GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_004799645.1	NZ_CP031305	NZ_CP031305.1	Natronorubrum bangense strain JCM 10635 chromosome; complete genome.	597026	591023	945760	945377	3079186	0.19	0.19	0.31	0.31	0.61	0.9366	0.0053	0.9948	1.9621	1648	1455	3103	533999	456254	822367	819504	2632124	0.21	0.18	0.31	0.31	0.62	0.8863	0.1828	0.8425	1.9454	1706	1601	1415	3016	525417	448882	810630	807089	2592018	0.21	0.18	0.31	0.31	0.62	0.8863	0.1832	0.8423	1.9453	1674	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	158	114	260	271	803	0.19	0.14	0.32	0.34	0	0.66	0.8883	0.1831	0.8396	1.9143	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	32	18	50	690	761	1108	1213	3772	0.18	0.2	0.29	0.32	0	0.62	0.874	0.1871	0.8383	1.9456	3	6	9	3354	2496	3444	4251	13545	0.22	0.18	0.29	0.31	0	0.6	0.9015	0.1958	0.8258	1.9584	15424	7908	2551	5195	15430	51296	9770	6294	7279	9514	2810	26781	3280	26237	4799	17319	2293	13429	21657	5958	20719	12148	42092	18985	19017	20007	1643	4908	5035	8993	33350	6039	49261	1052	6560	54836	14769	11617	17960	34359	11319	17969	8014	35376	1830	9355	13457	1600	4769	3165	18639	30991	1507	2362	849	7127	606	13015	17878	7021	4166	892	1518	12007
GCF_004799645.1	NZ_CP031306	NZ_CP031306.1	Natronorubrum bangense strain JCM 10635 plasmid unnamed1; complete sequence.	166633	169658	245646	245730	827667	0.2	0.2	0.3	0.3	0.59	0.9325	0.0092	0.9909	1.9745	360	403	763	142386	121325	201165	204364	669240	0.22	0.18	0.3	0.3	0.6	0.8908	0.1909	0.8365	1.9553	605	344	385	729	137576	117129	194822	197735	647262	0.22	0.18	0.3	0.3	0.6	0.8907	0.1906	0.8367	1.9551	530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	57	45	99	111	312	0.18	0.14	0.32	0.36	0	0.67	0.8792	0.1748	0.8407	1.9069	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	6	10	143	158	209	223	733	0.19	0.21	0.29	0.31	0	0.6	0.8839	0.134	0.881	1.961	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3678	2129	883	1680	4129	12033	2698	1925	1986	2525	1001	7312	1039	6371	1521	4579	822	3655	5351	1608	4690	3401	10018	5425	4609	4871	565	1430	1431	2821	7988	1931	11034	455	2019	12939	3528	2555	4508	7211	2897	3886	2095	7666	476	2733	3450	482	1169	934	4431	7184	406	726	280	2017	148	3168	4292	1863	1438	176	405	3078
GCF_004799645.1	NZ_CP031307	NZ_CP031307.1	Natronorubrum bangense strain JCM 10635 plasmid unnamed2; complete sequence.	44973	42650	62711	63571	213905	0.21	0.2	0.29	0.3	0.59	0.934	0.0333	0.9674	1.9761	95	93	188	35333	30811	50793	50484	167421	0.22	0.19	0.3	0.3	0.6	0.8932	0.1715	0.851	1.9601	124	95	92	187	35240	30718	50664	50361	166983	0.22	0.19	0.3	0.3	0.6	0.8932	0.1723	0.8503	1.96	124	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	979	463	190	421	1122	2992	740	514	481	577	246	1843	301	1698	413	1104	196	855	1418	447	1234	851	2635	1472	1238	1208	139	351	388	704	2069	518	2869	78	495	3187	987	630	1209	1907	682	900	602	1864	105	752	873	102	302	270	1287	1873	116	182	68	613	35	827	1195	477	330	60	92	885
GCF_004799645.1	NZ_CP031308	NZ_CP031308.1	Natronorubrum bangense strain JCM 10635 plasmid unnamed3; complete sequence.	33188	32034	40507	40460	146189	0.23	0.22	0.28	0.28	0.55	0.9447	0.0183	0.982	1.9915	70	42	112	28430	22718	32090	33453	116691	0.25	0.19	0.27	0.29	0.56	0.9024	0.1976	0.8302	1.9746	78	65	38	103	26350	21085	30127	31344	108906	0.25	0.19	0.28	0.29	0.56	0.9018	0.1985	0.8294	1.9738	54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	17	17	21	20	75	0.23	0.23	0.28	0.27	0	0.55	0.8929	0.0244	0.9762	1.9935	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	525	626	252	342	747	1988	532	420	310	516	372	1482	306	888	324	744	222	559	987	257	616	522	1480	1243	966	638	173	277	389	504	1185	458	1237	139	430	1894	615	367	796	755	403	561	447	696	161	479	547	136	219	242	594	917	118	215	93	414	22	716	640	432	463	34	47	623
GCF_004799645.1	NZ_CP031309	NZ_CP031309.1	Natronorubrum bangense strain JCM 10635 plasmid unnamed4; complete sequence.	24819	24062	33638	32946	115465	0.21	0.21	0.29	0.29	0.58	0.9427	0.0259	0.9745	1.9829	57	41	98	20115	17180	26669	27639	91603	0.22	0.19	0.29	0.3	0.59	0.8965	0.1726	0.8474	1.9656	56	51	36	87	17477	15222	23840	24299	80838	0.22	0.19	0.29	0.3	0.59	0.8966	0.1715	0.8485	1.9667	56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	26	32	38	48	144	0.18	0.22	0.26	0.33	0	0.6	0.8987	0.2197	0.8021	1.9636	4	4	8	2284	1707	2380	2903	9274	0.21	0.18	0.3	0.31	0	0.61	0.8934	0.1663	0.8513	1.954	560	286	110	207	518	1501	328	257	251	284	129	880	146	825	189	625	112	406	701	217	616	413	1307	669	617	533	73	166	195	355	1119	250	1370	47	254	1418	415	277	570	775	336	392	315	961	70	373	457	65	152	131	593	883	83	82	33	267	22	358	547	236	179	13	52	375