 757 | 300 | 724 | 104 | 275 | 1229 | 376 | 235 | 545 | 483 | 275 | 347 | 368 | 418 | 84 | 299 | 329 | 104 | 122 | 151 | 362 | 466 | 102 | 157 | 84 | 303 | 17 | 427 | 339 | 267 | 322 | 18 | 30 | 404 |