GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the whole sequence	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the whole sequence	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the whole sequence	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the whole sequence	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the whole sequence	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_017572165.1	NZ_JAGEQR010000001	NZ_JAGEQR010000001.1	Salmonella sp. 32011103201800106SM NODE_1; whole genome shotgun sequence.	380451	378374	396261	394655	1549741	0.25	0.24	0.26	0.25	0.51	0.9527	0.0048	0.9952	1.9997	727	798	1525	312223	315486	325415	363442	1316566	0.24	0.24	0.24	0.27	0.51	0.904	0.1671	0.8531	1.9804	1848	693	771	1464	304906	308401	318287	355079	1286673	0.24	0.24	0.24	0.27	0	0.51	0.9045	0.1657	0.8542	1.9808	1835	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	5	7	240	163	253	257	913	0.26	0.18	0.28	0.28	0	0.55	0.8735	0.2682	0.7835	1.9554	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	7	18	296	313	396	445	1450	0.2	0.22	0.27	0.31	0	0.58	0.8829	0.1616	0.8525	1.9713	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11775	4623	5034	3075	5730	8638	5647	13142	4071	6658	8442	14877	3011	8057	3384	8051	3141	9974	6092	10779	21224	7221	4593	13968	12783	9347	2268	5698	7924	4022	9831	5745	7830	2696	2890	7935	3834	3232	4560	12577	7143	9796	13896	14392	2785	6915	5187	1205	2351	6098	4012	17518	6670	3374	747	2691	134	2950	9940	7712	5979	874	457	1686
GCF_017572165.1	NZ_JAGEQR010000010	NZ_JAGEQR010000010.1	Salmonella sp. 32011103201800106SM NODE_10; whole genome shotgun sequence.	20247	21475	22777	24756	89255	0.23	0.24	0.26	0.28	0.53	0.9426	0.0711	0.9314	1.996	69	22	91	18099	18730	20541	23133	80503	0.23	0.24	0.25	0.28	0.54	0.9018	0.1607	0.8575	1.9807	124	58	22	80	17091	17651	19323	21820	75885	0.23	0.24	0.25	0.28	0	0.53	0.9052	0.1531	0.8634	1.9835	124	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6	0	6	80	106	130	154	470	0.17	0.23	0.28	0.33	0	0.6	0.8776	0.2199	0.8073	1.9533	1	0	1	23	18	36	39	116	0.2	0.16	0.31	0.34	0	0.65	0.887	0.162	0.8528	1.9326	694	291	297	152	285	511	315	677	237	411	385	980	122	453	153	495	158	688	421	640	1456	420	278	795	791	562	139	354	418	175	664	292	432	91	107	488	259	159	294	722	427	692	761	874	163	363	340	36	90	355	230	1206	308	169	23	136	9	179	636	549	320	43	28	97
GCF_017572165.1	NZ_JAGEQR010000011	NZ_JAGEQR010000011.1	Salmonella sp. 32011103201800106SM NODE_11; whole genome shotgun sequence.	21873	21411	21117	21575	85976	0.25	0.25	0.25	0.25	0.5	0.9477	0.0214	0.9788	1.9999	54	37	91	15888	14044	14753	16598	61283	0.27	0.23	0.23	0.27	0.5	0.8971	0.1842	0.8386	1.9664	362	50	34	84	15023	13136	13593	15380	57132	0.27	0.24	0.23	0.26	0	0.49	0.8969	0.1893	0.8345	1.9661	217	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	475	329	191	197	403	425	329	433	214	245	398	718	234	280	233	362	166	405	264	444	991	354	224	594	633	380	76	150	334	244	359	256	298	217	245	421	147	153	262	541	301	334	720	377	96	340	273	173	99	226	132	367	198	162	152	150	9	282	319	328	201	39	36	106
GCF_017572165.1	NZ_JAGEQR010000012	NZ_JAGEQR010000012.1	Salmonella sp. 32011103201800106SM NODE_12; whole genome shotgun sequence.	17972	18058	20242	21083	77355	0.23	0.23	0.26	0.27	0.53	0.9432	0.0227	0.9777	1.9965	43	24	67	15645	15955	17822	19690	69112	0.23	0.23	0.26	0.29	0.54	0.9091	0.1517	0.8655	1.9849	122	42	23	65	15390	15685	17514	19322	67911	0.23	0.23	0.26	0.28	0	0.54	0.9097	0.1515	0.8658	1.9867	122	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	679	281	237	143	268	486	304	657	291	323	304	818	113	390	121	457	193	636	389	487	1341	466	247	664	752	566	94	284	306	173	709	251	374	94	86	448	249	138	272	652	379	544	727	843	138	351	234	30	70	257	220	1016	270	141	22	108	4	113	588	449	266	46	15	63
GCF_017572165.1	NZ_JAGEQR010000013	NZ_JAGEQR010000013.1	Salmonella sp. 32011103201800106SM NODE_13; whole genome shotgun sequence.	11284	11039	12725	11887	46935	0.24	0.24	0.27	0.25	0.52	0.938	0.045	0.9562	1.9978	20	24	44	9407	9551	10453	11626	41037	0.23	0.24	0.25	0.28	0.53	0.9038	0.1795	0.8449	1.9789	37	20	20	40	8998	9216	9803	10944	38961	0.23	0.25	0.24	0.28	0	0.52	0.905	0.1799	0.8453	1.982	37	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	15	18	19	24	76	0.2	0.24	0.25	0.32	0	0.57	0.9044	0.2072	0.8125	1.9794	0	2	2	47	37	69	79	232	0.2	0.16	0.3	0.34	0	0.64	0.8809	0.1867	0.8303	1.9383	377	122	177	85	183	231	204	393	137	182	220	487	82	268	90	267	112	357	197	274	715	252	168	363	409	288	76	174	214	108	345	183	262	60	67	244	99	85	115	355	229	296	414	491	65	229	138	30	53	145	103	538	170	88	17	88	4	70	299	236	166	27	9	55
GCF_017572165.1	NZ_JAGEQR010000014	NZ_JAGEQR010000014.1	Salmonella sp. 32011103201800106SM NODE_14; whole genome shotgun sequence.	7742	7709	9154	8455	33060	0.23	0.23	0.28	0.26	0.53	0.935	0.0418	0.9597	1.9963	11	19	30	6874	6405	7487	8316	29082	0.24	0.23	0.25	0.28	0.53	0.9024	0.1361	0.8765	1.9762	33	11	19	30	6874	6405	7487	8316	29082	0.24	0.23	0.25	0.28	0	0.53	0.9024	0.1361	0.8765	1.9762	33	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	277	138	114	87	134	225	205	229	126	103	78	469	35	126	45	244	97	229	170	153	588	266	97	291	329	247	25	83	112	42	323	67	146	42	31	266	114	44	132	243	128	248	369	343	66	213	84	12	37	96	68	377	74	48	14	56	2	46	255	265	80	15	13	13
GCF_017572165.1	NZ_JAGEQR010000015	NZ_JAGEQR010000015.1	Salmonella sp. 32011103201800106SM NODE_15; whole genome shotgun sequence.	6387	6599	6974	6367	26327	0.24	0.25	0.26	0.24	0.51	0.9423	0.0618	0.9404	1.999	7	39	46	5920	5825	5757	6558	24060	0.25	0.24	0.23	0.27	0.51	0.9012	0.1428	0.8709	1.9916	39	7	39	46	5920	5825	5757	6558	24060	0.25	0.24	0.23	0.27	0	0.51	0.9012	0.1428	0.8709	1.9916	39	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	191	179	136	110	182	169	210	215	64	74	99	332	41	64	43	170	93	142	120	135	405	294	63	232	226	158	31	84	91	53	264	95	120	26	42	158	79	36	78	147	87	203	346	242	45	263	64	13	41	88	33	212	89	75	7	62	1	24	178	328	104	33	12	19
GCF_017572165.1	NZ_JAGEQR010000016	NZ_JAGEQR010000016.1	Salmonella sp. 32011103201800106SM NODE_16; whole genome shotgun sequence.	850	1117	1876	2286	6129	0.14	0.18	0.31	0.37	0.68	0.888	0.2343	0.7908	1.8964	8	0	8	849	1113	1862	2278	6102	0.14	0.18	0.3	0.38	0.68	0.8773	0.2699	0.7737	1.8856	24	7	0	7	782	1042	1671	2064	5559	0.15	0.18	0.3	0.37	0	0.67	0.8791	0.2962	0.7531	1.8955	20	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	69	13	5	1	5	48	2	18	11	59	8	19	4	29	5	36	2	114	42	28	233	9	23	12	56	55	1	4	15	4	39	5	36	5	0	52	22	7	38	87	32	71	22	85	14	10	54	2	1	6	28	145	11	1	8	2	1	36	81	13	3	0	5	1
GCF_017572165.1	NZ_JAGEQR010000017	NZ_JAGEQR010000017.1	Salmonella sp. 32011103201800106SM NODE_17; whole genome shotgun sequence.	1101	1145	1171	1077	4494	0.24	0.25	0.26	0.24	0.5	0.9357	0.0614	0.9406	1.9992	2	8	10	973	910	917	1007	3807	0.25	0.22	0.27	0.26	0.53	0.9008	0.1822	0.8387	1.977	4	2	2	4	807	776	711	823	3117	0.27	0.25	0.23	0.25	0	0.47	0.906	0.1254	0.8853	1.9871	4	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	4	4	69	70	88	85	312	0.22	0.23	0.28	0.27	0	0.55	0.9026	0.1825	0.8378	1.9812	0	1	1	23	18	35	40	116	0.2	0.16	0.3	0.34	0	0.65	0.8809	0.1886	0.8288	1.9312	22	11	14	9	17	21	14	34	5	19	31	44	10	11	7	15	11	26	14	19	47	16	7	36	27	19	13	20	18	13	20	17	16	13	6	19	11	11	11	11	16	27	41	38	9	21	7	3	4	14	8	38	16	15	0	3	2	5	12	23	22	1	1	8
GCF_017572165.1	NZ_JAGEQR010000018	NZ_JAGEQR010000018.1	Salmonella sp. 32011103201800106SM NODE_18; whole genome shotgun sequence.	991	1115	718	902	3726	0.27	0.3	0.19	0.24	0.43	0.9093	0.1725	0.8424	1.9822	2	2	4	651	607	374	501	2133	0.29	0.22	0.23	0.26	0.49	0.9058	0.305	0.7525	1.9557	0	2	2	4	651	607	374	501	2133	0.29	0.22	0.23	0.26	0	0.49	0.9058	0.305	0.7525	1.9557	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18	23	7	7	10	19	18	20	10	6	33	23	4	5	12	17	20	11	9	24	15	16	9	29	16	7	6	10	18	9	10	12	4	21	7	10	5	3	4	10	9	4	32	5	5	22	8	12	6	6	4	11	12	8	10	6	1	5	3	10	6	2	1	6
GCF_017572165.1	NZ_JAGEQR010000019	NZ_JAGEQR010000019.1	Salmonella sp. 32011103201800106SM NODE_19; whole genome shotgun sequence.	410	436	537	400	1783	0.23	0.24	0.3	0.22	0.53	0.9157	0.1769	0.8426	1.9897	0	2	2	317	310	283	395	1305	0.24	0.23	0.22	0.31	0.53	0.8937	0.1996	0.8263	1.9769	0	0	2	2	317	310	283	395	1305	0.24	0.23	0.22	0.31	0	0.53	0.8937	0.1996	0.8263	1.9769	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	8	3	0	9	17	8	5	4	5	6	6	6	10	6	9	2	22	10	14	27	9	1	8	15	6	0	2	10	16	7	4	8	4	5	7	2	2	11	10	8	4	19	7	7	7	5	3	2	7	6	4	3	5	5	1	0	10	9	5	1	1	1	0
GCF_017572165.1	NZ_JAGEQR010000002	NZ_JAGEQR010000002.1	Salmonella sp. 32011103201800106SM NODE_2; whole genome shotgun sequence.	161176	163785	170402	186119	681482	0.24	0.24	0.25	0.27	0.52	0.9479	0.0521	0.9498	1.9977	392	267	659	139610	136833	149889	168017	594349	0.24	0.23	0.25	0.28	0.53	0.9056	0.1572	0.8603	1.9825	1043	372	251	623	134756	132366	144708	162286	574116	0.24	0.24	0.25	0.28	0	0.52	0.9059	0.1579	0.8598	1.9833	839	1	1	0	1	0	0	0	0	NA	0.5	0	0	1	1	2	129	103	147	180	559	0.23	0.2	0.26	0.31	0	0.57	0.9013	0.1915	0.834	1.9708	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	4	12	190	176	284	295	945	0.2	0.19	0.3	0.31	0	0.61	0.8884	0.1116	0.8971	1.9566	1	0	1	59	43	46	72	220	0.27	0.2	0.21	0.33	0	0.54	0.887	0.3772	0.6839	1.969	5305	2123	2215	1331	2617	4076	2500	5643	1892	2661	3422	7053	1137	3648	1394	3881	1386	4687	2751	4262	10230	3324	1971	6198	5961	4453	969	2347	3060	1702	4686	2267	3487	922	1074	3950	1821	1292	2101	5511	3482	4441	6005	6910	1264	2996	2230	437	929	2636	1810	8240	2450	1346	282	1079	50	1285	4597	3798	2491	384	202	717
GCF_017572165.1	NZ_JAGEQR010000020	NZ_JAGEQR010000020.1	Salmonella sp. 32011103201800106SM NODE_20; whole genome shotgun sequence.	394	332	352	492	1570	0.25	0.21	0.22	0.31	0.54	0.9269	0.2513	0.779	1.9828	1	0	1	394	332	352	492	1570	0.25	0.21	0.22	0.31	0.54	0.9269	0.2513	0.779	1.9828	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	394	332	352	492	1570	0.25	0.21	0.22	0.31	0	0.54	0.9269	0.2513	0.779	1.9828	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_017572165.1	NZ_JAGEQR010000021	NZ_JAGEQR010000021.1	Salmonella sp. 32011103201800106SM NODE_21; whole genome shotgun sequence.	294	368	463	334	1459	0.2	0.25	0.32	0.23	0.55	0.9269	0.2736	0.7601	1.9793	0	1	1	363	292	332	462	1449	0.25	0.2	0.23	0.32	0.55	0.9222	0.2721	0.7615	1.9789	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	363	292	332	462	1449	0.25	0.2	0.23	0.32	0	0.55	0.9222	0.2721	0.7615	1.9789	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_017572165.1	NZ_JAGEQR010000022	NZ_JAGEQR010000022.1	Salmonella sp. 32011103201800106SM NODE_23; whole genome shotgun sequence.	192	220	327	406	1145	0.17	0.19	0.29	0.35	0.64	0.8907	0.1757	0.8391	1.936	2	0	2	187	219	325	402	1133	0.18	0.18	0.28	0.36	0.64	0.8841	0.2243	0.7998	1.9323	0	1	0	1	26	22	35	49	132	0.2	0.17	0.27	0.37	0	0.64	0.8809	0.25	0.7802	1.931	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	2	1	0	0	0	0	1	2	0	0	3	0	2	0	0	0	3	0	0	5	1	0	0	1	2	0	0	0	0	2	0	0	0	0	2	0	0	0	3	0	2	0	1	0	1	2	0	0	0	0	4	0	0	0	0	0	0	0	0	0	1	0	0
GCF_017572165.1	NZ_JAGEQR010000023	NZ_JAGEQR010000023.1	Salmonella sp. 32011103201800106SM NODE_24; whole genome shotgun sequence.	255	210	196	236	897	0.28	0.23	0.22	0.26	0.48	0.9118	0.1894	0.827	1.9925	4	0	4	139	105	126	165	535	0.23	0.21	0.25	0.31	0.56	0.9036	0.2309	0.8024	1.9686	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	29	32	42	50	153	0.19	0.21	0.27	0.33	0	0.6	0.8987	0.1399	0.872	1.9623	2	0	2	110	73	84	115	382	0.28	0.2	0.22	0.3	0	0.52	0.9085	0.3219	0.7329	1.9748	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_017572165.1	NZ_JAGEQR010000024	NZ_JAGEQR010000024.1	Salmonella sp. 32011103201800106SM NODE_28; whole genome shotgun sequence.	147	109	127	180	563	0.26	0.19	0.23	0.32	0.55	0.913	0.3211	0.7235	1.975	1	0	1	147	109	127	180	563	0.26	0.19	0.23	0.32	0.55	0.913	0.3211	0.7235	1.975	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	0	1	147	109	127	180	563	0.26	0.19	0.23	0.32	0	0.55	0.913	0.3211	0.7235	1.975	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCF_017572165.1	NZ_JAGEQR010000003	NZ_JAGEQR010000003.1	Salmonella sp. 32011103201800106SM NODE_3; whole genome shotgun sequence.	115624	118401	123181	134471	491677	0.24	0.24	0.25	0.27	0.52	0.9487	0.0557	0.9463	1.9976	260	204	464	97069	99439	107429	119774	423711	0.24	0.24	0.25	0.28	0.53	0.9051	0.1584	0.8604	1.9816	514	242	191	433	94603	96880	104676	116800	412959	0.24	0.24	0.25	0.28	0	0.53	0.9057	0.1589	0.86	1.982	455	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	0	3	78	60	100	111	349	0.22	0.17	0.28	0.32	0	0.6	0.9051	0.1982	0.8311	1.957	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9	7	16	252	287	331	356	1226	0.21	0.23	0.27	0.29	0	0.56	0.8889	0.13	0.883	1.9775	1	0	1	23	18	36	39	116	0.2	0.16	0.31	0.34	0	0.65	0.887	0.162	0.8528	1.9326	3809	1434	1594	892	1713	2592	1695	4171	1377	2174	2364	4699	819	2690	993	2685	1035	3521	2173	3237	7462	2313	1393	4325	4185	3240	684	1755	2445	1226	3322	1633	2511	719	717	2661	1321	946	1576	4120	2440	3160	4244	5113	889	2077	1654	290	622	1801	1387	6315	1882	1049	168	742	45	941	3470	2481	1796	261	127	478
GCF_017572165.1	NZ_JAGEQR010000004	NZ_JAGEQR010000004.1	Salmonella sp. 32011103201800106SM NODE_4; whole genome shotgun sequence.	93556	96649	104122	112338	406665	0.23	0.24	0.26	0.28	0.53	0.9473	0.0542	0.9474	1.9963	214	144	358	81400	82179	92352	102188	358119	0.23	0.23	0.25	0.28	0.53	0.906	0.1482	0.8682	1.9823	431	206	139	345	78920	79901	89425	99058	347304	0.23	0.23	0.25	0.28	0	0.53	0.9065	0.1475	0.8689	1.9829	427	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	62	38	69	84	253	0.24	0.15	0.27	0.33	0	0.6	0.8616	0.3384	0.7169	1.9472	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	1	2	28	36	50	58	172	0.16	0.21	0.29	0.34	0	0.63	0.8987	0.1994	0.8222	1.945	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3290	1249	1217	681	1331	2354	1311	3380	1208	1872	1930	3790	622	2253	729	2533	775	3080	1898	2639	6545	1984	1242	3488	3673	2886	552	1495	1933	880	2986	1214	2191	530	547	2400	1136	783	1379	3507	2167	2770	3556	4513	724	1643	1383	186	477	1534	1202	5273	1445	704	114	612	35	768	3015	2118	1395	214	96	331
GCF_017572165.1	NZ_JAGEQR010000005	NZ_JAGEQR010000005.1	Salmonella sp. 32011103201800106SM NODE_5; whole genome shotgun sequence.	91749	94624	102299	112566	401238	0.23	0.24	0.25	0.28	0.54	0.9462	0.0632	0.9392	1.9954	232	117	349	76345	79041	87781	98579	341746	0.23	0.23	0.25	0.29	0.54	0.9049	0.1609	0.8576	1.9804	259	223	107	330	73268	75898	84841	95156	329163	0.23	0.23	0.25	0.29	0	0.54	0.9053	0.163	0.856	1.9809	257	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	5	7	110	111	149	161	531	0.21	0.21	0.28	0.3	0	0.58	0.8903	0.075	0.9296	1.9712	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3048	1066	1197	653	1214	2228	1272	3253	1130	1693	1720	3849	571	2087	688	2221	772	3031	1755	2540	6279	1845	1132	3324	3336	2571	493	1346	1732	913	2720	1197	2099	421	466	2305	1090	757	1279	3272	1912	2789	3321	4212	886	1631	1358	167	537	1416	1091	5251	1329	739	141	523	25	713	3068	2117	1300	207	98	325
GCF_017572165.1	NZ_JAGEQR010000006	NZ_JAGEQR010000006.1	Salmonella sp. 32011103201800106SM NODE_6; whole genome shotgun sequence.	73050	75121	75632	82095	305898	0.24	0.25	0.25	0.27	0.52	0.9481	0.055	0.9469	1.9986	162	115	277	62513	62046	65283	72858	262700	0.24	0.24	0.25	0.27	0.52	0.9043	0.1639	0.8548	1.9799	267	151	108	259	60803	60322	63446	70819	255390	0.24	0.24	0.25	0.27	0	0.52	0.905	0.1622	0.8562	1.981	263	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	1	5	77	83	106	123	389	0.2	0.21	0.27	0.32	0	0.59	0.8903	0.1966	0.8239	1.967	2	0	2	83	70	87	109	349	0.23	0.19	0.26	0.32	0	0.58	0.8926	0.2003	0.8195	1.9605	2279	965	1005	658	964	1696	1020	2686	871	1272	1669	2914	530	1705	645	1834	686	2316	1327	1919	4424	1565	905	2897	2448	2123	422	1020	1522	666	2295	875	1642	471	513	1751	782	504	1019	2380	1437	1802	2876	3112	532	1381	903	194	383	1038	853	3563	1096	561	111	523	17	482	2072	1464	1037	158	85	265
GCF_017572165.1	NZ_JAGEQR010000007	NZ_JAGEQR010000007.1	Salmonella sp. 32011103201800106SM NODE_7; whole genome shotgun sequence.	51985	53690	58072	64224	227971	0.23	0.24	0.25	0.28	0.54	0.9424	0.0664	0.9362	1.9951	115	80	195	46357	46077	52852	59023	204309	0.23	0.23	0.25	0.29	0.54	0.9063	0.1533	0.8632	1.9848	224	111	77	188	44923	44527	51177	57235	197862	0.23	0.23	0.25	0.29	0	0.54	0.9064	0.151	0.865	1.9849	220	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1862	683	667	377	760	1309	817	1788	686	954	1018	2505	290	1265	363	1431	440	1835	1060	1379	3666	1229	633	2107	2135	1653	287	767	1043	470	1742	663	1277	212	254	1499	641	456	821	1941	1213	1631	2043	2637	432	1022	786	104	299	864	600	2964	752	403	90	327	16	383	1871	1392	785	114	58	183
GCF_017572165.1	NZ_JAGEQR010000008	NZ_JAGEQR010000008.1	Salmonella sp. 32011103201800106SM NODE_8; whole genome shotgun sequence.	40147	40606	40682	44340	165775	0.24	0.24	0.25	0.27	0.51	0.9445	0.0487	0.9531	1.9988	85	64	149	33357	32772	35386	38551	140066	0.24	0.24	0.25	0.27	0.52	0.9046	0.149	0.8673	1.9835	217	84	58	142	32616	32025	34557	37647	136845	0.24	0.24	0.25	0.27	0	0.52	0.9059	0.1456	0.8702	1.9843	217	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	3	3	45	58	71	87	261	0.17	0.22	0.27	0.33	0	0.61	0.8638	0.2274	0.7962	1.9585	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1196	536	496	273	558	934	550	1371	501	622	903	1541	289	884	341	954	344	1085	725	1124	2394	696	500	1524	1378	1172	239	516	886	385	1184	525	818	233	282	1002	426	302	543	1324	889	981	1469	1642	317	680	538	132	201	616	428	1926	594	316	56	246	13	301	1073	763	582	92	37	167
GCF_017572165.1	NZ_JAGEQR010000009	NZ_JAGEQR010000009.1	Salmonella sp. 32011103201800106SM NODE_9; whole genome shotgun sequence.	35603	36857	39144	41589	153193	0.23	0.24	0.26	0.27	0.53	0.9448	0.0476	0.9536	1.9974	65	72	137	31107	30864	34447	37664	134082	0.24	0.23	0.25	0.28	0.53	0.9071	0.1525	0.8649	1.985	174	64	71	135	30771	30540	34112	37303	132726	0.24	0.23	0.25	0.28	0	0.53	0.9069	0.1527	0.8648	1.9848	174	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1180	476	440	266	565	901	505	1372	477	707	765	1594	202	813	271	909	295	1075	741	950	2426	765	465	1469	1418	1053	228	552	786	334	1075	485	768	165	219	934	489	294	537	1377	758	1114	1399	1658	359	662	515	63	222	632	399	1886	526	287	59	308	18	263	1096	809	611	81	37	137