GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_002177135.1	NZ_MWPH01000001	NZ_MWPH01000001.1	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100000; whole genome shotgun sequence.	252116	254305	398613	397770	1302804	0.19	0.2	0.31	0.31	0.61	0.9376	0.0054	0.9946	1.964	610	659	1269	231829	198745	356234	349010	1135818	0.21	0.18	0.31	0.31	0	0.61	0.8879	0.1806	0.8435	1.9487	710	597	647	1244	228346	195907	351190	343920	1119363	0.21	0.18	0.31	0.31	0	0.61	0.8879	0.1812	0.843	1.9488	702	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	56	45	99	112	312	0.18	0.14	0.32	0.36	0	0.68	0.8886	0.1705	0.8438	1.9038	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	7	10	136	140	230	251	757	0.18	0.19	0.3	0.33	0	0.63	0.88	0.1127	0.8958	1.9394	3	0	3	385	314	447	560	1706	0.2	0.17	0.31	0.32	0	0.63	0.8957	0.1606	0.8533	1.9436	6306	2964	1128	2288	8174	22255	4157	4377	3377	4331	1657	11679	1747	11430	2426	7061	1082	5475	9382	2779	8381	4532	19047	8733	7966	8624	698	2316	2199	3809	12108	2695	19955	458	3032	23915	6740	4927	7920	13794	4844	9355	3075	16371	962	4485	4966	549	1853	1233	7993	13452	653	979	331	3326	255	4480	7553	2351	2235	470	519	4907
GCF_002177135.1	NZ_MWPH01000002	NZ_MWPH01000002.1	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100001; whole genome shotgun sequence.	251903	250888	380243	378220	1261254	0.2	0.2	0.3	0.3	0.6	0.9398	0.0047	0.9953	1.9701	627	645	1272	227753	192567	333357	329967	1083644	0.21	0.18	0.3	0.3	0	0.61	0.8888	0.1901	0.8365	1.9509	704	611	629	1240	225636	190582	329883	326699	1072800	0.21	0.18	0.3	0.3	0	0.61	0.8889	0.1906	0.8362	1.9511	704	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	10	21	291	316	479	510	1596	0.18	0.2	0.3	0.32	0	0.62	0.8731	0.2102	0.8211	1.9381	0	1	1	22	19	37	35	113	0.19	0.17	0.33	0.31	0	0.64	0.8929	0.1009	0.9048	1.9433	6294	3249	1341	2584	7748	20824	4058	4256	3348	4112	1891	12042	1718	10166	2526	7043	1184	5111	8793	2592	7892	4967	17291	8922	7842	8024	805	2247	2131	3932	12071	2741	18578	607	3078	23022	6348	4475	7621	12596	4375	8679	3196	15055	939	4588	4775	573	1734	1298	7175	12129	743	1094	356	3321	257	4026	6881	2489	2233	477	506	4631
GCF_002177135.1	NZ_MWPH01000003	NZ_MWPH01000003.1	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100002; whole genome shotgun sequence.	146260	149555	234725	235103	765643	0.19	0.2	0.31	0.31	0.61	0.9356	0.0119	0.9882	1.9624	390	382	772	136110	115930	210388	206314	668742	0.2	0.18	0.31	0.31	0	0.62	0.8873	0.1856	0.8391	1.9456	262	381	374	755	135549	115434	209578	205439	666000	0.2	0.18	0.31	0.31	0	0.62	0.8873	0.1855	0.8393	1.9455	261	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	131	94	171	186	582	0.23	0.16	0.29	0.32	0	0.61	0.9012	0.2065	0.8185	1.9542	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	6	14	190	217	306	340	1053	0.18	0.21	0.29	0.32	0	0.61	0.864	0.2383	0.799	1.9403	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3841	1748	694	1440	4639	13359	2419	2536	2083	2556	1027	7060	973	6679	1343	4224	700	3381	5410	1573	4896	2746	11212	5138	4724	5224	471	1337	1201	2236	7392	1551	11824	295	1747	14093	3951	3052	4564	8495	2836	5865	1823	10020	610	2519	3070	362	1130	720	4648	7901	456	591	201	1924	181	2640	4516	1416	1327	274	300	2836
GCF_002177135.1	NZ_MWPH01000004	NZ_MWPH01000004.1	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100003; whole genome shotgun sequence.	64608	64572	94171	93735	317086	0.2	0.2	0.3	0.3	0.59	0.9411	0.0026	0.9974	1.9751	128	180	308	58034	48892	82279	81812	271017	0.22	0.18	0.3	0.3	0	0.6	0.8897	0.1901	0.8351	1.9535	239	123	177	300	57411	48414	81358	80855	268038	0.22	0.18	0.3	0.3	0	0.6	0.8898	0.191	0.8343	1.9537	231	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	28	30	43	48	149	0.18	0.19	0.3	0.33	0	0.63	0.8493	0.1165	0.8936	1.9381	1	1	2	44	38	74	70	226	0.19	0.17	0.33	0.31	0	0.64	0.8929	0.1009	0.9048	1.9433	1492	782	366	750	1890	5126	1025	1112	825	1088	510	2834	542	2782	623	1868	358	1355	2122	668	1808	1238	4188	2324	1924	2057	235	616	565	1122	3007	762	4477	189	945	5592	1521	1065	1856	2899	1090	1886	793	3456	275	1180	1270	177	407	407	1888	2819	228	295	110	885	72	1130	1801	647	629	93	135	1165
GCF_002177135.1	NZ_MWPH01000005	NZ_MWPH01000005.1	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100004; whole genome shotgun sequence.	35668	34980	40631	39987	151266	0.24	0.23	0.27	0.26	0.53	0.9436	0.0177	0.9824	1.9968	48	75	123	28163	23427	29997	30951	112538	0.25	0.21	0.26	0.27	0	0.54	0.9021	0.1738	0.8476	1.979	68	46	70	116	27431	22804	29198	29962	109395	0.25	0.21	0.26	0.27	0	0.54	0.9028	0.1709	0.8501	1.9795	69	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	553	475	246	463	830	1799	560	596	321	433	434	1513	407	885	429	751	264	466	856	374	582	603	1379	1482	856	595	219	308	433	546	1178	539	1215	179	519	1704	576	274	796	675	364	523	522	735	113	613	466	147	176	285	603	847	197	241	79	470	29	483	596	410	522	35	57	638
GCF_002177135.1	NZ_MWPH01000006	NZ_MWPH01000006.1	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100005; whole genome shotgun sequence.	25718	25114	30690	30423	111945	0.23	0.22	0.27	0.27	0.55	0.9451	0.0163	0.9839	1.9939	44	38	82	20220	16773	23616	24466	85075	0.25	0.2	0.27	0.28	0	0.55	0.9019	0.1927	0.8331	1.9744	26	41	37	78	18779	15635	21995	22845	79254	0.25	0.2	0.27	0.28	0	0.55	0.9015	0.1939	0.8322	1.974	22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	463	267	191	291	549	1325	388	371	261	294	255	1103	224	749	221	578	156	411	647	241	483	449	1069	927	526	618	120	239	232	424	797	317	1032	106	361	1390	398	236	516	635	304	387	317	699	81	459	359	86	119	146	445	783	106	121	51	285	13	370	425	251	302	26	39	384
GCF_002177135.1	NZ_MWPH01000007	NZ_MWPH01000007.1	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100006; whole genome shotgun sequence.	826	627	823	985	3261	0.25	0.19	0.25	0.3	0.55	0.929	0.2266	0.7973	1.9822	2	0	2	779	575	761	928	3043	0.22	0.18	0.28	0.31	0	0.6	0.9071	0.1517	0.8645	1.9615	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	779	575	761	928	3043	0.22	0.18	0.28	0.31	0	0.6	0.9071	0.1517	0.8645	1.9615	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_002177135.1	NZ_MWPH01000008	NZ_MWPH01000008.1	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100007; whole genome shotgun sequence.	354	324	263	101	1042	0.34	0.31	0.25	0.1	0.35	0.8948	0.4893	0.6496	1.8808	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0