GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_024054535.1	NZ_JAMXLV010000001	NZ_JAMXLV010000001.1	Thermococcus alcaliphilus strain AEDII12 k141_1; whole genome shotgun sequence.	102	89	65	94	350	0.29	0.25	0.19	0.27	0.45	0.9012	0.2505	0.782	1.9812	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_024054535.1	NZ_JAMXLV010000010	NZ_JAMXLV010000010.1	Thermococcus alcaliphilus strain AEDII12 k141_10; whole genome shotgun sequence.	234	203	144	203	784	0.3	0.26	0.18	0.26	0.44	0.8924	0.241	0.7884	1.9792	1	0	1	203	190	128	181	702	0.29	0.27	0.18	0.26	0	0.44	0.895	0.2046	0.8216	1.9798	0	1	0	1	203	190	128	181	702	0.29	0.27	0.18	0.26	0	0.44	0.895	0.2046	0.8216	1.9798	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	7	3	3	7	8	4	6	2	12	3	6	1	2	3	6	2	1	5	11	5	4	3	2	4	3	2	4	3	2	7	1	5	3	4	4	2	1	3	3	4	1	10	0	0	15	4	7	1	3	0	1	3	3	9	3	0	0	2	2	4	1	0	2
GCF_024054535.1	NZ_JAMXLV010000011	NZ_JAMXLV010000011.1	Thermococcus alcaliphilus strain AEDII12 k141_11; whole genome shotgun sequence.	13138	15075	10582	9803	48598	0.27	0.31	0.22	0.2	0.42	0.9357	0.1069	0.8989	1.9788	20	32	52	13914	10876	8017	10345	43152	0.32	0.25	0.18	0.24	0	0.43	0.9004	0.2853	0.7572	1.9572	42	20	29	49	12755	10046	7298	9438	39537	0.32	0.26	0.18	0.24	0	0.42	0.9011	0.2839	0.758	1.9599	42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	9	11	27	30	77	0.12	0.14	0.35	0.39	0	0.74	0.8549	0.1526	0.8591	1.823	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	289	424	231	190	354	534	231	333	104	137	208	604	163	101	130	302	106	207	220	361	146	153	274	321	134	157	186	199	277	413	234	397	140	560	235	232	115	121	277	175	193	20	517	156	27	443	211	298	31	81	41	116	215	132	218	180	14	14	83	10	153	13	22	16
GCF_024054535.1	NZ_JAMXLV010000012	NZ_JAMXLV010000012.1	Thermococcus alcaliphilus strain AEDII12 k141_12; whole genome shotgun sequence.	19135	20047	15903	13847	68932	0.28	0.29	0.23	0.2	0.43	0.9436	0.0924	0.9126	1.9847	24	52	76	19903	15497	11979	15701	63080	0.3	0.23	0.2	0.26	0	0.47	0.8951	0.31	0.741	1.9452	68	16	42	58	16547	12912	9698	12842	51999	0.33	0.24	0.18	0.25	0	0.43	0.8989	0.3372	0.7205	1.9561	11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	6	10	109	125	269	288	791	0.14	0.16	0.34	0.36	0	0.7	0.8633	0.1724	0.8462	1.8671	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	410	712	259	193	525	727	415	486	113	178	186	828	167	115	132	365	135	255	318	439	169	297	384	437	200	183	195	257	331	554	278	548	165	658	269	305	147	156	341	280	267	39	652	187	37	598	198	448	45	119	57	145	228	173	315	315	8	24	107	27	169	21	29	13
GCF_024054535.1	NZ_JAMXLV010000013	NZ_JAMXLV010000013.1	Thermococcus alcaliphilus strain AEDII12 k141_13; whole genome shotgun sequence.	6222	6494	4690	4010	21416	0.29	0.3	0.22	0.19	0.41	0.9343	0.0996	0.9066	1.9725	10	16	26	6488	4664	3129	4574	18855	0.34	0.24	0.17	0.25	0	0.42	0.8899	0.3841	0.6852	1.9398	33	9	15	24	6220	4475	2985	4389	18069	0.35	0.24	0.16	0.25	0	0.41	0.8914	0.3936	0.6787	1.9409	13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	14	12	29	23	78	0.18	0.15	0.37	0.29	0	0.67	0.8617	0.1923	0.8251	1.9105	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	122	249	101	68	157	258	105	160	30	57	113	347	54	46	67	106	49	84	76	165	51	64	104	174	44	60	59	105	130	177	110	182	61	238	95	114	46	55	82	73	52	11	330	65	14	190	106	154	21	53	16	48	117	62	109	97	2	5	31	7	62	10	12	11
GCF_024054535.1	NZ_JAMXLV010000014	NZ_JAMXLV010000014.1	Thermococcus alcaliphilus strain AEDII12 k141_141; whole genome shotgun sequence.	26914	24258	16964	20585	88721	0.3	0.27	0.19	0.23	0.42	0.939	0.1483	0.8627	1.979	59	26	85	25840	19989	14265	20087	80181	0.32	0.25	0.17	0.25	0	0.43	0.8993	0.3454	0.7152	1.9515	57	56	24	80	25417	19644	14025	19703	78789	0.33	0.25	0.17	0.25	0	0.42	0.9005	0.3484	0.7128	1.9529	35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	21	25	56	54	156	0.14	0.15	0.37	0.34	0	0.71	0.8133	0.5028	0.6154	1.816	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	583	1080	429	316	671	1197	558	741	144	335	381	1325	213	198	228	514	211	392	483	713	260	360	545	700	312	298	269	432	468	841	381	768	245	1020	333	472	212	251	528	358	345	53	1076	325	49	923	345	622	53	175	74	190	405	242	515	432	15	28	219	31	292	22	42	25
GCF_024054535.1	NZ_JAMXLV010000015	NZ_JAMXLV010000015.1	Thermococcus alcaliphilus strain AEDII12 k141_15; whole genome shotgun sequence.	3804	4330	2998	2762	13894	0.27	0.31	0.22	0.2	0.41	0.9295	0.1056	0.8999	1.9766	8	12	20	4041	3542	2250	3203	13036	0.31	0.26	0.17	0.25	0	0.42	0.8925	0.3059	0.7466	1.952	57	7	10	17	3404	2958	1960	2748	11070	0.31	0.26	0.18	0.25	0	0.43	0.8903	0.3177	0.737	1.9531	11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	84	176	36	48	63	164	58	98	30	52	56	137	44	28	34	70	35	55	69	108	46	62	81	102	31	30	45	60	93	97	75	111	53	134	48	74	34	33	75	46	48	10	139	39	12	130	66	75	14	23	17	22	64	37	77	40	7	10	26	10	30	2	8	9
GCF_024054535.1	NZ_JAMXLV010000016	NZ_JAMXLV010000016.1	Thermococcus alcaliphilus strain AEDII12 k141_16; whole genome shotgun sequence.	48370	47928	40314	35738	172350	0.28	0.28	0.23	0.21	0.44	0.9421	0.0648	0.9387	1.9889	72	114	186	45114	35966	27994	38127	147201	0.31	0.24	0.18	0.26	0	0.45	0.9	0.3263	0.7293	1.9616	229	66	103	169	41313	32986	25880	35016	135195	0.31	0.24	0.19	0.26	0	0.45	0.9001	0.325	0.7302	1.9628	164	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	13	12	30	32	87	0.15	0.14	0.34	0.37	0	0.71	0.887	0.0723	0.9303	1.8644	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1147	1972	663	487	1081	2200	915	1053	306	477	537	1982	388	388	361	914	333	769	836	1159	530	630	1129	1091	434	525	443	571	786	1346	783	1325	650	1632	567	861	477	483	937	842	645	110	1586	701	208	1519	709	920	177	321	187	463	561	356	894	690	28	57	325	71	334	56	85	52
GCF_024054535.1	NZ_JAMXLV010000017	NZ_JAMXLV010000017.1	Thermococcus alcaliphilus strain AEDII12 k141_17; whole genome shotgun sequence.	39	70	42	59	210	0.19	0.33	0.2	0.28	0.48	0.8987	0.4527	0.6345	1.9584	0	1	1	70	39	59	42	210	0.33	0.19	0.28	0.2	0	0.48	0.8479	0.4527	0.6345	1.9584	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_024054535.1	NZ_JAMXLV010000018	NZ_JAMXLV010000018.1	Thermococcus alcaliphilus strain AEDII12 k141_18; whole genome shotgun sequence.	54931	55655	42763	40340	193689	0.28	0.29	0.22	0.21	0.43	0.942	0.0357	0.9652	1.9851	95	110	205	55944	42728	32445	43660	174777	0.32	0.25	0.18	0.25	0	0.44	0.9008	0.3228	0.7322	1.9569	385	86	108	194	54290	41484	31458	42292	169524	0.32	0.25	0.18	0.25	0	0.43	0.9015	0.3269	0.7292	1.9586	314	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	50	38	96	129	313	0.16	0.12	0.31	0.41	0	0.72	0.8722	0.283	0.7521	1.842	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	0	3	35	36	79	83	233	0.15	0.15	0.34	0.36	0	0.7	0.8743	0.1192	0.8914	1.8817	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1283	2384	854	603	1366	2628	1026	1360	356	779	673	2718	458	398	419	1173	423	852	1093	1491	625	712	1310	1383	591	623	623	742	1143	1633	945	1692	706	2209	837	1037	549	569	1291	931	851	143	2376	778	163	1844	786	1348	187	384	146	484	750	463	1113	918	46	80	380	86	473	62	86	73
GCF_024054535.1	NZ_JAMXLV010000019	NZ_JAMXLV010000019.1	Thermococcus alcaliphilus strain AEDII12 k141_19; whole genome shotgun sequence.	43880	45943	32531	35327	157681	0.28	0.29	0.21	0.22	0.43	0.9412	0.0642	0.938	1.9852	94	74	168	45562	35118	26190	35994	142864	0.32	0.24	0.18	0.26	0	0.44	0.9009	0.3548	0.7081	1.9555	293	90	67	157	44195	33966	25436	34919	138516	0.32	0.24	0.18	0.26	0	0.44	0.9021	0.3538	0.7085	1.957	242	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	12	13	31	32	88	0.14	0.15	0.35	0.36	0	0.72	0.8479	0.0559	0.9459	1.8605	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1138	1995	736	490	1244	1996	915	1191	222	569	563	2094	419	308	379	976	309	661	869	1294	505	683	1004	1138	451	489	495	682	822	1527	787	1332	592	1777	701	837	462	429	944	767	658	98	1724	615	94	1524	630	1187	88	291	116	411	673	378	950	843	23	56	321	51	456	41	93	59
GCF_024054535.1	NZ_JAMXLV010000002	NZ_JAMXLV010000002.1	Thermococcus alcaliphilus strain AEDII12 k141_2; whole genome shotgun sequence.	111	120	87	77	395	0.28	0.3	0.22	0.19	0.42	0.9024	0.0999	0.905	1.9774	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_024054535.1	NZ_JAMXLV010000020	NZ_JAMXLV010000020.1	Thermococcus alcaliphilus strain AEDII12 k141_20; whole genome shotgun sequence.	92590	90035	71143	68598	322366	0.29	0.28	0.22	0.21	0.43	0.9472	0.0322	0.9683	1.987	166	180	346	90715	69705	54022	72015	286457	0.32	0.24	0.19	0.25	0	0.44	0.9008	0.3161	0.7362	1.9595	527	153	164	317	85320	65451	50816	68011	269598	0.32	0.24	0.18	0.25	0	0.44	0.9016	0.3248	0.7293	1.9612	468	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	5	7	89	82	191	192	554	0.16	0.14	0.35	0.35	0	0.7	0.8599	0.1442	0.8772	1.8767	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1984	3635	1406	978	2224	4176	1637	2256	617	1140	1130	4235	781	679	708	1869	644	1418	1721	2257	1051	1207	2201	2297	896	994	986	1156	1655	2746	1571	2600	1102	3447	1195	1710	787	1015	1891	1555	1384	234	3659	1244	261	2938	1252	2071	239	576	306	803	1143	812	1857	1414	65	113	635	152	770	94	158	129
GCF_024054535.1	NZ_JAMXLV010000021	NZ_JAMXLV010000021.1	Thermococcus alcaliphilus strain AEDII12 k141_21; whole genome shotgun sequence.	73310	71063	56732	52908	254013	0.29	0.28	0.22	0.21	0.43	0.9428	0.0504	0.951	1.986	113	179	292	73175	57196	42815	58541	231727	0.31	0.25	0.19	0.26	0	0.44	0.9001	0.3133	0.7382	1.958	481	94	165	259	68269	53050	39841	54396	215556	0.32	0.25	0.18	0.25	0	0.43	0.9015	0.3182	0.7338	1.9618	380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	4	9	111	110	250	249	720	0.15	0.15	0.35	0.34	0	0.69	0.8668	0.0977	0.909	1.886	1	1	2	40	30	84	90	244	0.16	0.12	0.34	0.37	0	0.71	0.8617	0.1773	0.8417	1.8598	1711	2979	1160	833	1953	3210	1600	1877	443	691	864	3356	595	496	542	1446	520	1142	1280	1875	756	1012	1660	1884	739	743	753	1062	1296	2266	1233	2161	871	2851	1029	1250	643	732	1298	1196	1055	176	2901	868	181	2474	1062	1678	216	466	201	674	928	656	1404	1186	45	100	522	135	620	58	156	82
GCF_024054535.1	NZ_JAMXLV010000022	NZ_JAMXLV010000022.1	Thermococcus alcaliphilus strain AEDII12 k141_22; whole genome shotgun sequence.	39766	36885	29327	28773	134751	0.3	0.27	0.22	0.21	0.43	0.9446	0.0471	0.9543	1.9857	67	59	126	37155	28469	21804	29096	116524	0.32	0.25	0.19	0.25	0	0.44	0.9023	0.2907	0.7553	1.9582	196	63	49	112	34519	26246	19398	26010	106173	0.32	0.25	0.18	0.24	0	0.43	0.9032	0.3002	0.7481	1.9602	168	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	3	3	36	32	79	84	231	0.16	0.14	0.34	0.36	0	0.71	0.8703	0.0898	0.9151	1.8727	0	2	2	929	671	1270	1646	4516	0.2	0.15	0.28	0.36	0	0.65	0.9006	0.2812	0.754	1.9221	750	1421	500	396	873	1607	696	902	234	388	564	1703	336	250	340	758	263	517	669	919	340	437	821	1012	377	401	411	504	702	1019	555	1081	417	1291	474	680	315	326	756	540	541	88	1597	415	82	1170	496	822	103	254	107	293	517	286	691	563	22	48	191	65	360	37	53	45
GCF_024054535.1	NZ_JAMXLV010000023	NZ_JAMXLV010000023.1	Thermococcus alcaliphilus strain AEDII12 k141_23; whole genome shotgun sequence.	52763	52737	38631	41009	185140	0.28	0.28	0.21	0.22	0.43	0.9424	0.0301	0.9708	1.9856	110	82	192	52353	39956	29998	41674	163981	0.32	0.24	0.18	0.26	0	0.44	0.901	0.333	0.723	1.9589	284	101	76	177	49703	37646	28267	39391	155007	0.32	0.24	0.18	0.26	0	0.43	0.9019	0.3375	0.7195	1.9598	236	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	2	2	24	24	51	55	154	0.16	0.16	0.33	0.36	0	0.69	0.8644	0.1211	0.887	1.8927	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1200	2210	809	572	1272	2504	1012	1351	275	586	665	2495	417	379	383	1083	326	757	984	1360	566	710	1173	1363	500	547	579	665	919	1429	812	1483	630	2016	728	975	467	507	1095	822	781	124	2094	729	164	1682	782	1248	155	361	147	483	742	410	1132	821	36	73	379	73	411	47	94	75
GCF_024054535.1	NZ_JAMXLV010000024	NZ_JAMXLV010000024.1	Thermococcus alcaliphilus strain AEDII12 k141_24; whole genome shotgun sequence.	47120	48839	37153	35089	168201	0.28	0.29	0.22	0.21	0.43	0.9432	0.0465	0.9546	1.9852	65	126	191	47448	39360	28904	38206	153918	0.31	0.25	0.19	0.25	0	0.44	0.9006	0.3031	0.7461	1.9593	457	61	112	173	43329	36008	26464	35046	140847	0.31	0.26	0.18	0.25	0	0.43	0.9007	0.3079	0.7422	1.961	381	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	2	3	37	32	83	82	234	0.16	0.14	0.35	0.35	0	0.71	0.8656	0.1158	0.8937	1.8693	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1116	1897	635	512	1057	2096	992	1272	327	545	639	2023	416	374	366	1033	356	741	987	1350	580	597	1162	1147	436	557	550	741	896	1331	758	1428	569	1795	560	846	405	501	1021	790	645	108	1799	701	129	1618	713	953	126	325	163	440	695	402	977	641	36	60	362	60	386	44	93	69
GCF_024054535.1	NZ_JAMXLV010000025	NZ_JAMXLV010000025.1	Thermococcus alcaliphilus strain AEDII12 k141_25; whole genome shotgun sequence.	110	90	89	68	357	0.31	0.25	0.25	0.19	0.44	0.913	0.2338	0.7911	1.9798	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_024054535.1	NZ_JAMXLV010000003	NZ_JAMXLV010000003.1	Thermococcus alcaliphilus strain AEDII12 k141_3; whole genome shotgun sequence.	242	151	272	90	755	0.32	0.2	0.36	0.12	0.48	0.8792	0.7343	0.4774	1.8869	0	1	1	151	242	90	272	755	0.2	0.32	0.12	0.36	0	0.48	0.875	0.7343	0.4774	1.8869	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_024054535.1	NZ_JAMXLV010000004	NZ_JAMXLV010000004.1	Thermococcus alcaliphilus strain AEDII12 k141_4; whole genome shotgun sequence.	83	138	95	110	426	0.19	0.32	0.22	0.26	0.48	0.9048	0.322	0.7325	1.9737	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_024054535.1	NZ_JAMXLV010000005	NZ_JAMXLV010000005.1	Thermococcus alcaliphilus strain AEDII12 k141_5; whole genome shotgun sequence.	92	140	99	98	429	0.21	0.33	0.23	0.23	0.46	0.8937	0.212	0.8235	1.9784	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_024054535.1	NZ_JAMXLV010000006	NZ_JAMXLV010000006.1	Thermococcus alcaliphilus strain AEDII12 k141_6; whole genome shotgun sequence.	8049	6940	4235	5719	24943	0.32	0.28	0.17	0.23	0.4	0.932	0.2231	0.8014	1.9616	33	1	34	7451	6172	3798	5404	22825	0.31	0.26	0.18	0.25	0	0.44	0.893	0.3344	0.7232	1.9344	40	29	1	30	7358	6079	3681	5256	22374	0.33	0.27	0.17	0.24	0	0.41	0.8981	0.3481	0.712	1.9418	25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	0	3	31	41	87	94	253	0.12	0.16	0.34	0.37	0	0.72	0.8402	0.1843	0.8432	1.854	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	172	264	151	124	185	285	182	224	39	84	143	312	83	38	77	136	73	99	110	250	72	114	110	213	70	52	96	129	174	203	97	211	70	318	121	111	55	48	126	69	79	13	337	71	12	235	108	206	34	64	26	46	172	89	145	122	5	7	56	15	93	5	19	9
GCF_024054535.1	NZ_JAMXLV010000007	NZ_JAMXLV010000007.1	Thermococcus alcaliphilus strain AEDII12 k141_7; whole genome shotgun sequence.	213	273	199	186	871	0.24	0.31	0.23	0.21	0.44	0.8886	0.1572	0.8574	1.9838	0	2	2	255	197	168	185	805	0.31	0.25	0.21	0.23	0	0.44	0.903	0.3516	0.7162	1.9592	0	0	1	1	105	104	60	109	378	0.28	0.28	0.16	0.29	0	0.45	0.8987	0.2947	0.7705	1.9644	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	8	2	5	0	4	3	2	0	2	3	4	1	1	2	4	3	4	1	6	6	7	3	2	0	1	0	0	4	0	4	1	1	0	2	1	0	1	2	0	0	0	5	1	0	2	6	3	3	2	0	1	1	1	4	1	0	1	2	0	0	0	1	1
GCF_024054535.1	NZ_JAMXLV010000008	NZ_JAMXLV010000008.1	Thermococcus alcaliphilus strain AEDII12 k141_8; whole genome shotgun sequence.	9357	8507	6471	6071	30406	0.31	0.28	0.21	0.2	0.41	0.9378	0.0795	0.9237	1.9765	18	10	28	8695	7038	4955	6195	26883	0.32	0.27	0.18	0.23	0	0.41	0.9045	0.2667	0.7721	1.9499	43	12	10	22	6888	5602	3757	4846	21093	0.33	0.27	0.17	0.23	0	0.4	0.9047	0.274	0.7671	1.9491	43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	67	44	94	118	323	0.21	0.14	0.29	0.37	0	0.66	0.8707	0.3204	0.7267	1.9115	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	147	226	132	101	177	246	118	207	52	75	119	316	81	47	78	141	79	78	129	206	82	98	122	200	65	52	116	113	181	229	127	174	77	246	121	109	52	71	140	77	81	11	333	72	16	237	94	167	24	54	20	58	153	79	117	138	3	9	45	10	73	8	11	11
GCF_024054535.1	NZ_JAMXLV010000009	NZ_JAMXLV010000009.1	Thermococcus alcaliphilus strain AEDII12 k141_9; whole genome shotgun sequence.	194	142	123	158	617	0.31	0.23	0.2	0.26	0.46	0.8833	0.2793	0.7552	1.9797	1	0	1	175	133	114	147	569	0.31	0.23	0.2	0.26	0	0.46	0.8886	0.2628	0.7678	1.9825	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0