GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the whole sequence	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the whole sequence	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the whole sequence	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the whole sequence	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the whole sequence	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_021026215.1	NZ_JAJNCV010000001	NZ_JAJNCV010000001.1	Microbacterium sp. JC 701 spades_K_25_97_1; whole genome shotgun sequence.	246255	249089	590180	592459	291	1678274	0.15	0.15	0.35	0.35	0.7	0.9107	0.0076	0.9924	1.8753	877	707	1584	216663	228724	559707	507941	1513035	0.15	0.15	0.37	0.34	0	0.7	0.8645	0.1699	0.8523	1.867	1710	854	686	1540	211111	222941	546456	495924	1476432	0.14	0.15	0.37	0.34	0	0.7	0.8643	0.1694	0.8527	1.8663	1610	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7	4	11	143	168	241	283	835	0.17	0.2	0.29	0.34	0	0.63	0.8818	0.2216	0.8086	1.9305	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8008	8443	403	697	3044	21706	2840	412	5452	7371	549	4085	517	11584	559	8519	584	20511	15364	176	20989	5768	25740	4405	12364	16983	152	1386	612	4764	21085	1046	24424	63	518	27068	8475	13176	8518	34555	6707	23890	639	26190	2074	1099	7316	196	112	761	14047	28138	28	824	403	269	118	6158	12325	3831	607	95	1326	2076
GCF_021026215.1	NZ_JAJNCV010000009	NZ_JAJNCV010000009.1	Microbacterium sp. JC 701 spades_K_25_97_10; whole genome shotgun sequence.	110	126	123	143	0	502	0.22	0.25	0.25	0.28	0.53	0.8649	0.143	0.8666	1.9937	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_021026215.1	NZ_JAJNCV010000002	NZ_JAJNCV010000002.1	Microbacterium sp. JC 701 spades_K_25_97_2; whole genome shotgun sequence.	121516	123002	284888	289396	93	818895	0.15	0.15	0.35	0.35	0.7	0.9041	0.0139	0.9862	1.8795	296	477	773	108288	108176	266563	242484	725511	0.15	0.15	0.36	0.33	0	0.7	0.8672	0.1588	0.8606	1.8734	855	281	457	738	105659	105744	260654	237089	709146	0.15	0.15	0.37	0.33	0	0.7	0.8667	0.1581	0.8612	1.8714	729	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	77	48	121	150	396	0.19	0.12	0.31	0.38	0	0.68	0.8792	0.339	0.715	1.8816	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	12	20	264	309	435	500	1508	0.17	0.21	0.29	0.33	0	0.62	0.8853	0.1993	0.8278	1.9402	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3764	4566	246	390	1546	11417	1558	306	2496	3433	263	2239	307	5560	304	4123	321	9425	6906	133	9653	2817	11979	2237	6223	8027	124	737	294	2356	9679	610	11339	68	300	13392	4261	6359	4239	16269	3176	11728	367	12212	1094	655	3139	128	80	349	6635	12856	18	462	212	179	51	2703	6095	1892	389	53	634	1009
GCF_021026215.1	NZ_JAJNCV010000003	NZ_JAJNCV010000003.1	Microbacterium sp. JC 701 spades_K_25_97_3; whole genome shotgun sequence.	71708	74331	178729	180515	96	505379	0.14	0.15	0.35	0.36	0.71	0.9036	0.0229	0.9774	1.8673	294	188	482	63540	68529	170274	155909	458252	0.14	0.15	0.37	0.34	0	0.71	0.8631	0.1664	0.8554	1.8628	494	283	184	467	63052	67984	169237	154833	455106	0.14	0.15	0.37	0.34	0	0.71	0.8628	0.1664	0.8553	1.8607	478	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	17	17	31	32	97	0.18	0.18	0.32	0.33	0	0.65	0.8617	0.0159	0.9844	1.9344	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6	3	9	137	140	194	221	692	0.2	0.2	0.28	0.32	0	0.6	0.8974	0.128	0.8826	1.9613	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2415	2228	127	191	875	6816	827	91	1726	2205	127	1217	155	3750	167	2409	153	6381	4629	42	6383	1672	8099	1446	3623	5402	39	433	153	1526	6084	307	7841	18	124	8347	2474	4099	2610	11236	2005	7198	143	7914	723	293	2516	71	30	224	4420	9173	7	222	168	69	38	2030	3670	1097	168	21	408	647
GCF_021026215.1	NZ_JAJNCV010000004	NZ_JAJNCV010000004.1	Microbacterium sp. JC 701 spades_K_25_97_4; whole genome shotgun sequence.	41786	40275	99187	101340	194	282782	0.15	0.14	0.35	0.36	0.71	0.9026	0.0291	0.9713	1.8688	84	164	248	36766	39274	97929	88196	262165	0.14	0.15	0.37	0.34	0	0.71	0.8643	0.1545	0.8629	1.8618	341	82	162	244	36592	39107	97537	87836	261072	0.14	0.15	0.37	0.34	0	0.71	0.8643	0.1558	0.8618	1.861	337	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	2	2	34	32	53	55	174	0.2	0.18	0.3	0.32	0	0.62	0.8778	0.0668	0.9365	1.9562	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1442	1212	67	94	532	3742	426	41	912	1364	83	716	68	1965	98	1569	80	3736	2802	22	3708	884	4632	762	1991	3062	34	268	105	836	3659	167	4349	15	91	4992	1560	2369	1550	6515	1178	4224	99	4728	367	167	1389	28	13	138	2433	5049	2	140	83	44	10	1067	2104	546	107	10	224	354
GCF_021026215.1	NZ_JAJNCV010000005	NZ_JAJNCV010000005.1	Microbacterium sp. JC 701 spades_K_25_97_5; whole genome shotgun sequence.	37621	38069	89758	91562	99	257109	0.15	0.15	0.35	0.36	0.71	0.9	0.0159	0.9843	1.8742	139	96	235	33489	34769	85918	78639	232815	0.14	0.15	0.37	0.34	0	0.7	0.8631	0.1626	0.8575	1.8654	237	131	95	226	32629	33914	83876	76792	227211	0.14	0.15	0.37	0.34	0	0.71	0.8625	0.1617	0.8584	1.8637	233	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	0	4	47	59	81	104	291	0.16	0.2	0.28	0.36	0	0.64	0.8819	0.2373	0.7931	1.9305	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1235	1298	77	100	440	3475	461	75	793	1130	79	660	70	1795	104	1246	72	3236	2169	35	3097	818	3962	755	1862	2694	29	251	101	747	3078	177	3658	15	81	4184	1306	2099	1345	5296	989	3794	107	4031	329	178	1165	39	15	130	2330	4317	8	116	62	60	13	977	1811	544	110	11	202	294
GCF_021026215.1	NZ_JAJNCV010000006	NZ_JAJNCV010000006.1	Microbacterium sp. JC 701 spades_K_25_97_6; whole genome shotgun sequence.	1316	1212	1260	1761	0	5549	0.24	0.22	0.23	0.32	0.54	0.9372	0.207	0.8182	1.9829	3	0	3	1171	965	1088	1528	4752	0.24	0.18	0.25	0.33	0	0.58	0.9094	0.2887	0.7534	1.9565	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	3	1171	965	1088	1528	4752	0.24	0.18	0.25	0.33	0	0.58	0.9094	0.2887	0.7534	1.9565	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_021026215.1	NZ_JAJNCV010000007	NZ_JAJNCV010000007.1	Microbacterium sp. JC 701 spades_K_25_97_8; whole genome shotgun sequence.	145	161	117	108	0	531	0.27	0.3	0.22	0.2	0.42	0.9107	0.0923	0.9118	1.9815	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_021026215.1	NZ_JAJNCV010000008	NZ_JAJNCV010000008.1	Microbacterium sp. JC 701 spades_K_25_97_9; whole genome shotgun sequence.	73	101	150	179	0	503	0.15	0.2	0.3	0.36	0.65	0.8678	0.2491	0.7804	1.9202	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0