GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_900108095.1	NZ_FNWL01000005	NZ_FNWL01000005.1	Natronorubrum sediminis strain CGMCC 1.8981; whole genome shotgun sequence.	48406	48795	73865	73989	0	245055	0.2	0.2	0.3	0.3	0.6	0.9337	0.0048	0.9952	1.969	105	107	212	40940	35009	62285	60894	199128	0.21	0.18	0.31	0.3	0.61	0.8857	0.1884	0.8385	1.9488	111	105	107	212	40940	35009	62285	60894	199128	0.21	0.18	0.31	0.3	0.61	0.8857	0.1884	0.8385	1.9488	111	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1049	590	304	293	994	3499	629	617	723	621	311	2281	257	2330	438	1248	210	1085	1854	359	1162	1005	3626	1320	1220	1396	185	544	291	980	2492	365	3678	139	316	4213	1252	853	1609	2395	863	1208	556	2370	171	747	996	162	299	144	1701	2623	179	164	88	572	42	850	1539	402	503	81	89	1294
GCF_900108095.1	NZ_FNWL01000006	NZ_FNWL01000006.1	Natronorubrum sediminis strain CGMCC 1.8981; whole genome shotgun sequence.	34394	33217	45903	46198	0	159712	0.22	0.21	0.29	0.29	0.58	0.9396	0.0206	0.9797	1.9829	73	56	129	26259	22543	35378	36881	121061	0.22	0.19	0.29	0.3	0.59	0.8953	0.1797	0.8422	1.9629	36	68	54	122	25426	21800	34269	35724	117219	0.22	0.19	0.29	0.31	0.59	0.8957	0.1811	0.8412	1.9624	36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	794	413	263	246	639	1942	393	432	370	532	225	1508	173	1252	243	811	145	633	1112	289	688	692	1740	951	685	878	186	358	221	724	1488	308	1828	125	242	2200	711	469	963	1131	422	608	372	1123	129	548	657	101	182	116	813	1541	98	115	71	275	21	567	925	298	341	37	63	647
GCF_900108095.1	NZ_FNWL01000004	NZ_FNWL01000004.1	Natronorubrum sediminis strain CGMCC 1.8981; whole genome shotgun sequence.	52704	51645	86533	85373	0	276255	0.19	0.19	0.31	0.31	0.62	0.9295	0.0169	0.9833	1.9564	142	110	252	47236	38406	74568	73207	233417	0.2	0.17	0.32	0.31	0.63	0.8825	0.1876	0.8379	1.9393	58	140	104	244	45613	37159	72640	71001	226413	0.2	0.17	0.32	0.31	0.63	0.8819	0.1865	0.8389	1.9387	58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	2	2	27	34	37	47	145	0.19	0.23	0.26	0.32	0	0.58	0.8867	0.2333	0.7911	1.9708	0	3	3	1106	834	1135	1441	4516	0.22	0.18	0.28	0.31	0	0.59	0.913	0.2152	0.8078	1.9612	1371	703	207	266	978	4643	608	536	780	802	233	2637	217	2651	449	1424	194	1093	2121	376	1369	895	4218	1212	1416	1812	125	560	237	1039	2804	290	4428	92	273	5390	1434	1109	1790	3095	942	1730	541	3172	184	651	1091	146	362	88	1758	3052	160	130	60	484	46	899	1608	446	492	81	117	1354
GCF_900108095.1	NZ_FNWL01000003	NZ_FNWL01000003.1	Natronorubrum sediminis strain CGMCC 1.8981; whole genome shotgun sequence.	58395	61839	94374	94333	60	309001	0.19	0.2	0.31	0.31	0.61	0.9323	0.0289	0.9719	1.9639	143	163	306	54255	43036	80079	80673	258043	0.21	0.17	0.31	0.31	0.62	0.8838	0.2029	0.8264	1.943	122	133	155	288	52403	41554	77840	78121	249918	0.21	0.17	0.31	0.31	0.62	0.8831	0.2032	0.8264	1.9429	118	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6	6	12	154	179	259	290	882	0.17	0.2	0.29	0.33	0	0.62	0.892	0.2054	0.8242	1.9407	3	0	3	1106	834	1135	1441	4516	0.22	0.18	0.28	0.31	0	0.59	0.913	0.2152	0.8078	1.9612	1538	883	331	353	1228	5189	671	679	868	899	365	3109	271	2789	482	1781	206	1217	2232	422	1406	1191	4362	1577	1644	1873	166	614	301	1149	2935	412	4572	113	335	5785	1615	1180	1889	3033	1001	1822	673	3214	211	850	1146	160	403	167	1900	3406	219	161	100	554	51	975	1784	523	579	106	131	1505
GCF_900108095.1	NZ_FNWL01000002	NZ_FNWL01000002.1	Natronorubrum sediminis strain CGMCC 1.8981; whole genome shotgun sequence.	256182	250960	395128	398320	150	1300740	0.2	0.19	0.3	0.31	0.61	0.9382	0.0143	0.9858	1.9647	616	650	1266	227296	188486	342802	339926	1098510	0.21	0.17	0.31	0.31	0.62	0.8839	0.1977	0.8301	1.945	626	597	638	1235	224579	186224	339080	335934	1085817	0.21	0.17	0.31	0.31	0.62	0.8838	0.199	0.8291	1.9448	599	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12	8	20	298	303	463	489	1553	0.19	0.19	0.3	0.32	0	0.61	0.8715	0.1415	0.8739	1.9474	3	0	3	1106	834	1135	1441	4516	0.22	0.18	0.28	0.31	0	0.59	0.913	0.2152	0.8078	1.9612	6461	3603	1437	1738	5512	21069	3187	3105	3851	4005	1574	13008	1247	12015	2319	7161	1105	5556	10046	1868	6040	5281	19327	6994	6685	8134	753	2879	1446	4967	13258	1855	20376	535	1639	24307	7102	5096	8367	13451	4611	7412	2914	13932	962	3781	5312	748	1847	743	8211	14208	937	820	454	2524	188	4189	7663	2341	2698	447	600	6038
GCF_900108095.1	NZ_FNWL01000001	NZ_FNWL01000001.1	Natronorubrum sediminis strain CGMCC 1.8981; whole genome shotgun sequence.	287718	286924	458506	458634	0	1491782	0.19	0.19	0.31	0.31	0.61	0.9359	0.0015	0.9985	1.9616	710	742	1452	261774	217147	400942	398299	1278162	0.21	0.17	0.31	0.31	0.62	0.8833	0.1936	0.8331	1.9435	686	699	722	1421	257742	213802	395645	392613	1259802	0.21	0.17	0.31	0.31	0.62	0.8832	0.1939	0.833	1.9434	656	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	2	162	120	279	302	863	0.18	0.14	0.32	0.36	0	0.68	0.8891	0.1846	0.8355	1.8981	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	10	15	205	226	331	370	1132	0.18	0.2	0.29	0.33	0	0.62	0.8701	0.212	0.8186	1.9425	0	3	3	1106	834	1135	1441	4516	0.22	0.18	0.28	0.31	0	0.59	0.913	0.2152	0.8078	1.9612	7352	4015	1531	1870	6078	24841	3516	3438	4429	4629	1729	15319	1431	14373	2613	7933	1185	6517	11744	2165	6984	5953	23024	7847	7649	9495	878	3216	1572	5687	15232	2070	24116	635	1828	29057	7828	6000	9771	15855	5300	8678	3092	16568	1031	4038	6241	891	2018	772	9830	16851	1018	923	525	2708	226	4850	9074	2675	2929	525	670	7096