Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_024228675.1 | NZ_CP100461 | NZ_CP100461.1 | Salinigranum marinum strain ZS-10 chromosome; complete genome. | 663989 | 662428 | 1335952 | 1340383 | 1 | 4002753 | 0.17 | 0.17 | 0.33 | 0.33 | 0 | 0.67 | 0.9277 | 0.0028 | 0.9972 | 1.9163 | 1970 | 1999 | 3969 | 580967 | 516188 | 1152675 | 1145699 | 0 | 3395529 | 0.17 | 0.15 | 0.34 | 0.34 | 0 | 0.67 | 0.8685 | 0.1869 | 0.8401 | 1.8936 | 2282 | 1918 | 1934 | 3852 | 569795 | 506279 | 1134151 | 1126315 | 0 | 3336540 | 0.17 | 0.15 | 0.34 | 0.34 | 0 | 0.67 | 0.8681 | 0.187 | 0.8401 | 1.8927 | 2211 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 2 | 2 | 130 | 88 | 256 | 281 | 0 | 755 | 0.17 | 0.12 | 0.34 | 0.37 | 0 | 0.71 | 0.8699 | 0.2315 | 0.8031 | 1.8564 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23 | 30 | 53 | 707 | 790 | 1192 | 1324 | 0 | 4013 | 0.18 | 0.2 | 0.3 | 0.33 | 0 | 0.63 | 0.8768 | 0.1694 | 0.851 | 1.9393 | 0 | 3 | 3 | 6 | 2241 | 1569 | 2387 | 2812 | 0 | 9009 | 0.24 | 0.16 | 0.29 | 0.31 | 0 | 0.6 | 0.9015 | 0.2654 | 0.773 | 1.9536 | 0 | 17716 | 13813 | 2425 | 2932 | 7871 | 64290 | 4686 | 2316 | 11461 | 12706 | 1638 | 22112 | 2516 | 37770 | 3359 | 22185 | 1850 | 26096 | 34394 | 2876 | 26026 | 10831 | 63541 | 9466 | 21945 | 28732 | 1342 | 4662 | 2354 | 9618 | 35756 | 3057 | 75005 | 1125 | 3809 | 81025 | 20908 | 20052 | 26431 | 51638 | 13776 | 30679 | 5158 | 49772 | 3962 | 4852 | 27353 | 2122 | 4088 | 1614 | 28119 | 60768 | 938 | 1651 | 2338 | 3539 | 645 | 28833 | 27835 | 6363 | 3111 | 539 | 2678 | 9109 |
GCF_024228675.1 | NZ_CP100462 | NZ_CP100462.1 | Salinigranum marinum strain ZS-10 plasmid unnamed1; complete sequence. | 79860 | 78129 | 139656 | 139384 | 0 | 437029 | 0.18 | 0.18 | 0.32 | 0.32 | 0 | 0.64 | 0.9234 | 0.0119 | 0.9882 | 1.9439 | 187 | 196 | 383 | 62838 | 56425 | 111677 | 111548 | 0 | 342488 | 0.19 | 0.17 | 0.32 | 0.32 | 0 | 0.64 | 0.8808 | 0.1719 | 0.8509 | 1.9247 | 258 | 183 | 188 | 371 | 61724 | 55286 | 109908 | 109778 | 0 | 336696 | 0.19 | 0.17 | 0.32 | 0.32 | 0 | 0.64 | 0.8804 | 0.1726 | 0.8503 | 1.9237 | 259 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 0 | 1 | 16 | 15 | 23 | 30 | 0 | 84 | 0.19 | 0.18 | 0.27 | 0.36 | 0 | 0.63 | 0.8809 | 0.1643 | 0.8521 | 1.9417 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1598 | 1276 | 398 | 540 | 1228 | 5846 | 936 | 563 | 1120 | 1301 | 337 | 2578 | 411 | 3870 | 568 | 2146 | 274 | 2684 | 3208 | 428 | 2732 | 1277 | 5967 | 1611 | 2337 | 2994 | 263 | 682 | 467 | 1238 | 3715 | 554 | 6784 | 203 | 678 | 7212 | 1966 | 1727 | 2493 | 4463 | 1590 | 2514 | 581 | 4153 | 328 | 850 | 2587 | 237 | 428 | 327 | 2585 | 5436 | 134 | 274 | 299 | 630 | 65 | 2742 | 2843 | 853 | 539 | 66 | 246 | 1251 |
GCF_024228675.1 | NZ_CP100463 | NZ_CP100463.1 | Salinigranum marinum strain ZS-10 plasmid unnamed2; complete sequence. | 58209 | 59344 | 102553 | 101153 | 0 | 321259 | 0.18 | 0.18 | 0.32 | 0.31 | 0 | 0.63 | 0.9306 | 0.0165 | 0.9836 | 1.9474 | 117 | 160 | 277 | 42747 | 38856 | 76066 | 76475 | 0 | 234144 | 0.19 | 0.17 | 0.32 | 0.33 | 0 | 0.64 | 0.8789 | 0.1972 | 0.8315 | 1.9199 | 166 | 116 | 155 | 271 | 42105 | 38210 | 75155 | 75509 | 0 | 230979 | 0.19 | 0.17 | 0.32 | 0.33 | 0 | 0.64 | 0.8788 | 0.1972 | 0.8314 | 1.9197 | 161 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1244 | 893 | 216 | 339 | 760 | 4116 | 507 | 314 | 778 | 1000 | 194 | 1720 | 256 | 2596 | 355 | 1636 | 163 | 1895 | 2385 | 299 | 2119 | 840 | 4176 | 951 | 1711 | 1914 | 151 | 462 | 302 | 766 | 2645 | 396 | 4671 | 125 | 415 | 4687 | 1508 | 1165 | 1864 | 3031 | 1067 | 1599 | 436 | 2855 | 252 | 504 | 1951 | 176 | 286 | 199 | 1748 | 3615 | 96 | 171 | 194 | 316 | 46 | 2011 | 1943 | 531 | 395 | 39 | 185 | 812 |
GCF_024228675.1 | NZ_CP100464 | NZ_CP100464.1 | Salinigranum marinum strain ZS-10 plasmid unnamed3; complete sequence. | 31122 | 30827 | 42209 | 41208 | 0 | 145366 | 0.21 | 0.21 | 0.29 | 0.28 | 0 | 0.57 | 0.9416 | 0.0168 | 0.9834 | 1.9841 | 46 | 63 | 109 | 28120 | 23148 | 35812 | 36175 | 0 | 123255 | 0.23 | 0.19 | 0.28 | 0.29 | 0 | 0.58 | 0.9002 | 0.1672 | 0.8539 | 1.9684 | 63 | 46 | 61 | 107 | 27739 | 22824 | 35278 | 35638 | 0 | 121479 | 0.23 | 0.19 | 0.28 | 0.29 | 0 | 0.57 | 0.9 | 0.1683 | 0.8529 | 1.9684 | 56 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 552 | 659 | 265 | 395 | 670 | 2147 | 600 | 417 | 405 | 497 | 334 | 1384 | 338 | 996 | 391 | 835 | 254 | 684 | 1146 | 221 | 833 | 633 | 1734 | 1125 | 957 | 851 | 230 | 278 | 316 | 582 | 1184 | 425 | 1452 | 133 | 462 | 2361 | 688 | 476 | 970 | 983 | 492 | 656 | 405 | 792 | 185 | 460 | 690 | 148 | 235 | 271 | 795 | 1191 | 137 | 241 | 135 | 436 | 19 | 879 | 774 | 471 | 434 | 37 | 51 | 696 |