GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_900110455.1	NZ_FOIS01000008	NZ_FOIS01000008.1	Natrinema salifodinae strain CGMCC 1.12284; whole genome shotgun sequence.	230	310	444	360	0	1344	0.17	0.23	0.33	0.27	0.6	0.9195	0.2526	0.7764	1.9609	0	1	1	298	219	337	425	1279	0.23	0.17	0.26	0.33	0.6	0.9197	0.2683	0.7639	1.9608	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	298	219	337	425	1279	0.23	0.17	0.26	0.33	0	0.6	0.9197	0.2683	0.7639	1.9608	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_900110455.1	NZ_FOIS01000006	NZ_FOIS01000006.1	Natrinema salifodinae strain CGMCC 1.12284; whole genome shotgun sequence.	15489	15323	29095	28724	0	88631	0.17	0.17	0.33	0.32	0.65	0.9205	0.0118	0.9883	1.9319	52	38	90	13256	11540	25039	24341	74176	0.19	0.16	0.33	0.33	0.66	0.872	0.1919	0.8359	1.9113	39	50	38	88	13034	11378	24761	24033	73206	0.18	0.16	0.33	0.33	0	0.66	0.8721	0.1915	0.8363	1.9102	39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	379	240	80	74	178	1438	114	104	303	271	65	644	48	778	68	459	40	395	737	87	688	196	1261	382	489	687	50	95	64	215	933	82	1558	23	44	1729	410	402	558	1185	327	660	112	1145	91	146	429	21	79	49	563	1330	31	32	37	60	16	583	646	92	90	32	40	238
GCF_900110455.1	NZ_FOIS01000007	NZ_FOIS01000007.1	Natrinema salifodinae strain CGMCC 1.12284; whole genome shotgun sequence.	10751	10315	15669	14826	0	51561	0.21	0.2	0.3	0.29	0.59	0.9321	0.0483	0.9528	1.9753	33	36	69	10018	7494	13012	13163	43687	0.23	0.17	0.29	0.31	0.6	0.8861	0.2579	0.7822	1.9508	126	31	36	67	9719	7254	12615	12727	42315	0.23	0.17	0.29	0.31	0	0.6	0.8856	0.2591	0.7814	1.9503	118	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	238	227	69	110	227	779	157	119	113	204	126	470	82	431	102	382	75	219	325	74	284	161	583	331	290	275	50	87	100	182	441	103	616	34	127	885	268	153	330	414	173	333	195	510	83	150	190	41	62	44	334	453	36	38	24	129	12	213	338	102	171	20	35	176
GCF_900110455.1	NZ_FOIS01000005	NZ_FOIS01000005.1	Natrinema salifodinae strain CGMCC 1.12284; whole genome shotgun sequence.	60469	60392	101263	101056	0	323180	0.19	0.19	0.31	0.31	0.63	0.9316	0.0017	0.9983	1.9537	135	126	261	48937	41404	80357	82267	252965	0.2	0.17	0.31	0.32	0.64	0.8813	0.1888	0.8367	1.9313	135	130	126	256	48645	41112	79829	81754	251340	0.2	0.17	0.31	0.32	0	0.64	0.8817	0.1895	0.8362	1.9312	135	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	70	62	95	87	314	0.22	0.19	0.31	0.28	0	0.59	0.8713	0.1246	0.885	1.9554	1527	978	343	255	641	4580	478	492	891	1132	328	2439	156	2943	341	1821	132	1404	2466	324	2020	819	4006	1616	1630	1960	214	429	347	1173	3381	395	4836	174	191	5450	1540	1171	2185	3111	1183	1847	534	3378	364	728	1763	139	308	176	1842	4201	166	121	146	220	58	1786	2497	349	460	65	133	997
GCF_900110455.1	NZ_FOIS01000004	NZ_FOIS01000004.1	Natrinema salifodinae strain CGMCC 1.12284; whole genome shotgun sequence.	136729	136355	271421	273896	0	818401	0.17	0.17	0.33	0.33	0.67	0.9206	0.0059	0.9941	1.9186	392	392	784	123001	102447	237034	233777	696259	0.18	0.15	0.34	0.33	0.67	0.8696	0.1909	0.8364	1.9007	346	383	382	765	122264	101693	235539	232340	691836	0.18	0.15	0.34	0.33	0	0.67	0.8694	0.1906	0.8367	1.9	346	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	86	51	153	159	449	0.19	0.11	0.34	0.35	0	0.69	0.8859	0.2747	0.7776	1.8728	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	5	13	168	196	287	320	971	0.17	0.2	0.3	0.33	0	0.63	0.8681	0.2251	0.8079	1.9318	0	1	1	20	26	26	30	102	0.2	0.25	0.25	0.29	0	0.55	0.8617	0.2019	0.8179	1.9855	3904	2824	481	518	1249	15436	949	760	2481	2479	460	5452	259	6643	603	4480	285	3500	6616	587	6917	1712	10988	3114	4678	6709	360	826	564	1815	8725	610	15052	159	404	17365	4012	4143	5389	12147	3233	7050	949	11993	1021	1104	4234	193	722	283	5226	12096	296	312	366	426	138	5551	5821	709	713	200	427	1894
GCF_900110455.1	NZ_FOIS01000002	NZ_FOIS01000002.1	Natrinema salifodinae strain CGMCC 1.12284; whole genome shotgun sequence.	160987	162654	303721	301570	0	928932	0.17	0.18	0.33	0.32	0.65	0.9272	0.0087	0.9913	1.9326	461	439	900	144663	119812	260780	257582	782837	0.19	0.16	0.33	0.33	0.66	0.8732	0.198	0.8311	1.9089	411	446	430	876	143652	118745	258643	255435	776475	0.19	0.16	0.33	0.33	0	0.66	0.8732	0.1982	0.8311	1.9086	400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	53	42	102	115	312	0.17	0.13	0.33	0.37	0	0.7	0.875	0.1757	0.8397	1.882	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9	5	14	184	213	316	342	1055	0.17	0.2	0.3	0.33	0	0.62	0.8777	0.2157	0.817	1.9394	1	0	1	24	16	46	36	122	0.2	0.13	0.38	0.3	0	0.67	0.8479	0.322	0.7246	1.896	4402	3255	709	758	1605	16880	1252	1123	2874	2977	756	6584	503	7446	776	5289	478	3785	7462	769	7635	2197	12237	4050	5253	7454	528	1060	913	2255	9997	888	15898	276	656	19254	4381	4220	6234	12390	3687	7264	1198	12516	1024	1499	4609	303	801	456	5563	12930	460	416	455	661	175	5695	6669	891	1075	236	465	2318
GCF_900110455.1	NZ_FOIS01000003	NZ_FOIS01000003.1	Natrinema salifodinae strain CGMCC 1.12284; whole genome shotgun sequence.	150493	149276	287454	288890	2236	878349	0.17	0.17	0.33	0.33	0.66	0.9272	0.0066	0.9935	1.9256	418	463	881	136506	113370	251568	249771	751215	0.19	0.15	0.33	0.33	0.66	0.8712	0.1954	0.8335	1.907	540	415	454	869	135847	112752	250176	248405	747180	0.19	0.15	0.33	0.33	0	0.66	0.8711	0.1961	0.833	1.9067	540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	7	9	122	131	196	217	666	0.18	0.2	0.29	0.33	0	0.62	0.8879	0.1665	0.8529	1.9455	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4032	3168	663	715	1622	16378	1299	910	2707	2904	680	6163	390	7382	784	4936	358	3791	7229	693	7172	2169	11756	3941	5086	7023	450	982	770	2102	9191	867	15496	222	556	18424	4443	4181	5952	12096	3459	7159	1126	12450	1087	1425	4483	237	753	438	5440	12544	316	406	403	617	165	5682	6511	899	888	224	480	2185
GCF_900110455.1	NZ_FOIS01000001	NZ_FOIS01000001.1	Natrinema salifodinae strain CGMCC 1.12284; whole genome shotgun sequence.	201939	203623	388656	387549	0	1181767	0.17	0.17	0.33	0.33	0.66	0.9262	0.0056	0.9944	1.9278	546	561	1107	177221	151378	332896	327245	988740	0.18	0.16	0.33	0.33	0.66	0.8724	0.1845	0.8415	1.9086	622	537	548	1085	175634	150026	329940	324284	979884	0.18	0.15	0.33	0.33	0	0.66	0.8723	0.1857	0.8406	1.9081	622	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	9	14	205	203	342	348	1098	0.19	0.18	0.31	0.32	0	0.63	0.8636	0.1241	0.8878	1.9334	0	1	1	22	19	45	36	122	0.18	0.16	0.37	0.3	0	0.66	0.8809	0.1843	0.8318	1.9138	5373	3818	859	812	1868	20407	1503	1241	3645	3601	865	7831	444	10120	944	6646	457	5089	9735	1001	9518	2674	15809	4878	6444	9209	580	1407	999	3018	12788	1033	20902	319	564	23548	5894	5376	7902	15778	4625	8900	1379	15934	1357	1849	6037	315	1030	512	7535	17179	495	452	543	681	205	7379	9249	1085	1131	273	607	2977