GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_020405225.1	NZ_CP084472	NZ_CP084472.1	Natrinema sp. DC36 chromosome; complete genome.	752054	755008	1302161	1299927	4109150	0.18	0.18	0.32	0.32	0.63	0.932	0.0028	0.9972	1.9481	2031	2127	4158	659941	556316	1098840	1113267	3428364	0.2	0.17	0.31	0.32	0.64	0.8774	0.1939	0.8337	1.9259	2516	1976	2084	4060	648687	546896	1082338	1095693	3373614	0.2	0.17	0.31	0.32	0.64	0.8773	0.1945	0.8333	1.9255	2498	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	2	131	89	231	242	693	0.19	0.13	0.33	0.35	0	0.68	0.8819	0.2152	0.8177	1.8922	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	33	18	51	735	795	1144	1261	3935	0.18	0.2	0.29	0.32	0	0.62	0.8751	0.1982	0.8294	1.9419	7	3	10	3390	2541	3462	4277	13670	0.23	0.18	0.28	0.31	0	0.59	0.9047	0.1979	0.8224	1.9656	19551	13432	3832	4476	9947	71646	7384	6594	12576	12610	4549	30391	2681	35203	5240	23083	2548	18293	31988	4637	28164	13194	56202	22567	22714	29670	2528	5028	4965	13179	42908	4600	64239	2095	3511	74022	19365	17803	25256	46735	15703	26914	7064	47302	4089	9205	20817	1922	4244	2625	25594	52934	1563	1730	1743	3370	919	22550	28053	5072	4568	975	2166	14010
GCF_020405225.1	NZ_CP084473	NZ_CP084473.1	Natrinema sp. DC36 plasmid unnamed1; complete sequence.	68629	67140	91922	92702	320393	0.21	0.21	0.29	0.29	0.58	0.9455	0.0152	0.9849	1.9831	163	127	290	49925	41092	65694	68586	225297	0.23	0.19	0.28	0.3	0.58	0.8939	0.1852	0.839	1.96	169	159	120	279	48378	39690	63518	66448	218034	0.23	0.19	0.28	0.3	0.58	0.894	0.1862	0.8383	1.9597	169	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1416	1042	486	586	1089	4090	820	728	796	920	487	2552	443	2122	572	1604	317	1235	1962	450	1357	1131	3000	1892	1587	1586	296	448	508	1104	2712	599	3180	280	566	4125	1236	896	1591	2129	917	1355	724	2317	235	887	1194	206	363	358	1371	2426	230	236	157	478	72	1295	1613	577	554	70	137	966
GCF_020405225.1	NZ_CP084474	NZ_CP084474.1	Natrinema sp. DC36 plasmid unnamed2; complete sequence.	74150	76225	92835	91124	334334	0.22	0.23	0.28	0.27	0.55	0.9496	0.0231	0.9772	1.9926	132	173	305	53042	47311	64928	66541	231822	0.24	0.2	0.28	0.28	0.56	0.8981	0.1974	0.8293	1.9717	293	126	168	294	51738	45819	63129	64668	225354	0.24	0.2	0.28	0.28	0.56	0.8984	0.1974	0.8292	1.9717	250	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1366	1117	609	808	1433	3725	1048	1047	721	969	680	2672	628	1985	657	1491	440	1180	2147	686	1502	1156	3240	2260	1620	1451	402	640	669	1186	2802	971	3048	369	834	3452	1124	799	1496	1831	908	1073	849	1769	188	1146	1220	223	344	473	1374	2153	322	360	165	721	70	1224	1443	679	801	86	138	1128
GCF_020405225.1	NZ_CP084475	NZ_CP084475.1	Natrinema sp. DC36 plasmid unnamed3; complete sequence.	36554	34947	45236	45252	161989	0.23	0.22	0.28	0.28	0.56	0.9425	0.0227	0.9778	1.9899	81	57	138	25307	22107	31766	32948	112128	0.23	0.2	0.28	0.29	0.57	0.8969	0.186	0.8386	1.9694	92	78	53	131	24288	21185	30640	31800	107913	0.23	0.2	0.28	0.29	0.57	0.8972	0.1839	0.8402	1.9688	66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	643	536	242	318	608	1843	492	444	341	477	336	1257	272	951	333	749	209	620	1015	291	715	526	1549	942	828	644	183	253	329	512	1399	368	1498	138	395	1825	548	369	748	960	451	588	357	964	126	497	635	99	196	240	687	1096	119	155	84	321	38	658	665	341	351	33	60	504
GCF_020405225.1	NZ_CP084476	NZ_CP084476.1	Natrinema sp. DC36 plasmid unnamed4; complete sequence.	15458	15656	24297	24172	79583	0.19	0.2	0.31	0.3	0.61	0.9331	0.0089	0.9911	1.9654	64	57	121	14898	11193	21049	21201	68341	0.22	0.16	0.3	0.31	0.62	0.8826	0.2215	0.8124	1.9429	243	64	56	120	14371	10828	20316	20471	65986	0.22	0.16	0.3	0.31	0.62	0.8824	0.2218	0.8121	1.9429	243	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	362	299	107	110	277	1150	148	163	233	398	121	727	98	746	137	492	78	409	516	109	391	233	984	441	363	544	91	132	134	243	633	113	770	73	172	1502	438	308	525	750	278	499	274	810	155	227	371	51	159	80	550	861	48	48	46	136	23	370	609	143	235	31	67	403
GCF_020405225.1	NZ_CP084477	NZ_CP084477.1	Natrinema sp. DC36 plasmid unnamed5; complete sequence.	10242	11981	18080	17639	57942	0.18	0.21	0.31	0.3	0.62	0.9285	0.0906	0.9152	1.9587	19	64	83	10671	8125	15028	15901	49725	0.21	0.17	0.3	0.32	0.62	0.88	0.2077	0.8208	1.9432	155	19	64	83	10671	8125	15028	15901	49725	0.21	0.17	0.3	0.32	0.62	0.88	0.2077	0.8208	1.9432	155	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	245	289	58	111	263	1148	183	69	171	262	90	401	88	438	124	388	67	182	351	48	318	292	717	474	436	307	49	60	79	182	674	95	727	25	135	1167	318	156	368	513	222	357	117	652	108	163	300	26	68	78	404	512	19	80	35	139	10	327	378	128	115	12	61	196
GCF_020405225.1	NZ_CP084478	NZ_CP084478.1	Natrinema sp. DC36 plasmid unnamed6; complete sequence.	6974	7235	9945	9778	33932	0.21	0.21	0.29	0.29	0.58	0.9321	0.0268	0.9736	1.9807	19	36	55	6823	5395	8273	9155	29646	0.23	0.19	0.27	0.31	0.58	0.887	0.2115	0.8181	1.9641	135	19	35	54	6749	5297	8158	9040	29244	0.23	0.19	0.27	0.31	0.58	0.8868	0.2128	0.817	1.9638	131	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	207	172	41	78	163	562	105	60	102	177	91	272	70	252	73	230	63	125	242	43	215	146	373	321	270	166	33	45	64	190	433	68	392	32	90	523	122	60	216	242	138	166	94	259	63	113	202	49	35	59	203	311	26	41	34	99	8	138	207	86	88	11	35	154