GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_002906575.1	NZ_CP026309	NZ_CP026309.1	Salinigranum rubrum strain GX10 chromosome; complete genome.	699270	708554	1422450	1420289	4250563	0.16	0.17	0.33	0.33	0.67	0.9243	0.0074	0.9927	1.9161	1990	2137	4127	590792	521497	1172502	1150309	3435100	0.17	0.15	0.34	0.33	0.67	0.8677	0.196	0.8327	1.8962	3688	1926	2080	4006	578351	510037	1148384	1126336	3363108	0.17	0.15	0.34	0.33	0.67	0.8674	0.1962	0.8326	1.8957	3395	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	128	85	233	268	714	0.18	0.12	0.33	0.38	0	0.7	0.8618	0.2609	0.7804	1.8659	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	23	25	48	640	716	1075	1195	3626	0.18	0.2	0.3	0.33	0	0.63	0.8762	0.1888	0.8384	1.9372	3	3	6	2221	1563	2389	2835	9008	0.23	0.16	0.29	0.31	0	0.61	0.9043	0.2588	0.774	1.9518	18242	14343	2338	2640	7464	64924	5041	3127	13154	12691	1381	24674	2260	38158	3376	23138	2030	25519	35644	2198	25195	11941	67161	5352	22365	29996	1118	3924	2131	11370	32534	2979	78941	1716	3275	83934	21167	21126	26619	49960	14969	30443	4345	48914	3996	5115	25895	2723	4180	1288	28796	59364	962	1638	2572	2763	689	26017	27859	6316	2886	526	2791	10843
GCF_002906575.1	NZ_CP026310	NZ_CP026310.1	Salinigranum rubrum strain GX10 plasmid unnamed1; complete sequence.	49747	50859	68194	68203	237003	0.21	0.21	0.29	0.29	0.58	0.9415	0.0111	0.989	1.9834	92	104	196	34290	31198	46572	47801	159861	0.22	0.19	0.29	0.3	0.59	0.8955	0.1712	0.85	1.9629	245	88	96	184	33035	30138	44940	46156	154269	0.22	0.19	0.29	0.3	0.59	0.8956	0.1696	0.8513	1.9631	136	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	902	619	376	508	909	2480	693	572	533	609	356	1598	412	1511	439	1087	277	1078	1566	347	1117	901	2195	1097	1061	1181	271	460	382	813	1814	545	2338	245	533	2613	776	648	1043	1432	616	701	402	1321	130	751	1047	208	195	224	1037	1735	175	260	119	417	44	852	1081	489	464	36	104	678
GCF_002906575.1	NZ_CP026311	NZ_CP026311.1	Salinigranum rubrum strain GX10 plasmid unnamed2; complete sequence.	39281	41551	56428	60777	198037	0.2	0.21	0.28	0.31	0.59	0.9435	0.0652	0.9369	1.9747	84	116	200	33951	29276	48425	46292	157944	0.21	0.19	0.31	0.29	0.6	0.892	0.2206	0.8115	1.952	194	79	112	191	33020	28496	47107	45130	153753	0.21	0.19	0.31	0.29	0.6	0.8924	0.2206	0.8116	1.9516	125	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	15	16	23	21	75	0.2	0.21	0.31	0.28	0	0.59	0.8809	0.0777	0.9253	1.977	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	940	693	269	377	817	2333	634	448	604	718	374	1672	369	1418	453	1047	292	879	1525	254	906	780	2628	1203	1128	1280	176	355	391	730	1762	417	2244	158	463	2752	943	785	1202	1690	713	1026	471	1535	175	570	984	153	220	234	1013	1475	125	226	123	453	42	815	944	513	433	40	129	729
GCF_002906575.1	NZ_CP026312	NZ_CP026312.1	Salinigranum rubrum strain GX10 plasmid unnamed3; complete sequence.	23338	25580	35262	34697	118877	0.2	0.22	0.3	0.29	0.59	0.9379	0.0539	0.9482	1.9766	43	83	126	19931	17120	27316	28090	92457	0.22	0.19	0.29	0.3	0.59	0.8932	0.1894	0.8379	1.9573	107	42	79	121	19260	16698	26700	27396	90054	0.22	0.19	0.29	0.3	0.6	0.8937	0.1786	0.8458	1.9575	107	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	597	426	135	224	485	1502	359	257	295	450	216	954	171	785	258	647	125	568	888	175	680	470	1531	646	760	626	92	189	219	437	1084	248	1419	92	268	1516	509	365	680	849	422	523	283	842	104	343	651	104	135	135	541	1035	57	116	56	249	24	552	595	267	246	38	59	444
GCF_002906575.1	NZ_CP026313	NZ_CP026313.1	Salinigranum rubrum strain GX10 plasmid unnamed4; complete sequence.	27469	27072	37450	37451	129442	0.21	0.21	0.29	0.29	0.58	0.941	0.0073	0.9928	1.9821	41	62	103	22758	18429	29435	29833	100455	0.23	0.19	0.29	0.29	0.58	0.899	0.1919	0.8344	1.9641	173	37	58	95	21668	17349	27643	28185	94845	0.23	0.19	0.29	0.29	0.58	0.9	0.1898	0.8359	1.9648	89	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	531	518	204	267	509	1662	401	343	275	430	231	1105	208	819	245	742	166	493	864	213	604	428	1352	793	813	624	159	203	247	428	1098	277	1252	116	316	1893	520	387	772	815	346	527	377	888	128	377	563	111	132	183	615	1010	91	135	73	299	21	622	714	296	299	28	45	411
GCF_002906575.1	NZ_CP026314	NZ_CP026314.1	Salinigranum rubrum strain GX10 plasmid unnamed5; complete sequence.	7701	6705	12606	12184	39196	0.2	0.17	0.32	0.31	0.63	0.9169	0.0862	0.9186	1.9474	34	10	44	6747	5560	11315	11076	34698	0.19	0.17	0.32	0.32	0.64	0.8742	0.1866	0.8395	1.9319	96	34	10	44	6747	5560	11315	11076	34698	0.19	0.17	0.32	0.32	0.64	0.8742	0.1866	0.8395	1.9319	96	NA	NA	NA	NA	NA	NA	NA	0	0	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	166	147	31	63	154	660	102	49	96	166	35	226	64	437	63	282	49	223	296	31	172	138	650	134	262	236	20	40	44	113	340	76	684	28	90	891	192	155	274	357	128	346	71	409	37	76	189	36	54	36	392	553	11	22	19	61	3	223	273	98	88	14	26	164