Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_024204665.1 | NZ_CP100355 | NZ_CP100355.1 | Natronosalvus rutilus strain WLHS1 chromosome; complete genome. | 684504 | 687879 | 1207665 | 1206946 | 0 | 3786994 | 0.18 | 0.18 | 0.32 | 0.32 | 0 | 0.64 | 0.9275 | 0.0028 | 0.9972 | 1.9447 | 1919 | 1746 | 3665 | 608370 | 516183 | 1053978 | 1032413 | 0 | 3210944 | 0.19 | 0.16 | 0.32 | 0.32 | 0 | 0.64 | 0.8786 | 0.1878 | 0.8384 | 1.9235 | 2158 | 1866 | 1684 | 3550 | 596808 | 505722 | 1035670 | 1013813 | 0 | 3152013 | 0.19 | 0.16 | 0.32 | 0.32 | 0 | 0.64 | 0.8785 | 0.1884 | 0.838 | 1.923 | 1987 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2 | 0 | 2 | 132 | 90 | 245 | 270 | 0 | 737 | 0.18 | 0.12 | 0.33 | 0.37 | 0 | 0.7 | 0.8792 | 0.2371 | 0.795 | 1.8736 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 19 | 29 | 48 | 665 | 737 | 1070 | 1174 | 0 | 3646 | 0.18 | 0.2 | 0.29 | 0.32 | 0 | 0.61 | 0.8735 | 0.1793 | 0.8425 | 1.9476 | 0 | 3 | 3 | 6 | 1895 | 1349 | 2032 | 2403 | 0 | 7679 | 0.21 | 0.15 | 0.32 | 0.32 | 0 | 0.64 | 0.8788 | 0.2669 | 0.7674 | 1.9158 | 0 | 17434 | 12114 | 3941 | 4063 | 9237 | 65779 | 7759 | 6344 | 11498 | 12040 | 3589 | 28063 | 2752 | 32233 | 4545 | 21831 | 2371 | 18966 | 30042 | 4270 | 25581 | 11601 | 56088 | 14332 | 21914 | 28941 | 2006 | 5215 | 3083 | 12012 | 36144 | 4460 | 61837 | 1476 | 3432 | 72637 | 19971 | 17187 | 25377 | 49281 | 14519 | 25497 | 6163 | 44986 | 3836 | 8146 | 19872 | 1758 | 4030 | 1787 | 24459 | 43002 | 1300 | 2363 | 2227 | 4824 | 778 | 18729 | 24012 | 5906 | 3916 | 666 | 2106 | 14343 |
GCF_024204665.1 | NZ_CP100356 | NZ_CP100356.1 | Natronosalvus rutilus strain WLHS1 plasmid unnamed1; complete sequence. | 73352 | 74942 | 95888 | 95783 | 0 | 339965 | 0.22 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9485 | 0.0113 | 0.9888 | 1.9882 | 121 | 153 | 274 | 59455 | 50179 | 72959 | 75704 | 0 | 258297 | 0.24 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.9018 | 0.1743 | 0.8466 | 1.9719 | 165 | 121 | 150 | 271 | 59023 | 49853 | 72425 | 75148 | 0 | 256449 | 0.23 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.9018 | 0.1739 | 0.847 | 1.972 | 165 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1518 | 1089 | 684 | 742 | 1586 | 4252 | 1031 | 1139 | 896 | 1041 | 776 | 3266 | 659 | 2334 | 685 | 1971 | 450 | 1514 | 2283 | 657 | 1489 | 1423 | 3614 | 2303 | 1775 | 1718 | 448 | 674 | 673 | 1426 | 2863 | 993 | 3631 | 417 | 883 | 4431 | 1392 | 942 | 1919 | 2158 | 1010 | 1207 | 932 | 2308 | 270 | 1268 | 1547 | 306 | 391 | 464 | 1566 | 2534 | 299 | 458 | 239 | 868 | 58 | 1244 | 1537 | 860 | 879 | 75 | 138 | 1280 |
GCF_024204665.1 | NZ_CP100357 | NZ_CP100357.1 | Natronosalvus rutilus strain WLHS1 plasmid unnamed2; complete sequence. | 27027 | 28449 | 35903 | 35355 | 0 | 126734 | 0.21 | 0.22 | 0.28 | 0.28 | 0 | 0.56 | 0.9457 | 0.0333 | 0.9674 | 1.9886 | 43 | 80 | 123 | 20299 | 17301 | 25764 | 26114 | 0 | 89478 | 0.23 | 0.19 | 0.29 | 0.29 | 0 | 0.58 | 0.8948 | 0.183 | 0.8405 | 1.9671 | 50 | 41 | 80 | 121 | 19631 | 16691 | 24930 | 25214 | 0 | 86466 | 0.23 | 0.19 | 0.29 | 0.29 | 0 | 0.58 | 0.8946 | 0.1837 | 0.84 | 1.9668 | 50 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 506 | 366 | 199 | 276 | 532 | 1446 | 428 | 387 | 280 | 375 | 262 | 990 | 238 | 732 | 266 | 656 | 146 | 482 | 731 | 192 | 576 | 439 | 1264 | 878 | 690 | 591 | 127 | 216 | 240 | 405 | 964 | 341 | 1145 | 107 | 332 | 1387 | 416 | 352 | 612 | 845 | 389 | 492 | 303 | 728 | 96 | 406 | 489 | 99 | 136 | 160 | 523 | 816 | 81 | 153 | 73 | 293 | 32 | 485 | 534 | 270 | 297 | 34 | 55 | 461 |
GCF_024204665.1 | NZ_CP100358 | NZ_CP100358.1 | Natronosalvus rutilus strain WLHS1 plasmid unnamed3; complete sequence. | 9264 | 11894 | 19365 | 17945 | 0 | 58468 | 0.16 | 0.2 | 0.33 | 0.31 | 0 | 0.64 | 0.9103 | 0.1624 | 0.8528 | 1.9395 | 14 | 83 | 97 | 10979 | 7577 | 16366 | 17759 | 0 | 52681 | 0.21 | 0.14 | 0.31 | 0.33 | 0 | 0.64 | 0.8764 | 0.2691 | 0.7774 | 1.9189 | 229 | 14 | 82 | 96 | 10961 | 7563 | 16344 | 17737 | 0 | 52605 | 0.21 | 0.14 | 0.31 | 0.33 | 0 | 0.65 | 0.8761 | 0.2706 | 0.7762 | 1.9183 | 229 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 1 | 1 | 18 | 14 | 22 | 22 | 0 | 76 | 0.24 | 0.18 | 0.29 | 0.29 | 0 | 0.58 | 0.9044 | 0.125 | 0.8889 | 1.9772 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 323 | 390 | 57 | 62 | 133 | 1303 | 155 | 53 | 209 | 277 | 35 | 349 | 73 | 457 | 80 | 532 | 30 | 376 | 470 | 49 | 496 | 187 | 603 | 324 | 481 | 565 | 44 | 25 | 27 | 145 | 624 | 68 | 722 | 31 | 50 | 1303 | 386 | 224 | 470 | 691 | 290 | 276 | 124 | 756 | 133 | 72 | 487 | 13 | 49 | 41 | 280 | 603 | 7 | 44 | 53 | 70 | 12 | 527 | 449 | 72 | 83 | 25 | 59 | 131 |