Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_023913515.1 | NZ_CP099391 | NZ_CP099391.1 | Natronococcus sp. CG52 chromosome; complete genome. | 706407 | 705201 | 1279466 | 1280900 | 0 | 3971974 | 0.18 | 0.18 | 0.32 | 0.32 | 0 | 0.64 | 0.9266 | 0.0014 | 0.9986 | 1.9388 | 1974 | 1924 | 3898 | 618740 | 521333 | 1082370 | 1093697 | 0 | 3316140 | 0.19 | 0.16 | 0.32 | 0.33 | 0 | 0.65 | 0.8737 | 0.1885 | 0.8384 | 1.919 | 2142 | 1914 | 1870 | 3784 | 607814 | 511819 | 1065366 | 1075794 | 0 | 3260793 | 0.19 | 0.16 | 0.32 | 0.33 | 0 | 0.65 | 0.8736 | 0.1891 | 0.838 | 1.9185 | 2040 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 1 | 2 | 153 | 99 | 267 | 278 | 0 | 797 | 0.19 | 0.13 | 0.33 | 0.35 | 0 | 0.69 | 0.8879 | 0.2265 | 0.8102 | 1.8874 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 29 | 22 | 51 | 693 | 771 | 1140 | 1244 | 0 | 3848 | 0.18 | 0.2 | 0.3 | 0.32 | 0 | 0.62 | 0.8775 | 0.1743 | 0.8478 | 1.944 | 0 | 4 | 6 | 10 | 3420 | 2541 | 3463 | 4245 | 0 | 13669 | 0.22 | 0.18 | 0.29 | 0.31 | 0 | 0.6 | 0.9006 | 0.1954 | 0.8255 | 1.9589 | 0 | 18466 | 13227 | 3734 | 3090 | 8332 | 75886 | 6076 | 4690 | 11831 | 12234 | 2725 | 28114 | 1780 | 34895 | 4108 | 22230 | 1792 | 17215 | 32144 | 3991 | 28875 | 11544 | 57378 | 16322 | 22543 | 28045 | 1819 | 3602 | 2773 | 14466 | 41411 | 4351 | 65832 | 1418 | 2265 | 74621 | 20080 | 16612 | 26728 | 46463 | 14702 | 26722 | 5212 | 47085 | 4229 | 8800 | 18029 | 1574 | 3929 | 1485 | 25006 | 52662 | 1154 | 1512 | 1783 | 2234 | 840 | 22538 | 29726 | 4774 | 2954 | 904 | 2040 | 13329 |
GCF_023913515.1 | NZ_CP099392 | NZ_CP099392.1 | Natronococcus sp. CG52 plasmid unnamed1; complete sequence. | 76956 | 77896 | 119751 | 118349 | 0 | 392952 | 0.2 | 0.2 | 0.3 | 0.3 | 0 | 0.61 | 0.9359 | 0.012 | 0.9881 | 1.9674 | 129 | 164 | 293 | 60769 | 52281 | 91117 | 94449 | 0 | 298616 | 0.21 | 0.18 | 0.3 | 0.31 | 0 | 0.61 | 0.8881 | 0.1707 | 0.8507 | 1.9468 | 436 | 122 | 159 | 281 | 59291 | 50905 | 89029 | 92336 | 0 | 291561 | 0.21 | 0.18 | 0.3 | 0.31 | 0 | 0.61 | 0.8883 | 0.1708 | 0.8507 | 1.9463 | 283 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1676 | 1086 | 545 | 511 | 1006 | 5709 | 764 | 687 | 1020 | 1369 | 526 | 3011 | 307 | 3144 | 577 | 2103 | 297 | 1516 | 2862 | 585 | 2226 | 1284 | 4500 | 2229 | 1937 | 2163 | 299 | 528 | 527 | 1655 | 3634 | 562 | 4826 | 242 | 400 | 5710 | 1875 | 1314 | 2600 | 3046 | 1295 | 1927 | 664 | 3346 | 404 | 1178 | 1645 | 311 | 421 | 268 | 2150 | 4159 | 209 | 226 | 230 | 374 | 64 | 1936 | 2780 | 622 | 527 | 63 | 160 | 1369 |
GCF_023913515.1 | NZ_CP099393 | NZ_CP099393.1 | Natronococcus sp. CG52 plasmid unnamed2; complete sequence. | 85861 | 82205 | 104908 | 105519 | 0 | 378493 | 0.23 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9471 | 0.0247 | 0.9758 | 1.9908 | 156 | 129 | 285 | 63176 | 51869 | 76014 | 78894 | 0 | 269953 | 0.24 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.8995 | 0.1723 | 0.8484 | 1.9713 | 204 | 151 | 121 | 272 | 62081 | 50988 | 74578 | 77508 | 0 | 265155 | 0.24 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.9004 | 0.171 | 0.8494 | 1.9716 | 182 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 1 | 1 | 12 | 13 | 22 | 20 | 0 | 67 | 0.18 | 0.19 | 0.33 | 0.3 | 0 | 0.63 | 0.8617 | 0.0876 | 0.9161 | 1.9516 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1472 | 1134 | 670 | 773 | 1579 | 4666 | 1038 | 1090 | 805 | 1040 | 887 | 3518 | 584 | 2415 | 710 | 2001 | 459 | 1256 | 2357 | 652 | 1559 | 1369 | 3567 | 2735 | 1764 | 1868 | 430 | 686 | 789 | 1520 | 3223 | 927 | 3566 | 380 | 905 | 4541 | 1490 | 940 | 2098 | 2317 | 1128 | 1276 | 998 | 2345 | 325 | 1403 | 1417 | 292 | 455 | 482 | 1675 | 2722 | 327 | 395 | 210 | 758 | 67 | 1334 | 1785 | 735 | 912 | 76 | 129 | 1359 |