GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_009392895.1	NZ_CP045488	NZ_CP045488.1	Natronorubrum aibiense strain 7-3 chromosome; complete genome.	629839	629801	1048114	1045240	3352994	0.19	0.19	0.31	0.31	0.62	0.935	0.0014	0.9986	1.9549	1659	1673	3332	561888	476279	913132	895865	2847164	0.2	0.17	0.32	0.31	0.63	0.8818	0.1873	0.839	1.9354	1827	1611	1625	3236	551412	467682	899447	880843	2799384	0.2	0.17	0.32	0.31	0.63	0.8817	0.1876	0.8389	1.9351	1730	NA	NA	NA	NA	NA	NA	NA	0	0	NA	2	2	162	108	289	295	854	0.19	0.13	0.34	0.35	0	0.68	0.8799	0.2092	0.8225	1.8922	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	26	25	51	695	768	1133	1245	3841	0.18	0.2	0.3	0.33	0	0.62	0.8767	0.1904	0.8357	1.9418	7	10	17	5647	4206	5784	7182	22819	0.22	0.18	0.29	0.31	0	0.6	0.9011	0.1832	0.8363	1.9618	16315	8756	2876	4358	12769	54552	7946	5781	8425	10609	3110	27989	2811	30915	4821	18697	1951	14613	24746	5490	22399	11708	47343	17204	19345	22851	1859	5716	4472	9275	35551	5073	55462	1081	4865	62538	16757	13598	20780	39832	12117	21913	8215	40302	2272	8099	14319	1443	4846	2450	21296	37501	1746	1859	835	5334	635	14678	21918	5967	4817	977	1625	12724
GCF_009392895.1	NZ_CP045489	NZ_CP045489.1	Natronorubrum aibiense strain 7-3 plasmid unnamed1.	96092	99134	118115	118136	431477	0.22	0.23	0.27	0.27	0.55	0.9502	0.0157	0.9846	1.9934	139	223	362	75612	65129	88586	91314	320641	0.24	0.21	0.27	0.28	0.56	0.9004	0.1745	0.8476	1.9735	232	134	215	349	74315	63893	87075	89711	314994	0.24	0.21	0.27	0.28	0.56	0.9007	0.1734	0.8485	1.9733	232	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1897	1523	752	1078	2112	5198	1509	1504	876	1438	1134	3922	894	2578	973	2235	690	1635	2824	935	1800	1821	4192	3275	2225	1923	540	818	1049	1637	3523	1468	3994	478	1337	5067	1677	1047	2372	2461	1192	1715	1331	2570	419	1650	1550	344	540	756	1755	2783	437	613	235	1117	86	1568	1834	1055	1152	90	173	1622
GCF_009392895.1	NZ_CP045490	NZ_CP045490.1	Natronorubrum aibiense strain 7-3 plasmid unnamed2.	73323	72481	105120	105778	356702	0.21	0.2	0.29	0.3	0.59	0.939	0.0089	0.9911	1.9758	157	146	303	59934	51523	86344	87018	284819	0.21	0.18	0.3	0.3	0.6	0.8914	0.1744	0.848	1.9556	160	155	144	299	59424	51094	85602	86249	282369	0.21	0.18	0.3	0.3	0.6	0.8914	0.175	0.8475	1.9556	161	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	18	13	22	22	75	0.24	0.17	0.29	0.29	0	0.59	0.9044	0.1613	0.8611	1.9704	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1675	862	429	590	1652	4806	938	814	861	1214	506	3154	404	3064	640	2052	276	1622	2658	639	2086	1382	4481	2251	1876	2107	256	669	582	1421	3648	739	4678	209	757	5386	1726	1104	2209	3029	1173	1637	876	3319	239	1108	1557	228	492	358	2103	3528	212	253	120	661	61	1374	2291	739	723	72	173	1373
GCF_009392895.1	NZ_CP045491	NZ_CP045491.1	Natronorubrum aibiense strain 7-3 plasmid unnamed3.	39287	41374	63713	62936	207310	0.19	0.2	0.31	0.3	0.61	0.9272	0.032	0.9687	1.964	86	94	180	33313	28719	52724	51771	166527	0.21	0.17	0.31	0.31	0.62	0.8866	0.1706	0.8522	1.9458	125	86	94	180	33313	28719	52724	51771	166527	0.21	0.17	0.31	0.31	0.62	0.8866	0.1706	0.8522	1.9458	125	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	921	464	171	359	808	3000	537	350	532	560	201	1681	208	1990	362	1081	105	926	1553	329	1311	783	2788	1182	1149	1266	106	368	312	604	2116	324	3116	54	331	3548	1024	713	1271	2179	742	1033	513	2199	115	565	880	90	267	153	1439	2138	107	106	47	344	46	895	1434	333	352	52	82	894