Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_030505615.1 | NZ_CP129992 | NZ_CP129992.1 | Salinibaculum sp. KK48 chromosome; complete genome. | 551935 | 553923 | 912604 | 912057 | 0 | 2930519 | 0.19 | 0.19 | 0.31 | 0.31 | 0 | 0.62 | 0.933 | 0.0021 | 0.9979 | 1.9562 | 1475 | 1543 | 3018 | 525943 | 432285 | 825726 | 813249 | 0 | 2597203 | 0.2 | 0.17 | 0.31 | 0.31 | 0 | 0.63 | 0.8852 | 0.2041 | 0.826 | 1.9347 | 1927 | 1426 | 1492 | 2918 | 515450 | 422984 | 810174 | 796928 | 0 | 2545536 | 0.2 | 0.17 | 0.32 | 0.31 | 0 | 0.63 | 0.8852 | 0.2053 | 0.8251 | 1.9344 | 1885 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 2 | 2 | 123 | 70 | 218 | 233 | 0 | 644 | 0.19 | 0.11 | 0.34 | 0.36 | 0 | 0.7 | 0.8671 | 0.3043 | 0.7573 | 1.8623 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23 | 26 | 49 | 658 | 709 | 1106 | 1218 | 0 | 3691 | 0.18 | 0.19 | 0.3 | 0.33 | 0 | 0.63 | 0.8709 | 0.1885 | 0.8398 | 1.9341 | 0 | 3 | 3 | 6 | 2208 | 1640 | 2331 | 2861 | 0 | 9040 | 0.23 | 0.17 | 0.28 | 0.32 | 0 | 0.6 | 0.9042 | 0.2172 | 0.8061 | 1.9597 | 0 | 14944 | 9803 | 2932 | 5105 | 14674 | 46685 | 7485 | 7614 | 8443 | 9379 | 3249 | 26857 | 3001 | 22487 | 5593 | 17474 | 2841 | 15523 | 21650 | 5990 | 23929 | 11748 | 39149 | 9769 | 21116 | 22094 | 1815 | 4702 | 4157 | 8326 | 26221 | 4829 | 50707 | 2414 | 7042 | 62781 | 15179 | 12473 | 18962 | 36090 | 11231 | 20340 | 7775 | 33387 | 2065 | 6050 | 15159 | 1741 | 4173 | 1985 | 15618 | 29188 | 1124 | 1861 | 1303 | 5396 | 691 | 15789 | 18104 | 5908 | 4697 | 689 | 1549 | 7455 |
GCF_030505615.1 | NZ_CP129993 | NZ_CP129993.1 | Salinibaculum sp. KK48 plasmid unnamed1; complete sequence. | 11950 | 11713 | 14432 | 14507 | 0 | 52602 | 0.23 | 0.22 | 0.27 | 0.28 | 0 | 0.55 | 0.9448 | 0.0126 | 0.9875 | 1.9927 | 18 | 21 | 39 | 8808 | 7300 | 9757 | 10060 | 0 | 35925 | 0.25 | 0.2 | 0.27 | 0.28 | 0 | 0.56 | 0.9019 | 0.1965 | 0.829 | 1.9715 | 30 | 18 | 21 | 39 | 8808 | 7300 | 9757 | 10060 | 0 | 35925 | 0.25 | 0.2 | 0.27 | 0.28 | 0 | 0.56 | 0.9019 | 0.1965 | 0.829 | 1.9715 | 30 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 139 | 194 | 89 | 187 | 227 | 548 | 219 | 190 | 116 | 129 | 174 | 400 | 126 | 318 | 163 | 304 | 123 | 201 | 256 | 112 | 219 | 245 | 428 | 391 | 291 | 243 | 65 | 113 | 93 | 174 | 317 | 156 | 444 | 54 | 187 | 609 | 155 | 115 | 263 | 237 | 185 | 179 | 184 | 300 | 19 | 228 | 177 | 52 | 36 | 72 | 196 | 266 | 35 | 71 | 35 | 144 | 4 | 162 | 174 | 138 | 149 | 10 | 25 | 120 |
GCF_030505615.1 | NZ_CP129994 | NZ_CP129994.1 | Salinibaculum sp. KK48 plasmid unnamed2; complete sequence. | 119916 | 144171 | 144574 | 151877 | 0 | 560538 | 0.21 | 0.26 | 0.26 | 0.27 | 0 | 0.53 | 0.9503 | 0.1165 | 0.8918 | 1.9945 | 127 | 410 | 537 | 120289 | 89961 | 117573 | 113460 | 0 | 441283 | 0.27 | 0.2 | 0.27 | 0.26 | 0 | 0.53 | 0.9018 | 0.255 | 0.7845 | 1.9756 | 331 | 114 | 400 | 514 | 119843 | 89484 | 116901 | 112729 | 0 | 438957 | 0.27 | 0.21 | 0.27 | 0.25 | 0 | 0.52 | 0.9027 | 0.2599 | 0.7807 | 1.977 | 331 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 12 | 9 | 21 | 278 | 325 | 486 | 525 | 0 | 1614 | 0.17 | 0.2 | 0.3 | 0.32 | 0 | 0.62 | 0.8749 | 0.1653 | 0.8545 | 1.9397 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2374 | 1526 | 1083 | 2727 | 3996 | 4626 | 2998 | 2520 | 1176 | 1679 | 2163 | 8072 | 1882 | 2918 | 1968 | 3824 | 1407 | 2962 | 3649 | 1082 | 1653 | 2533 | 4776 | 5286 | 2360 | 2917 | 758 | 1054 | 1318 | 1948 | 4297 | 2169 | 3521 | 549 | 3458 | 7476 | 2537 | 1075 | 3191 | 2251 | 1554 | 2069 | 3121 | 2280 | 699 | 2566 | 2541 | 381 | 611 | 1237 | 1375 | 2786 | 671 | 1177 | 164 | 2607 | 86 | 1703 | 2234 | 1730 | 2874 | 191 | 237 | 1666 |