Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_000004195.4 | NC_030677 | NC_030677.2 | Xenopus tropicalis strain Nigerian chromosome 1; UCB_Xtro_10.0; whole genome shotgun sequence. | 65309660 | 65297996 | 43309776 | 43249471 | 304263 | 217471166 | 0.3 | 0.3 | 0.2 | 0.2 | 0 | 0.4 | 0.9432 | 0.0008 | 0.9992 | 1.9694 | 1664 | 1672 | 3336 | 31496694 | 32834346 | 20890365 | 21293143 | 102271 | 106616819 | 0.29 | 0.3 | 0.2 | 0.21 | 0 | 0.41 | 0.9183 | 0.0816 | 0.9252 | 1.9649 | 62839 | 1438 | 1443 | 2881 | 1464001 | 1217869 | 1071387 | 1152983 | 0 | 4906240 | 0.3 | 0.25 | 0.21 | 0.24 | 0 | 0.45 | 0.8686 | 0.3146 | 0.7485 | 1.948 | 0 | 23728458 | 25008443 | 15578491 | 15793046 | 93862 | 80202300 | 0.29 | 0.33 | 0.19 | 0.19 | 0 | 0.38 | 0.8923 | 0.1557 | 0.8655 | 1.9359 | 0 | 185 | 199 | 384 | 95049 | 94675 | 65382 | 68062 | 0 | 323168 | 0.29 | 0.26 | 0.21 | 0.23 | 0 | 0.44 | 0.8658 | 0.2965 | 0.7642 | 1.9412 | 70 | 842788 | 858657 | 550553 | 548876 | 1000 | 2801874 | 0.29 | 0.33 | 0.19 | 0.19 | 0 | 0.38 | 0.8849 | 0.1822 | 0.847 | 1.9297 | 0 | 14 | 5 | 19 | 255 | 341 | 347 | 434 | 0 | 1377 | 0.19 | 0.25 | 0.25 | 0.32 | 0 | 0.57 | 0.8889 | 0.2652 | 0.7755 | 1.9641 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 41114 | 45104 | 17696 | 26531 | 33014 | 39664 | 28075 | 31493 | 23807 | 29635 | 32781 | 47911 | 29126 | 7579 | 24101 | 28013 | 28353 | 29685 | 26992 | 33185 | 42969 | 15727 | 23067 | 32547 | 45586 | 21843 | 18422 | 29725 | 23519 | 32432 | 25403 | 28510 | 16713 | 24424 | 36848 | 24044 | 22297 | 19106 | 20186 | 22016 | 27668 | 7791 | 52294 | 19002 | 24306 | 22836 | 19611 | 38685 | 24297 | 25953 | 6615 | 7468 | 22708 | 25961 | 24599 | 32587 | 9294 | 8962 | 8283 | 7461 | 35578 | 14704 | 23024 | 8303 |
GCF_000004195.4 | NC_030678 | NC_030678.2 | Xenopus tropicalis strain Nigerian chromosome 2; UCB_Xtro_10.0; whole genome shotgun sequence. | 54062746 | 53993437 | 36319329 | 36310460 | 348989 | 181034961 | 0.3 | 0.3 | 0.2 | 0.2 | 0 | 0.4 | 0.9444 | 0.0008 | 0.9992 | 1.9711 | 1770 | 1673 | 3443 | 28897444 | 30094857 | 19599199 | 19942500 | 17271 | 98551271 | 0.28 | 0.29 | 0.21 | 0.22 | 0 | 0.43 | 0.9144 | 0.0942 | 0.9145 | 1.9689 | 76271 | 1287 | 1230 | 2517 | 1244666 | 1037904 | 953001 | 1011490 | 0 | 4247061 | 0.3 | 0.24 | 0.22 | 0.24 | 0 | 0.46 | 0.8674 | 0.3184 | 0.746 | 1.9481 | 0 | 21630215 | 22740651 | 14391611 | 14600709 | 10874 | 73374060 | 0.29 | 0.33 | 0.19 | 0.19 | 0 | 0.38 | 0.8904 | 0.1611 | 0.8618 | 1.938 | 0 | 422 | 218 | 640 | 104792 | 106342 | 75427 | 82739 | 0 | 369300 | 0.29 | 0.27 | 0.21 | 0.23 | 0 | 0.44 | 0.8766 | 0.2582 | 0.7929 | 1.9523 | 0 | 834570 | 866229 | 583737 | 580535 | 1000 | 2866071 | 0.28 | 0.32 | 0.2 | 0.2 | 0 | 0.4 | 0.89 | 0.1908 | 0.8402 | 1.944 | 0 | 51 | 122 | 173 | 2156 | 2756 | 3382 | 4157 | 0 | 12451 | 0.17 | 0.22 | 0.27 | 0.33 | 0 | 0.61 | 0.8949 | 0.2306 | 0.7986 | 1.9553 | 0 | 3 | 92 | 95 | 2429 | 2275 | 3034 | 3560 | 0 | 11298 | 0.21 | 0.2 | 0.27 | 0.32 | 0 | 0.58 | 0.8776 | 0.1192 | 0.8896 | 1.9755 | 0 | 35823 | 38740 | 14563 | 21820 | 28807 | 33933 | 24111 | 26011 | 21000 | 25929 | 26845 | 39828 | 24270 | 7844 | 20307 | 24944 | 24083 | 26110 | 23452 | 27311 | 38261 | 13904 | 20845 | 26855 | 40268 | 20084 | 16419 | 25724 | 19155 | 28361 | 22608 | 24265 | 15088 | 20042 | 30600 | 21133 | 19809 | 18193 | 17305 | 20535 | 24653 | 7413 | 43667 | 17025 | 21350 | 19963 | 18017 | 31795 | 20613 | 21768 | 6371 | 7368 | 18271 | 22673 | 21210 | 29117 | 7582 | 8968 | 8478 | 6868 | 30298 | 12238 | 20098 | 7568 |
GCF_000004195.4 | NC_030679 | NC_030679.2 | Xenopus tropicalis strain Nigerian chromosome 3; UCB_Xtro_10.0; whole genome shotgun sequence. | 45672985 | 45565900 | 31131842 | 31114018 | 388612 | 153873357 | 0.3 | 0.3 | 0.2 | 0.2 | 0 | 0.4 | 0.9444 | 0.0015 | 0.9985 | 1.9728 | 2068 | 2109 | 4177 | 24499406 | 25538442 | 16860134 | 17131410 | 80444 | 84109836 | 0.25 | 0.28 | 0.22 | 0.24 | 0 | 0.46 | 0.9071 | 0.1463 | 0.8716 | 1.9685 | 109162 | 1270 | 1336 | 2606 | 1278028 | 1085558 | 1000597 | 1050982 | 0 | 4415165 | 0.29 | 0.24 | 0.22 | 0.24 | 0 | 0.46 | 0.8682 | 0.3162 | 0.7466 | 1.9497 | 0 | 17843179 | 18835011 | 12079887 | 12181902 | 47514 | 60987493 | 0.28 | 0.32 | 0.2 | 0.2 | 0 | 0.39 | 0.8857 | 0.1853 | 0.8441 | 1.9394 | 0 | 159 | 136 | 295 | 71299 | 68435 | 48473 | 50632 | 0 | 238839 | 0.29 | 0.27 | 0.21 | 0.23 | 0 | 0.44 | 0.8672 | 0.3031 | 0.7609 | 1.9389 | 0 | 960946 | 965717 | 631972 | 640967 | 18693 | 3218295 | 0.29 | 0.32 | 0.19 | 0.2 | 0 | 0.39 | 0.8925 | 0.1598 | 0.8631 | 1.9425 | 0 | 625 | 617 | 1242 | 17381 | 22305 | 23216 | 29331 | 0 | 92233 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8826 | 0.2503 | 0.7851 | 1.9675 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 36262 | 39838 | 15486 | 23354 | 29110 | 35652 | 25176 | 27469 | 23403 | 26833 | 28809 | 41087 | 25787 | 8078 | 20774 | 25436 | 26500 | 28086 | 24819 | 28165 | 39567 | 13984 | 22386 | 29523 | 40343 | 21152 | 16493 | 26710 | 20444 | 29635 | 23236 | 25373 | 16151 | 21113 | 31840 | 22570 | 19993 | 20006 | 18091 | 22399 | 24764 | 7989 | 43139 | 17731 | 21688 | 21124 | 19388 | 31973 | 21183 | 22148 | 6664 | 7967 | 19126 | 23942 | 22175 | 30580 | 7080 | 9528 | 8977 | 6942 | 30977 | 11649 | 18962 | 7545 |
GCF_000004195.4 | NC_030680 | NC_030680.2 | Xenopus tropicalis strain Nigerian chromosome 4; UCB_Xtro_10.0; whole genome shotgun sequence. | 45480854 | 45469161 | 31274707 | 31387018 | 349579 | 153961319 | 0.3 | 0.3 | 0.2 | 0.2 | 0 | 0.41 | 0.9429 | 0.0019 | 0.9981 | 1.9742 | 1353 | 1509 | 2862 | 23430578 | 24414599 | 16288983 | 16580703 | 194383 | 80909246 | 0.28 | 0.3 | 0.21 | 0.21 | 0 | 0.42 | 0.9172 | 0.087 | 0.9201 | 1.9695 | 44065 | 1055 | 1140 | 2195 | 1152632 | 946368 | 889489 | 933530 | 0 | 3922019 | 0.29 | 0.24 | 0.22 | 0.24 | 0 | 0.46 | 0.8684 | 0.3139 | 0.7483 | 1.952 | 86 | 16934235 | 17869431 | 11640237 | 11790086 | 186915 | 58420904 | 0.29 | 0.33 | 0.19 | 0.19 | 0 | 0.38 | 0.8887 | 0.1739 | 0.8518 | 1.9379 | 0 | 208 | 238 | 446 | 93789 | 96839 | 67213 | 69797 | 0 | 327638 | 0.28 | 0.27 | 0.21 | 0.23 | 0 | 0.44 | 0.8651 | 0.283 | 0.7723 | 1.9476 | 0 | 628257 | 658098 | 432432 | 453209 | 3000 | 2174996 | 0.29 | 0.33 | 0.19 | 0.19 | 0 | 0.38 | 0.8857 | 0.1993 | 0.832 | 1.937 | 0 | 78 | 115 | 193 | 2855 | 3620 | 3438 | 4188 | 0 | 14101 | 0.2 | 0.26 | 0.24 | 0.3 | 0 | 0.54 | 0.887 | 0.2245 | 0.802 | 1.9762 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 33901 | 35976 | 13950 | 20216 | 25885 | 31532 | 21682 | 22638 | 19303 | 23737 | 24446 | 35374 | 22386 | 7299 | 18489 | 23575 | 21751 | 24937 | 21131 | 23410 | 35511 | 12311 | 19445 | 24609 | 37781 | 18730 | 16337 | 23032 | 17368 | 26287 | 20371 | 22105 | 14026 | 17924 | 28373 | 19553 | 19342 | 16986 | 16383 | 18832 | 21997 | 7120 | 38940 | 15315 | 19817 | 17512 | 16581 | 29589 | 19247 | 20616 | 5933 | 6861 | 16521 | 21261 | 20043 | 27882 | 7189 | 8206 | 7953 | 6434 | 31098 | 11718 | 18705 | 7095 |
GCF_000004195.4 | NC_030681 | NC_030681.2 | Xenopus tropicalis strain Nigerian chromosome 5; UCB_Xtro_10.0; whole genome shotgun sequence. | 48835630 | 48838765 | 33063751 | 33063013 | 232416 | 164033575 | 0.3 | 0.3 | 0.2 | 0.2 | 0 | 0.4 | 0.9444 | 0 | 1 | 1.9723 | 1347 | 1269 | 2616 | 23822646 | 24739025 | 16167725 | 16440444 | 39044 | 81208884 | 0.27 | 0.29 | 0.21 | 0.22 | 0 | 0.44 | 0.9117 | 0.0975 | 0.9124 | 1.9673 | 13156 | 987 | 995 | 1982 | 1077378 | 895242 | 798007 | 848163 | 0 | 3618790 | 0.3 | 0.25 | 0.21 | 0.24 | 0 | 0.45 | 0.8685 | 0.3078 | 0.7525 | 1.949 | 0 | 18356508 | 19262266 | 12329254 | 12455200 | 36044 | 62439272 | 0.29 | 0.32 | 0.19 | 0.19 | 0 | 0.39 | 0.8898 | 0.159 | 0.8636 | 1.9389 | 0 | 145 | 100 | 245 | 69221 | 67622 | 47628 | 51292 | 0 | 235763 | 0.3 | 0.27 | 0.2 | 0.23 | 0 | 0.43 | 0.8708 | 0.2828 | 0.7721 | 1.9437 | 0 | 505080 | 527661 | 341515 | 349319 | 0 | 1723575 | 0.28 | 0.33 | 0.19 | 0.21 | 0 | 0.39 | 0.8806 | 0.2213 | 0.8182 | 1.9306 | 0 | 42 | 155 | 197 | 2699 | 3350 | 3646 | 4494 | 0 | 14189 | 0.19 | 0.24 | 0.26 | 0.32 | 0 | 0.57 | 0.8865 | 0.2185 | 0.8069 | 1.973 | 0 | 161 | 0 | 161 | 4025 | 3788 | 5230 | 6118 | 0 | 19161 | 0.21 | 0.2 | 0.27 | 0.32 | 0 | 0.59 | 0.8747 | 0.1087 | 0.898 | 1.9723 | 0 | 30944 | 33107 | 12846 | 18910 | 23695 | 28197 | 20217 | 23171 | 17173 | 21665 | 24344 | 35042 | 21256 | 6606 | 17319 | 21636 | 20931 | 21480 | 20041 | 24330 | 31866 | 11019 | 17047 | 23988 | 32886 | 16539 | 14261 | 22292 | 17242 | 23453 | 18347 | 21154 | 12387 | 18194 | 26347 | 17983 | 16355 | 14987 | 15142 | 16857 | 20696 | 5985 | 38497 | 14311 | 17485 | 17187 | 14797 | 27611 | 16819 | 19155 | 5393 | 6330 | 16830 | 18831 | 17845 | 24224 | 6836 | 7219 | 6993 | 5258 | 26459 | 11262 | 16796 | 6247 |
GCF_000004195.4 | NC_030682 | NC_030682.2 | Xenopus tropicalis strain Nigerian chromosome 6; UCB_Xtro_10.0; whole genome shotgun sequence. | 45950915 | 45889145 | 31194673 | 31138766 | 312813 | 154486312 | 0.3 | 0.3 | 0.2 | 0.2 | 0 | 0.4 | 0.944 | 0.0016 | 0.9984 | 1.9723 | 1173 | 1070 | 2243 | 22746725 | 23657997 | 15533746 | 15820980 | 82022 | 77841470 | 0.28 | 0.29 | 0.21 | 0.22 | 0 | 0.43 | 0.9103 | 0.0995 | 0.9113 | 1.9698 | 50252 | 894 | 869 | 1763 | 963291 | 769549 | 717686 | 768696 | 0 | 3219222 | 0.3 | 0.24 | 0.21 | 0.24 | 0 | 0.46 | 0.8681 | 0.314 | 0.7483 | 1.9478 | 4 | 17458912 | 18339004 | 11780537 | 11900778 | 76130 | 59555361 | 0.29 | 0.32 | 0.19 | 0.2 | 0 | 0.39 | 0.8914 | 0.1578 | 0.8648 | 1.9428 | 63405 | 133 | 111 | 244 | 67299 | 66833 | 46168 | 50667 | 0 | 230967 | 0.29 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.8639 | 0.3031 | 0.7597 | 1.9372 | 0 | 528727 | 546528 | 374206 | 378173 | 0 | 1827634 | 0.28 | 0.31 | 0.2 | 0.2 | 0 | 0.4 | 0.8861 | 0.1936 | 0.838 | 1.9411 | 0 | 128 | 6 | 134 | 2174 | 2646 | 2338 | 2670 | 0 | 9828 | 0.22 | 0.27 | 0.23 | 0.28 | 0 | 0.51 | 0.839 | 0.2037 | 0.8228 | 1.9853 | 0 | 4 | 65 | 69 | 1661 | 1650 | 2281 | 2620 | 0 | 8212 | 0.2 | 0.2 | 0.28 | 0.32 | 0 | 0.6 | 0.8754 | 0.078 | 0.9268 | 1.9705 | 0 | 26245 | 30385 | 11264 | 16789 | 21735 | 25567 | 18265 | 19739 | 15916 | 18110 | 21118 | 31103 | 18623 | 6415 | 15977 | 19534 | 18097 | 19672 | 18112 | 19867 | 27499 | 9991 | 14831 | 20109 | 29431 | 15766 | 11096 | 18328 | 13883 | 21915 | 16005 | 17697 | 10869 | 15862 | 25344 | 15434 | 15556 | 13845 | 12556 | 15449 | 19164 | 5739 | 35932 | 13097 | 15221 | 14410 | 15149 | 26598 | 15683 | 16817 | 4786 | 6557 | 14287 | 16804 | 16896 | 21003 | 5364 | 7352 | 7050 | 4857 | 22262 | 9291 | 14306 | 5681 |
GCF_000004195.4 | NC_030683 | NC_030683.2 | Xenopus tropicalis strain Nigerian chromosome 7; UCB_Xtro_10.0; whole genome shotgun sequence. | 39435162 | 39367191 | 27283643 | 27279698 | 200236 | 133565930 | 0.3 | 0.29 | 0.2 | 0.2 | 0 | 0.41 | 0.9443 | 0.0009 | 0.9991 | 1.9752 | 1218 | 1284 | 2502 | 20954537 | 21687949 | 14584718 | 14764558 | 49042 | 72040804 | 0.28 | 0.3 | 0.21 | 0.21 | 0 | 0.42 | 0.9137 | 0.0998 | 0.9107 | 1.9683 | 63582 | 1020 | 1036 | 2056 | 927737 | 779954 | 731833 | 762290 | 0 | 3201814 | 0.29 | 0.24 | 0.22 | 0.24 | 0 | 0.47 | 0.8675 | 0.3215 | 0.7439 | 1.949 | 0 | 15637398 | 16326263 | 10693729 | 10774960 | 40072 | 53472422 | 0.29 | 0.32 | 0.2 | 0.2 | 0 | 0.39 | 0.8879 | 0.1766 | 0.8502 | 1.9422 | 0 | 162 | 161 | 323 | 64363 | 61601 | 45150 | 47799 | 0 | 218913 | 0.29 | 0.27 | 0.21 | 0.23 | 0 | 0.44 | 0.8616 | 0.3063 | 0.7581 | 1.9397 | 0 | 502583 | 526480 | 355548 | 366791 | 0 | 1751402 | 0.29 | 0.32 | 0.19 | 0.2 | 0 | 0.39 | 0.8879 | 0.1807 | 0.8469 | 1.9394 | 0 | 11 | 19 | 30 | 445 | 506 | 556 | 740 | 0 | 2247 | 0.2 | 0.23 | 0.25 | 0.33 | 0 | 0.58 | 0.8818 | 0.2122 | 0.8152 | 1.9691 | 0 | 10 | 35 | 45 | 13926 | 12592 | 19617 | 22574 | 0 | 68709 | 0.21 | 0.21 | 0.28 | 0.31 | 0 | 0.59 | 0.9039 | 0.1161 | 0.8916 | 1.9693 | 0 | 27213 | 28582 | 11011 | 16953 | 21332 | 24842 | 17773 | 19085 | 16559 | 19516 | 19828 | 28414 | 18889 | 6484 | 14843 | 18743 | 17889 | 20266 | 18366 | 20061 | 28926 | 9997 | 16577 | 19748 | 29260 | 15873 | 12324 | 18582 | 14772 | 21443 | 16801 | 18079 | 11584 | 15277 | 23427 | 15597 | 14842 | 14953 | 13667 | 16250 | 18330 | 5830 | 30854 | 12759 | 16126 | 14224 | 13992 | 24688 | 15255 | 15917 | 5351 | 6387 | 13881 | 17439 | 16480 | 21975 | 5823 | 6977 | 6954 | 5255 | 22488 | 9254 | 15349 | 5820 |
GCF_000004195.4 | NC_030684 | NC_030684.2 | Xenopus tropicalis strain Nigerian chromosome 8; UCB_Xtro_10.0; whole genome shotgun sequence. | 43038750 | 42873491 | 30522655 | 30298860 | 507754 | 147241510 | 0.29 | 0.29 | 0.21 | 0.21 | 0 | 0.41 | 0.9412 | 0.0056 | 0.9944 | 1.9769 | 1623 | 1954 | 3577 | 21903402 | 22828967 | 15747398 | 16142495 | 124234 | 76746496 | 0.27 | 0.29 | 0.21 | 0.22 | 0 | 0.43 | 0.9069 | 0.1149 | 0.8973 | 1.9707 | 441716 | 1261 | 1375 | 2636 | 1229509 | 1021703 | 974789 | 1032600 | 0 | 4258601 | 0.29 | 0.24 | 0.22 | 0.25 | 0 | 0.47 | 0.868 | 0.322 | 0.7434 | 1.9496 | 0 | 14347207 | 15185710 | 10056747 | 10234006 | 49631 | 49873301 | 0.28 | 0.32 | 0.2 | 0.2 | 0 | 0.4 | 0.8843 | 0.1956 | 0.8357 | 1.9393 | 0 | 217 | 452 | 669 | 110700 | 110889 | 83373 | 86041 | 0 | 391003 | 0.28 | 0.26 | 0.22 | 0.23 | 0 | 0.46 | 0.8581 | 0.314 | 0.7515 | 1.9462 | 4 | 1116851 | 1154500 | 774962 | 840484 | 7799 | 3894596 | 0.29 | 0.32 | 0.19 | 0.2 | 0 | 0.4 | 0.8865 | 0.1923 | 0.8394 | 1.943 | 0 | 121 | 76 | 197 | 2946 | 3390 | 3605 | 4798 | 0 | 14739 | 0.2 | 0.23 | 0.24 | 0.32 | 0 | 0.57 | 0.8708 | 0.3012 | 0.7453 | 1.9638 | 0 | 0 | 22 | 22 | 555 | 531 | 702 | 830 | 0 | 2618 | 0.21 | 0.2 | 0.27 | 0.32 | 0 | 0.59 | 0.8745 | 0.1111 | 0.8965 | 1.9754 | 0 | 36097 | 39281 | 14613 | 21743 | 27993 | 37567 | 23662 | 24735 | 22655 | 25863 | 25111 | 39105 | 24340 | 8175 | 19741 | 24719 | 24531 | 26782 | 23475 | 25922 | 39747 | 13811 | 21128 | 27034 | 40690 | 20843 | 15795 | 24826 | 18679 | 28857 | 22622 | 23379 | 15200 | 19714 | 30875 | 22446 | 20033 | 20082 | 17956 | 21621 | 24400 | 7908 | 40151 | 17807 | 20860 | 18425 | 19783 | 32342 | 19912 | 21047 | 6332 | 7809 | 18052 | 24135 | 23144 | 29981 | 7263 | 9553 | 9300 | 6934 | 28690 | 11180 | 18985 | 7647 |
GCF_000004195.4 | NC_030685 | NC_030685.2 | Xenopus tropicalis strain Nigerian chromosome 9; UCB_Xtro_10.0; whole genome shotgun sequence. | 26535206 | 26507931 | 19080754 | 19008327 | 86726 | 91218944 | 0.29 | 0.29 | 0.21 | 0.21 | 0 | 0.42 | 0.9443 | 0.0024 | 0.9976 | 1.98 | 972 | 1021 | 1993 | 14963049 | 15479984 | 10848876 | 11017091 | 33169 | 52342169 | 0.28 | 0.28 | 0.22 | 0.22 | 0 | 0.44 | 0.9106 | 0.1128 | 0.9 | 1.973 | 24076 | 844 | 920 | 1764 | 926104 | 754772 | 726273 | 765761 | 0 | 3172910 | 0.29 | 0.24 | 0.22 | 0.25 | 0 | 0.47 | 0.8688 | 0.3179 | 0.746 | 1.9507 | 4 | 10975579 | 11545751 | 7810418 | 7861762 | 27537 | 38221047 | 0.28 | 0.32 | 0.2 | 0.2 | 0 | 0.4 | 0.885 | 0.1921 | 0.8388 | 1.9433 | 0 | 84 | 69 | 153 | 35656 | 35713 | 25851 | 27562 | 0 | 124782 | 0.29 | 0.26 | 0.22 | 0.23 | 0 | 0.45 | 0.8651 | 0.3294 | 0.7421 | 1.9396 | 0 | 203355 | 209448 | 147763 | 146083 | 0 | 706649 | 0.28 | 0.32 | 0.2 | 0.2 | 0 | 0.4 | 0.8826 | 0.2278 | 0.8128 | 1.9387 | 0 | 8 | 4 | 12 | 168 | 219 | 211 | 281 | 0 | 879 | 0.2 | 0.26 | 0.23 | 0.31 | 0 | 0.54 | 0.8278 | 0.2856 | 0.7545 | 1.969 | 0 | 19 | 0 | 19 | 477 | 457 | 608 | 720 | 0 | 2262 | 0.21 | 0.2 | 0.27 | 0.32 | 0 | 0.59 | 0.8756 | 0.1058 | 0.9013 | 1.9747 | 0 | 25925 | 31424 | 9812 | 15889 | 19580 | 26591 | 16742 | 18132 | 16878 | 19115 | 20442 | 27940 | 18490 | 6486 | 14340 | 19905 | 17590 | 19841 | 17803 | 19099 | 29810 | 9725 | 16356 | 18526 | 30562 | 16316 | 11077 | 18715 | 13020 | 21667 | 17992 | 17144 | 11242 | 15402 | 23034 | 15423 | 15362 | 15493 | 12970 | 16665 | 18151 | 6212 | 31867 | 12920 | 14982 | 14055 | 15636 | 24820 | 14455 | 15822 | 4962 | 6619 | 14008 | 16173 | 17278 | 21073 | 5704 | 7825 | 7199 | 5049 | 21113 | 8904 | 14235 | 5536 |
GCF_000004195.4 | NC_030686 | NC_030686.2 | Xenopus tropicalis strain Nigerian chromosome 10; UCB_Xtro_10.0; whole genome shotgun sequence. | 14703849 | 14667877 | 11496084 | 11462613 | 102143 | 52432566 | 0.28 | 0.28 | 0.22 | 0.22 | 0 | 0.44 | 0.9394 | 0.0027 | 0.9973 | 1.9881 | 659 | 774 | 1433 | 7953141 | 8299721 | 6425509 | 6492850 | 19081 | 29190302 | 0.26 | 0.27 | 0.22 | 0.24 | 0 | 0.47 | 0.9055 | 0.1171 | 0.8951 | 1.9791 | 10072 | 538 | 539 | 1077 | 490416 | 397513 | 428880 | 455210 | 0 | 1772019 | 0.28 | 0.23 | 0.23 | 0.26 | 0 | 0.49 | 0.8696 | 0.3219 | 0.7423 | 1.9538 | 1 | 5110356 | 5434788 | 4073673 | 4106969 | 12340 | 18738126 | 0.27 | 0.31 | 0.21 | 0.21 | 0 | 0.42 | 0.8783 | 0.2257 | 0.8134 | 1.9487 | 0 | 60 | 51 | 111 | 26489 | 26294 | 21377 | 21470 | 0 | 95630 | 0.28 | 0.26 | 0.22 | 0.24 | 0 | 0.46 | 0.869 | 0.2928 | 0.7635 | 1.954 | 0 | 280045 | 285655 | 228055 | 225133 | 0 | 1018888 | 0.27 | 0.3 | 0.21 | 0.21 | 0 | 0.43 | 0.8836 | 0.1945 | 0.8368 | 1.9555 | 0 | 56 | 113 | 169 | 2599 | 3093 | 3151 | 4078 | 0 | 12921 | 0.2 | 0.24 | 0.24 | 0.31 | 0 | 0.56 | 0.8874 | 0.2187 | 0.8065 | 1.9765 | 0 | 0 | 51 | 51 | 1282 | 1241 | 1620 | 1925 | 0 | 6068 | 0.21 | 0.2 | 0.27 | 0.32 | 0 | 0.58 | 0.8753 | 0.1078 | 0.8997 | 1.976 | 0 | 13852 | 16869 | 5130 | 8342 | 11526 | 17536 | 10149 | 8657 | 10389 | 11253 | 8984 | 15808 | 9075 | 4372 | 7783 | 10454 | 9482 | 11321 | 10032 | 9048 | 17173 | 6233 | 9727 | 10795 | 17435 | 9711 | 5897 | 9092 | 6563 | 12409 | 9625 | 8734 | 6942 | 6644 | 11320 | 10310 | 8712 | 10004 | 7336 | 10893 | 11250 | 4470 | 15102 | 8908 | 9202 | 7094 | 9423 | 13052 | 7631 | 7716 | 3498 | 4360 | 5558 | 9629 | 10379 | 12455 | 2577 | 5327 | 5015 | 3270 | 10865 | 3876 | 7524 | 3812 |
NA | NC_006839 | NC_006839.1 | Xenopus (Silurana) tropicalis mitochondrion; complete genome. | 5461 | 4665 | 4940 | 2544 | 0 | 17610 | 0.31 | 0.26 | 0.28 | 0.14 | 0 | 0.42 | 0.9299 | 0.3988 | 0.6846 | 1.9492 | 12 | 1 | 13 | 3163 | 3236 | 3320 | 1662 | 0 | 11381 | 0.27 | 0.29 | 0.29 | 0.15 | 0 | 0.44 | 0.894 | 0.4933 | 0.6414 | 1.9232 | 17 | 4 | 1 | 5 | 1192 | 1279 | 1141 | 747 | 0 | 4359 | 0.27 | 0.29 | 0.26 | 0.18 | 0 | 0.44 | 0.8951 | 0.57 | 0.5881 | 1.9064 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7 | 2 | 9 | 194 | 164 | 148 | 135 | 0 | 641 | 0.3 | 0.26 | 0.23 | 0.21 | 0 | 0.44 | 0.8834 | 0.296 | 0.7495 | 1.965 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 29 | 0 | 33 | 19 | 43 | 13 | 28 | 73 | 19 | 4 | 18 | 20 | 30 | 4 | 7 | 43 | 28 | 21 | 58 | 38 | 12 | 18 | 42 | 11 | 5 | 41 | 57 | 13 | 21 | 44 | 39 | 37 | 13 | 43 | 52 | 19 | 32 | 18 | 18 | 43 | 11 | 2 | 34 | 23 | 11 | 32 | 25 | 0 | 1 | 9 | 6 | 8 | 39 | 25 | 0 | 24 | 1 | 2 | 5 | 5 | 28 | 4 | 39 | 13 |