Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_019879105.1 | NZ_CP082249 | NZ_CP082249.1 | Natrinema sp. SYSU A 869 chromosome; complete genome. | 722400 | 722502 | 1228429 | 1228924 | 0 | 3902255 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.63 | 0.9358 | 0.0003 | 0.9997 | 1.9509 | 1861 | 1834 | 3695 | 586634 | 499297 | 970359 | 974742 | 0 | 3031032 | 0.2 | 0.17 | 0.32 | 0.32 | 0 | 0.64 | 0.8811 | 0.1858 | 0.8399 | 1.9323 | 3015 | 1801 | 1770 | 3571 | 574407 | 488791 | 953564 | 956550 | 0 | 2973312 | 0.2 | 0.17 | 0.32 | 0.32 | 0 | 0.64 | 0.8809 | 0.1862 | 0.8397 | 1.9318 | 2666 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 1 | 1 | 2 | 167 | 128 | 294 | 312 | 0 | 901 | 0.18 | 0.14 | 0.32 | 0.35 | 0 | 0.67 | 0.8764 | 0.1722 | 0.8458 | 1.9051 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23 | 28 | 51 | 700 | 773 | 1132 | 1239 | 0 | 3844 | 0.18 | 0.2 | 0.3 | 0.32 | 0 | 0.62 | 0.8779 | 0.1768 | 0.8461 | 1.9439 | 0 | 4 | 6 | 10 | 3419 | 2556 | 3439 | 4259 | 0 | 13673 | 0.23 | 0.18 | 0.28 | 0.31 | 0 | 0.59 | 0.9054 | 0.2013 | 0.8199 | 1.9677 | 0 | 17121 | 11433 | 3485 | 4891 | 11951 | 62353 | 7727 | 6165 | 10882 | 11060 | 3993 | 26460 | 3187 | 30410 | 4877 | 19749 | 2165 | 15004 | 27484 | 4123 | 23972 | 12587 | 48884 | 20996 | 19940 | 26338 | 2602 | 4767 | 5117 | 10928 | 37239 | 4566 | 57630 | 1464 | 4217 | 64473 | 16593 | 15541 | 20918 | 41521 | 13867 | 23086 | 5785 | 41545 | 3269 | 8324 | 17564 | 1492 | 4350 | 2893 | 22141 | 43245 | 1509 | 1974 | 1399 | 3987 | 776 | 19941 | 24056 | 5148 | 4522 | 953 | 1855 | 12607 |
GCF_019879105.1 | NZ_CP082247 | NZ_CP082247.1 | Natrinema sp. SYSU A 869 plasmid unnamed1; complete sequence. | 189199 | 188157 | 256915 | 257146 | 0 | 891417 | 0.21 | 0.21 | 0.29 | 0.29 | 0 | 0.58 | 0.9436 | 0.0032 | 0.9968 | 1.983 | 339 | 352 | 691 | 126351 | 106291 | 167847 | 173249 | 0 | 573738 | 0.22 | 0.19 | 0.29 | 0.3 | 0 | 0.59 | 0.8937 | 0.1731 | 0.8483 | 1.9611 | 726 | 318 | 337 | 655 | 120950 | 101632 | 161605 | 166397 | 0 | 550584 | 0.22 | 0.19 | 0.29 | 0.3 | 0 | 0.59 | 0.8939 | 0.1728 | 0.8485 | 1.9608 | 611 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 0 | 1 | 13 | 16 | 19 | 24 | 0 | 72 | 0.18 | 0.22 | 0.26 | 0.33 | 0 | 0.6 | 0.8987 | 0.2197 | 0.8021 | 1.9636 | 0 | 3 | 0 | 3 | 1130 | 843 | 1133 | 1409 | 0 | 4515 | 0.24 | 0.18 | 0.27 | 0.31 | 0 | 0.58 | 0.9056 | 0.223 | 0.8019 | 1.9674 | 0 | 3234 | 2372 | 1044 | 1540 | 2927 | 10030 | 2067 | 1885 | 1858 | 2479 | 1451 | 6026 | 1144 | 5530 | 1328 | 3998 | 848 | 2848 | 4857 | 1097 | 3690 | 2723 | 7802 | 5313 | 4185 | 3932 | 756 | 1160 | 1462 | 2628 | 6681 | 1658 | 8128 | 623 | 1614 | 10188 | 3100 | 2190 | 4129 | 5332 | 2279 | 3204 | 1547 | 5477 | 704 | 2303 | 3158 | 515 | 839 | 1037 | 3702 | 6177 | 562 | 703 | 432 | 1285 | 152 | 3272 | 4213 | 1539 | 1577 | 174 | 344 | 2473 |
GCF_019879105.1 | NZ_CP082248 | NZ_CP082248.1 | Natrinema sp. SYSU A 869 plasmid unnamed2; complete sequence. | 193008 | 190913 | 247992 | 249089 | 0 | 881002 | 0.22 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9476 | 0.0077 | 0.9924 | 1.9881 | 357 | 316 | 673 | 114916 | 97680 | 148386 | 154437 | 0 | 515419 | 0.23 | 0.19 | 0.28 | 0.3 | 0 | 0.58 | 0.8953 | 0.1849 | 0.8387 | 1.9667 | 674 | 335 | 289 | 624 | 107297 | 91405 | 139544 | 144910 | 0 | 483156 | 0.23 | 0.19 | 0.28 | 0.3 | 0 | 0.58 | 0.8957 | 0.1846 | 0.8389 | 1.9663 | 650 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | NA | 0.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 1 | 2 | 26 | 32 | 41 | 48 | 0 | 147 | 0.18 | 0.22 | 0.28 | 0.32 | 0 | 0.61 | 0.8406 | 0.1702 | 0.8507 | 1.958 | 0 | 0 | 4 | 4 | 1148 | 866 | 1177 | 1447 | 0 | 4638 | 0.23 | 0.19 | 0.28 | 0.3 | 0 | 0.59 | 0.9013 | 0.1789 | 0.8386 | 1.9699 | 0 | 2885 | 2058 | 1109 | 1433 | 2785 | 8154 | 2041 | 1651 | 1768 | 2199 | 1359 | 5490 | 1090 | 4604 | 1304 | 3432 | 773 | 2764 | 4364 | 969 | 3255 | 2515 | 6811 | 4521 | 3511 | 3322 | 763 | 1190 | 1249 | 2698 | 5854 | 1675 | 6912 | 673 | 1561 | 8304 | 2525 | 1792 | 3429 | 4599 | 2063 | 2500 | 1552 | 4527 | 584 | 2142 | 2762 | 543 | 770 | 896 | 3103 | 5350 | 480 | 641 | 442 | 1333 | 127 | 2708 | 3534 | 1359 | 1471 | 153 | 362 | 2255 |