GBRAP

Genome-Based Retrieval and Analysis Parser


Bird : Agelaius_phoeniceus
Assembly Assembly Locus_ID Locus_ID Version Version Definition Sequence description bp_chromo_A Total number of 'A' nucleotides in the whole sequence bp_chromo_T Total number of 'T' nucleotides in the whole sequence bp_chromo_C Total number of 'C' nucleotides in the whole sequence bp_chromo_G Total number of 'G' nucleotides in the whole sequence bp_chromo_N Total number of 'N' nucleotides in the whole sequence bp_chromo_tot Total number of nucleotides in the whole sequence fr_chromo_A Frequency of 'A' nucleotides in the whole sequence fr_chromo_T Frequency of 'T' nucleotides in the whole sequence fr_chromo_C Frequency of 'C' nucleotides in the whole sequence fr_chromo_G Frequency of 'G' nucleotides in the whole sequence fr_chromo_N Frequency of 'N' nucleotides in the whole sequence GC_chromo Percentage of ā€˜G’ + ā€˜C’ nucleotides in the whole sequence topo_entropy_chromo Topological entropy of the whole sequence chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee shannon_chromo Shannon entropy of the whole sequence n_gene_pos Number of genes in the positive strand n_gene_neg Number of genes in the negative strand n_gene_tot Total number of genes in the chromosome bp_gene_A Number of 'A' bases in total genes bp_gene_T Number of 'T' bases in total genes bp_gene_C Number of 'C' bases in total genes bp_gene_G Number of 'G' bases in total genes bp_gene_N Number of 'N' bases in total genes bp_gene_tot Total number of bases in total genes fr_gene_A Frequency of 'A' bases among total gene bases fr_gene_T Frequency of 'T' bases among total gene bases fr_gene_C Frequency of 'C' bases among total gene bases fr_gene_G Frequency of 'G' bases among total gene bases fr_gene_N Frequency of 'N' bases among total gene bases GC_gene Percentage of 'G' and 'C' bases in total genes topo_entropy_gene Topological entropy calculated from total gene sequences chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes shannon_gene Shannon entropy score for total genes bp_gene_overlap_tot Number of bases overlapping between genes on two strands n_cds_pos Number of CDS in the positive strand n_cds_neg Number of CDS in the negative strand n_cds_tot Total number of CDS in the chromosome bp_cds_A Number of 'A' bases in total CDS (coding sequences) bp_cds_T Number of 'T' bases in total CDS bp_cds_C Number of 'C' bases in total CDS bp_cds_G Number of 'G' bases in total CDS bp_cds_N Number of 'N' bases in total CDS bp_cds_tot Total bases in total CDS fr_cds_A Frequency of 'A' bases among total CDS bases fr_cds_T Frequency of 'T' bases among total CDS bases fr_cds_C Frequency of 'C' bases among total CDS bases fr_cds_G Frequency of 'G' bases among total CDS bases fr_cds_N Frequency of 'N' bases among total CDS bases GC_cds Percentage of 'G' and 'C' bases in total CDS topo_entropy_cds Topological entropy calculated from total CDS sequences chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS shannon_cds Shannon entropy score for total CDS bp_cds_overlap_tot Number of bases overlapping between CDS on two strands bp_cds_intron_A Number of 'A' bases in total introns between CDS bp_cds_intron_T Number of 'T' bases in total introns between CDS bp_cds_intron_C Number of 'C' bases in total introns between CDS bp_cds_intron_G Number of 'G' bases in total introns between CDS bp_cds_intron_N Number of 'N' bases in total introns between CDS bp_cds_intron_tot Total bases in total introns between CDS fr_cds_intron_A Frequency of 'A' bases in total introns between CDS fr_cds_intron_T Frequency of 'T' bases in total introns between CDS fr_cds_intron_C Frequency of 'C' bases in total introns between CDS fr_cds_intron_G Frequency of 'G' bases in total introns between CDS fr_cds_intron_N Frequency of 'N' bases in total introns between CDS GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS shannon_cds_intron Shannon entropy score for total introns between CDS bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands n_ncRNA_pos Number of ncRNA in the positive strand n_ncRNA_neg Number of ncRNA in the negative strand n_ncRNA_tot Total number of ncRNA in the chromosome bp_ncRNA_A Number of 'A' bases in total ncRNA bp_ncRNA_T bp_ncRNA_T bp_ncRNA_C Number of 'C' bases in total ncRNA bp_ncRNA_G Number of 'G' bases in total ncRNA bp_ncRNA_N Number of 'N' bases in total ncRNA bp_ncRNA_tot Total bases in total ncRNA fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA shannon_ncRNA Shannon entropy score for total ncRNA bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands bp_nc_intron_A Number of 'A' bases in total introns between ncRNA bp_nc_intron_T Number of 'T' bases in total introns between ncRNA bp_nc_intron_C Number of 'C' bases in total introns between ncRNA bp_nc_intron_G Number of 'G' bases in total introns between ncRNA bp_nc_intron_N Number of 'N' bases in total introns between ncRNA bp_nc_intron_tot Total bases in total introns between ncRNA fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA shannon_nc_intron Shannon entropy score for total introns between ncRNA bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands n_tRNA_pos Number of tRNA in the positive strand n_tRNA_neg Number of tRNA in the negative strand n_tRNA_tot Total number of tRNA in the chromosome bp_tRNA_A Number of 'A' bases in total tRNA bp_tRNA_T Number of 'T' bases in total tRNA bp_tRNA_C Number of 'C' bases in total tRNA bp_tRNA_G Number of 'G' bases in total tRNA bp_tRNA_N Number of 'N' bases in total tRNA bp_tRNA_tot Total bases in total tRNA fr_tRNA_A Frequency of 'A' bases among total tRNA bases fr_tRNA_T Frequency of 'T' bases among total tRNA bases fr_tRNA_C Frequency of 'C' bases among total tRNA bases fr_tRNA_G Frequency of 'G' bases among total tRNA bases fr_tRNA_N Frequency of 'N' bases among total tRNA bases GC_tRNA Percentage of 'G' and 'C' bases in total tRNA topo_entropy_tRNA Topological entropy calculated from total tRNA sequences chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA shannon_tRNA Shannon entropy score for total tRNA bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands n_rRNA_pos Number of rRNA in the positive strand n_rRNA_neg Number of rRNA in the negative strand n_rRNA_tot Total number of rRNA in the chromosome bp_rRNA_A Number of 'A' bases in total rRNA bp_rRNA_T Number of 'T' bases in total rRNA bp_rRNA_C Number of 'C' bases in total rRNA bp_rRNA_G Number of 'G' bases in total rRNA bp_rRNA_N Number of 'N' bases in total rRNA bp_rRNA_tot Total bases in total rRNA fr_rRNA_A Frequency of 'A' bases among total rRNA bases fr_rRNA_T Frequency of 'T' bases among total rRNA bases fr_rRNA_C Frequency of 'C' bases among total rRNA bases fr_rRNA_G Frequency of 'G' bases among total rRNA bases fr_rRNA_N Frequency of 'N' bases among total rRNA bases GC_rRNA Percentage of 'G' and 'C' bases in total rRNA topo_entropy_rRNA Topological entropy calculated from total rRNA sequences chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA shannon_rRNA Shannon entropy score for total rRNA bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands ATG ATG AAG AAG GTA GTA ACT ACT GCA GCA GAG GAG GCT GCT ATT ATT TCC TCC TGG TGG AAT AAT GAA GAA TCA TCA ACG ACG AGT AGT AAC AAC TCT TCT GTG GTG TTC TTC TTT TTT CTG CTG GGT GGT CTC CTC GAT GAT CAG CAG ACC ACC CTA CTA TTG TTG TAT TAT GGA GGA ATC ATC CTT CTT GTC GTC ATA ATA ACA ACA GAC GAC CAC CAC CCC CCC TAC TAC GCC GCC AGC AGC CGC CGC AAA AAA GGC GGC TGC TGC GTT GTT GGG GGG AGA AGA TGT TGT CAT CAT TCG TCG GCG GCG TTA TTA CCT CCT AGG AGG CCA CCA TAG TAG CGG CGG CCG CCG CGT CGT CAA CAA TAA TAA TGA TGA CGA CGA
GCF_020745825.1NC_071674NC_071674.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 1; Agelaius phoeniceus 1.1; whole genome shotgun sequence.4644201547004159308375573089207815001551773090.30.30.20.200.40.94540.00690.99311.9696818723154119316976213431561266074613982719600673041970.270.290.210.2300.440.91630.1270.88391.9617175647186191337686528561763591055629630024689760.290.240.220.2500.480.8610.31650.74651.9376015988195178762971026132811366600600554930200.280.320.190.2100.40.89170.1830.84191.935055671223300231272244452507601137950.290.250.230.2300.460.86530.27690.77621.9383027137027718417179017775008980940.280.310.20.2100.410.89560.1730.85241.94660261541627681747976030310.210.230.240.3200.560.87080.22720.80681.96920000000000NANANANANANANANANANA01957023295659311853169442323515645129231358715183134362251513761518810863137431254817510140961423126696758913503143292594712001669013178837316556131331240491198694167431319512252126999677158321708963552346513815133689876109991798210761107274033672980231365413483160093671689766843553152535454118103847
GCF_020745825.1NC_071675NC_071675.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 2; Agelaius phoeniceus 1.1; whole genome shotgun sequence.3548534335611356237339272368556532001185193910.30.30.20.200.40.94460.00280.99721.97166060312631419826815648451948010310425169200497521910.270.290.210.2300.440.91930.11730.89181.969224305725341106564485465920491089519904020413980.280.230.230.2500.480.86220.31170.74931.94070114479321278120274621288235824100399271860.270.320.190.2100.410.89260.18480.83951.94340514798252212519619492202360901450.280.250.220.2500.470.85860.29790.76171.93260361353376766244384250800012333030.280.310.20.2200.420.89820.18320.84511.9474011718232303346451013320.170.230.260.3400.60.89160.27280.76511.95370000000000NANANANANANANANANANA01621919189518996921402318260127761020811171139351078017531120204377912610947105521449811668111932248861691170011364217779986577111515671413436105411057573856899140901053810118106217816125721454949601930410871117777808922715105921089953210512163261169911625140393265540752612929126634444105163186
GCF_020745825.1NC_071676NC_071676.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 3; Agelaius phoeniceus 1.1; whole genome shotgun sequence.3446331034100934229134492299197810001144706710.30.30.20.200.40.94620.0070.9931.9715581598117914503441161185799517475105905080507300030.270.30.210.2300.430.92140.11990.88971.9683201055335341067590068485919497316537221021105240.290.240.220.2500.480.86260.30880.75161.942401219666713727278780841887124200424447830.280.330.190.2100.40.89380.18120.84161.94030294271196281939715080155070696120.280.260.220.2400.460.8630.270.78021.94630124908127311853848856204261650.280.310.190.2100.40.89520.17980.84531.94830671318521226331709770.190.220.270.3200.590.88090.20730.81811.96310000000000NANANANANANANANANANA016690199965705100451435819535133231083911098138241117419672118834052952311414112401479011698120322298264341180112874219659723600512166697114490106391114075477466142211110110341101398081126941465350422052811161117548829880316004944893893224547868911210611511138633282536053673044131734848109343424
GCF_020745825.1NC_071677NC_071677.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 4; Agelaius phoeniceus 1.1; whole genome shotgun sequence.21829091220795071504914815170645600741289910.290.30.20.200.410.94560.00970.99031.97525004789781062262711727425733294980453880377283890.260.280.220.2300.450.91650.12480.88591.96721438452440892428781350471384615404800015686670.280.230.230.2600.490.86130.31440.74741.9395085222419530028577917663520070301834520.270.320.20.2200.420.89040.18810.83791.94260282654164901692714316143370620700.270.260.230.2400.470.86530.27150.77821.945108202080649589906249902841580.270.30.210.2200.430.89190.21440.81971.9512041561799812303610.170.220.270.3400.610.8830.24270.78761.95090000000000NANANANANANANANANANA0122021508339077189108241512210038754885871018281221381688453408670288217979115739073833417937460891699058166837930422381284949105488479758058214969104258622814185786376105571096545391375787838871585071951135566806860250342814526889586431065821254546407722739488301675342502
GCF_020745825.1NC_071678NC_071678.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 5; Agelaius phoeniceus 1.1; whole genome shotgun sequence.218562222209125414676288148390712200734650350.30.30.20.200.40.94530.01090.98921.971941442984385658009539634581228464938171100304126350.260.290.210.2300.450.9170.12550.88481.964615443361385746379497310008340537362061013921030.280.230.230.2600.490.8610.31210.74961.9375068407427734963452761850829521100241873750.270.320.190.2200.410.88940.19610.83121.93820383775206661946717561186300763240.260.230.240.2700.510.85680.30720.75611.9318017571418606811715812548506044250.250.290.220.2400.460.88660.21580.81911.9517010181722250720.110.240.310.3500.650.84070.42380.67531.89640000000000NANANANANANANANANANA01026312755359964379788127588933658676479068707712198780631096099744169451013675947495152864175790279281462268183529733542489554696667544905453694837569699978285130940498163924126208034811052566573102486421601323174124425280428001933020454480425820458534295671652330
GCF_020745825.1NC_071679NC_071679.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 6; Agelaius phoeniceus 1.1; whole genome shotgun sequence.186636891865488613379830132909320639893370.290.290.210.2100.420.94310.00360.99641.9799535543107889290769989767634042270558620323151270.250.280.230.2400.470.91530.12910.88191.968719015490465955476938389172458131476587018008280.270.220.240.2600.50.86020.32070.74391.9382071083048084456488579354660870255446400.260.310.20.2300.430.8870.20390.8251.94180295887226652366519785204070865220.260.240.240.2600.510.86530.28010.77411.939315393587100347647547033603290240.250.310.20.2400.440.88490.24980.79521.948203368010111615004470.180.230.260.3400.60.88820.26650.76681.95820000000000NANANANANANANANANANA0133661606241807981125131861612008769810545120138459154669300404375299404879713806103378383217465227116821053219777928945828501501212380961583466903491511266103101019811512678812942132565389150661059910565629689441245874367484289452304564107451064412387216458185325290010468306283233235
GCF_020745825.1NC_071680NC_071680.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 7; Agelaius phoeniceus 1.1; whole genome shotgun sequence.1084158410840424777292177440460371989750.290.290.210.2100.420.9440.00190.99811.980124823748551956555787475364125540424880186668730.260.290.220.2300.450.92010.11670.89181.967627351221221442293608237880256196274075010617590.280.230.230.2600.490.86230.31050.75041.94242642339394790506289491932338830151532470.270.320.190.2100.410.88820.19550.83141.9393853616122853544851427942290187130.280.250.230.2400.470.85780.27610.77581.941703864439315305263136901398540.290.290.210.2100.410.89770.14320.87161.960502133950577002160.180.230.260.3200.590.88650.23540.79371.95960000000000NANANANANANANANANANA08907108062686484279389525665150125758716152348628643922784824562052678069554852431223635006078569911477513129256473310370555386494836763601743053365639554539696747756925559506558760703825485480104358458816762581360961346426768217562703280915076541247355841504
GCF_020745825.1NC_071681NC_071681.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 8; Agelaius phoeniceus 1.1; whole genome shotgun sequence.1046630210428441778544777549470364351370.290.290.210.2100.430.94330.00380.99621.984429829359153448435963334392044243721070196007260.250.280.230.2400.470.91510.12040.88891.96955250526826152924811520363223892324998209406520.270.220.240.2600.510.86110.30950.7511.9395044383685034947315607635510050161803960.260.30.210.2300.440.88640.1990.82851.94550222446128531232110601105460463210.260.240.240.2600.50.86360.29510.76461.932304910149555358273716901716520.240.280.230.2600.490.87130.24360.80021.927401122333455301540.150.210.290.3400.640.88980.26930.77191.92980000000000NANANANANANANANANANA070038377218342416830907263824088535267064368750050772232392950054572717351584377109602802566152039942487024094601266563334855426034432587606650905039586035596878706627607858577958083168497664494091392815452892244059065713686911903072288414555421167646041603
GCF_020745825.1NC_071682NC_071682.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 9; Agelaius phoeniceus 1.1; whole genome shotgun sequence.92523919179324706142170100381000325041740.280.280.220.2200.430.94380.00760.99241.98726929856745227255046461342917637885230167868850.250.280.220.2400.470.91670.12370.88621.9738948622626248823893919224323295424281509069510.270.220.240.2700.510.85880.31420.74731.9376035563294046594264231629361780131814170.260.310.210.2300.440.88540.20510.82391.9477029265596319186793081240348710.270.250.230.2500.480.85820.30140.7561.9440115738122632751577938703929140.270.310.20.2200.410.89390.18980.83811.947502133751617702260.170.230.260.3400.60.85630.27670.76011.94790639318334349376013770.230.240.250.2700.530.88680.080.92431.99520657779841949398566648520626737445322628439697159486223213852459342726883485341781069428145550460210304485620974107239364984715404332312448597948974966580633446785719626217342566256723087481766283746366314952755224856375818655010462924283614505417154443841740
GCF_020745825.1NC_071683NC_071683.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 10; Agelaius phoeniceus 1.1; whole genome shotgun sequence.74478277561930582898559056710267444130.280.280.220.2200.440.94430.01410.9861.989125725351031560383536422248676227433640119225860.250.270.230.2500.490.91280.12270.88691.9762867720322242518215515059018863419281607141950.270.220.250.2700.520.85920.31080.75031.939502423541275966818554782053321090920080.250.30.210.2400.450.8840.20560.82371.949801619351090111184933494970409160.270.250.240.2400.480.86590.24770.79471.949603303634618262342757001214580.280.310.20.2100.410.88540.18540.84461.945208614232251245321010490.220.240.230.3100.540.87150.25580.77691.97510270276505949181051032130.20.180.290.3300.610.88090.11250.89371.9603052676204139030985162731647532842436948762992521338342007270938913381559340753290913421894521376080634135154232521744496240212893274916624526417939554742283557415537233450744566453522723984465828582912135921951543457843985288746248523039913817104832251214
GCF_020745825.1NC_071684NC_071684.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 11; Agelaius phoeniceus 1.1; whole genome shotgun sequence.64932896441163543786754003691000237736880.270.270.230.2300.460.94080.00750.99251.994419520940431961573581139256445728385780121803310.240.260.240.2600.50.91310.12260.88731.9719347917317634916436413350518041718592706642130.260.210.260.2800.530.85790.31370.74811.936202506832285056219583102172909094886130.240.290.230.2500.480.87930.22050.81321.9472013203383228177684273250306660.260.220.250.2700.520.86090.33840.73291.930618238662429619449209300885410.250.260.240.2500.490.89190.17520.84691.96460101171820280830.20.220.240.3400.580.8870.19520.82941.97030000000000NANANANANANANANANANA046975971115426454869734544932367397346062437457733111920245835102831550936712569866718794108325876344112134427091535453538742493268013123984410738284970262658295443263842154814450118834086411125252476130223021292397342594800652265125611087318587829561235
GCF_020745825.1NC_071685NC_071685.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 12; Agelaius phoeniceus 1.1; whole genome shotgun sequence.61914566175522484673548929570221066700.280.280.220.2200.440.94440.0060.9941.98981912063972419943270550119973502198514093213080.240.260.240.2600.50.91230.12140.8881.97033004517018335315826313099117654417993106457290.250.210.260.2800.540.85790.2960.76041.937101968576223959415546191725455074882440.230.280.230.2500.490.87790.22390.81061.94510981736203582286129830130460.260.250.230.2600.490.85110.25070.79271.939904055944798295983172001466750.260.320.20.2200.420.89920.19310.83561.95930581316522125831309570.170.230.270.3300.60.88510.24660.78381.95810000000000NANANANANANANANANANA044775537118326564709695844282291411842772322450532691833240832942970531634982592840919084073312372803720125426541353442634782589240413653893391737844952237955645396241939894660423919713786409826222510136125011236416942084684576264227401099321682829151081
GCF_020745825.1NC_071686NC_071686.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 13; Agelaius phoeniceus 1.1; whole genome shotgun sequence.58070415838633471463447410340211013420.280.280.220.2200.450.94150.00550.99451.99222031753782294578257958919164882124905089155600.240.260.240.2600.50.91290.12490.88531.9762650717415833213800911205915148815419405557500.260.210.260.2800.530.85620.32060.7441.933601852956212164115050951684543071642350.240.290.220.2500.470.8810.21520.81631.951024113583428374699472280309380.260.240.250.2600.510.86220.280.77611.943103992043556283943033101422010.250.30.210.2400.450.89050.23590.80331.96302134060567302290.180.250.250.3200.570.86260.39280.68311.95160000000000NANANANANANANANANANA040044991945219139295834356519293733381320283811290715142053296225044418312821527327165036732768650532981054240911623896320020612158112433153263311542992092472846781995379439773503159234373490208219451094199910853538370042805042161210885026847192632949
GCF_020745825.1NC_071687NC_071687.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 14; Agelaius phoeniceus 1.1; whole genome shotgun sequence.57810935813775458319845867890207648550.280.280.220.2200.440.94440.00320.99681.990121720942629829953332422236059726207290112967430.250.270.230.2500.480.91420.12360.88631.9703444120218338519861115781019849120874907636610.270.210.250.2700.520.85810.31910.74481.933512402310274345618481122065944090598220.250.30.220.2400.450.88070.21470.81731.9446011162755115245490947900204550.270.240.240.2500.490.8610.27980.77151.94203756740655282293195001384010.270.30.210.2200.430.89460.18180.84991.9455044811013015318705800.190.220.260.3200.590.89630.24030.78871.96220000000000NANANANANANANANANANA0532768801502322257288287519230064635529431546238416820773154402137535948389931699364228543914200843541751588337818205277402230322585180547304528414649792790585061432621589650164705248940615160308531851536265217554679463854678152846258212294367121035711477
GCF_020745825.1NC_071688NC_071688.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 15; Agelaius phoeniceus 1.1; whole genome shotgun sequence.5282283525047845888484536248500196583570.270.270.230.2300.460.94210.00880.99131.99631742294032342293261554820206902240029092185600.230.250.250.2700.520.91360.12510.88511.970539115721337015222712626418284519370806550440.260.20.260.2800.540.85670.32970.73811.932501834329209089615274691704779071574730.230.280.230.2600.490.880.21790.81491.9512011122372076574625163430263750.260.230.250.2600.510.8650.23490.80471.941503765637660302513047801360450.260.270.240.2300.470.89490.20790.82281.96810000000000NANANANANANANANANANA0000000000NANANANANANANANANANA03933530299023494270827141872009414441992201396029662362220837942818699736312286942217944285323371173589110125131294399334662200262011143580507334325128271361175813315636505296398816384251373821822063219244351058354742454281495319532291060282063925511204
GCF_020745825.1NC_071689NC_071689.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 16; Agelaius phoeniceus 1.1; whole genome shotgun sequence.45840234494153393173239066420169165500.270.270.230.2300.460.94290.01310.9871.996121220041227030993037615233220125685320106414470.240.260.240.2600.50.91170.12180.88781.9726694219518337817203714218219151819424306999800.250.210.260.2700.540.85870.30310.75511.936702134113245137717650331969240083197630.240.290.230.2500.480.87710.22260.81151.94550881667876014541250390232520.250.240.250.2500.50.86140.25540.79011.942272162291684013226142020604970.260.280.230.2400.460.88090.18260.84351.961022448678610603070.160.220.280.3400.630.87610.26280.77671.93770000000000NANANANANANANANANANA0453459801153268649627444479823874534521823384889358919442509369131805541399428569322201647623341823440301413268214334902386127482551129940204132394554352590589857732624461948724719214741354637287827361406242413394477438051506352744286411523601104135401306
GCF_020745825.1NC_071690NC_071690.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 17; Agelaius phoeniceus 1.1; whole genome shotgun sequence.43047154264585390035439020080163716620.260.260.240.2400.480.94060.00490.99511.99841891683571844718206161516832471847139074367190.230.260.250.2600.510.91390.11750.89141.9783129717215833014519411487716088316404405849980.260.20.260.2800.540.85580.32320.74161.935601391644159752112254001358155055727200.230.280.230.2600.490.87930.21820.81431.955601041436963851364039150151020.230.250.230.2900.520.86250.2760.7751.953085119096834583260342780.220.290.220.2700.480.88680.31130.75211.95401121835434801440.120.240.30.3300.630.86390.37750.70481.91820000000000NANANANANANANANANANA039945289971227045096487399918433975423420133918308716482203294926454600302920847654161139552678671134501102226210794136319621462160113135913455333346922094492851262038369841434036158835534187220521481163201593038214298452748522712264888302969127691019
GCF_020745825.1NC_071691NC_071691.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 18; Agelaius phoeniceus 1.1; whole genome shotgun sequence.3723513369075033848803394244700141940870.260.260.240.2400.480.93430.00580.99421.99851801633431685263188398815658491709451068445510.230.250.250.2700.520.90820.12470.88531.9692155515914430314475311372616140316959505894770.250.20.260.2800.550.85530.33120.73551.932601320425152029511618811275600052782010.230.280.240.2500.490.87070.24280.79721.942103121527462895236924380104480.260.250.240.2500.490.86310.24610.79041.9623049245364408945490189260.260.30.210.2300.440.86230.22540.80661.9353063912914716521206530.20.230.250.3200.580.88360.23740.79171.96160000000000NANANANANANANANANANA0391159488992017427777624344193936933975187843632825162718113210245049573302208588361712386728377064343899021141119406933562085228095833303782339443812175545347952469366742323723147336713501200921561215217685935613990407841825082230951286466725251179
GCF_020745825.1NC_071692NC_071692.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 19; Agelaius phoeniceus 1.1; whole genome shotgun sequence.37832123814756341164934380710144476880.260.260.240.2400.470.94030.0080.9921.99811901863762132713242236318913802096477085429330.240.260.240.2600.50.91330.1230.88661.9788190116716933615262312202616881317424106177030.260.210.260.2800.540.85590.31990.74471.934501627225190094814086211578014065148080.240.290.220.2500.470.87880.22590.80831.9511011102155955272606661240230570.270.230.250.2500.50.86520.28510.76781.95060211412055316619162450745580.270.280.220.2300.440.88160.23140.80371.944605167710310914504340.180.240.250.3300.590.88170.29130.75241.95730000000000NANANANANANANANANANA041685506103523034598721342672158410043882123443829791745222930962615494032372298830618174084308875863515114824061199438134512404222210783537361634334900216151365253232940454402387917983698398723242394119922361089396140204585476259324411061317775227991285
GCF_020745825.1NC_071693NC_071693.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 20; Agelaius phoeniceus 1.1; whole genome shotgun sequence.30100422969397288794328662120117335940.260.250.250.2400.490.94050.01060.98951.99971311733041768377199473417175661885299073659760.230.250.250.2700.520.9120.11480.89361.980418541231522751237499953614340014625805129430.250.20.270.2900.550.85570.31540.74751.933901382710160241413197421463137057680030.230.280.240.2600.50.87640.22680.80831.954607142127662793294030410115400.240.220.270.2800.540.85280.29020.76731.9295010201104869742100840405130.240.260.250.2500.490.88690.12730.88461.978400223236334501460.210.250.220.3100.530.82050.24050.79261.98220000000000NANANANANANANANANANA03365438570620004018560637691476334736691538334725251585182825542281415425761693700616963487252665053151897189189337872750191819467753107302729474136183044954387178030913710343713983444319219471877100517717573720360039533482086207087725794712432940
GCF_020745825.1NC_071694NC_071694.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 21; Agelaius phoeniceus 1.1; whole genome shotgun sequence.30074533020224278210428221850116319660.260.260.240.2400.480.94110.00930.99081.9991771773541838944208828017282491895243075507160.230.260.250.2600.510.91060.11730.89171.97861134115515831313048210561415362415727905469990.250.20.270.2800.550.85520.31750.7461.934711499665174709113734491520565061407700.230.280.240.2600.490.87660.23220.80391.9521020143453614835529553980208890.250.220.250.2900.540.86010.29820.76021.933202787129163270752971901138280.230.280.230.2500.480.8840.22130.81581.95480011111620240710.150.230.280.3400.620.8870.27610.76041.94510000000000NANANANANANANANANANA036144681785188739566429387116573620398515893537261515871833268922014655291418368121165038382493649632389341961954389230971899201684832023352326444651884513948052176315639793777142034943382205420061163211577235103820421738623162232942276754525541037
GCF_020745825.1NC_071695NC_071695.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 22; Agelaius phoeniceus 1.1; whole genome shotgun sequence.217630521316282111863212292950085432250.250.250.250.2500.50.93270.0130.98711.999984981821055696119198110752671159396044823400.220.240.260.2800.540.90650.11420.89471.975138773871606286150395856528322402821320.230.190.290.2900.580.85320.3230.74251.9260692045799977698070755671029457630.210.260.250.2700.530.86690.25550.78851.9459047111248142414101419055010.260.210.250.2700.530.84490.36510.72641.915903120537468266942802901233960.240.290.220.2500.470.88630.23260.81181.95630000000000NANANANANANANANANANA0000000000NANANANANANANANANANA01657205530810812316305120725842162227358413461638120296712861181224613076963739795192510063249196142077733020831464825105430618041649167229389392755263713801168239020865852104167999691671113842402017212524311581517143553711821781317675
GCF_020745825.1NC_071696NC_071696.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 23; Agelaius phoeniceus 1.1; whole genome shotgun sequence.214357921327732028117203098450083359530.260.260.240.2400.490.93850.00320.99681.99951181392571260273141051012079201313497051922000.240.260.250.2600.510.90850.12340.88691.9810105131236958057898012163312365704200750.240.190.280.2900.570.85380.31540.74791.926209451751088919871801965041038709360.230.280.240.2600.490.86810.25690.78851.94560461027272774233724450102830.280.270.230.2200.450.87070.22950.80531.962047644413385239440169730.270.290.220.2200.440.88540.2060.82631.96580101101620280740.140.220.270.3800.650.87470.39740.66961.90860000000000NANANANANANANANANANA026213385574148631504834309411322894314811112385199714841418203117343587220413216008127528131726493026476851357624321322521372152758722142488248436371470425035821902207733223006950290224751588142799220235112811279732402602169209686319194051897891
GCF_020745825.1NC_071697NC_071697.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 24; Agelaius phoeniceus 1.1; whole genome shotgun sequence.190563818745541995840200304550077795770.240.240.260.2600.510.92950.010.991.9994123128251797017900461859935939170034965830.210.240.270.2900.550.90320.12430.8861.9687702109116225840116470311084011107203706260.240.180.280.300.580.84890.34250.72991.91490581713683606606873673424025456160.210.260.260.2800.530.86240.26860.77951.938201171837523809399940240155840.220.240.270.2700.540.8650.2290.80751.9548070168544724881880309960.210.260.240.2900.530.88810.20110.82421.95970000000000NANANANANANANANANANA0000000000NANANANANANANANANANA02169321043611032651478325048502769266682220511711133911131782134930742027919512611002520153647142389534105844926622113974132839919292430221438711365395334981780196333072505759281021021211106299717793682317270230131901948215562414952261416691
GCF_020745825.1NC_071698NC_071698.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 25; Agelaius phoeniceus 1.1; whole genome shotgun sequence.177849417952141943906193815050074562640.240.240.260.2600.520.93280.00620.99391.9987142134276967149108349010687681142188042615950.220.240.260.2800.540.90130.12840.88361.97881258130123253911417424512401012472304141190.230.190.290.300.580.85240.32420.74231.9240706579815496745578806962030746150.210.260.260.2800.530.86230.26760.7811.94540661242634514430246800177590.250.240.250.2600.510.87330.19190.83721.9448049095451404953300197390.250.270.220.2600.480.87620.26410.78561.950902134250567002180.190.230.260.3200.580.90060.19490.82571.97220000000000NANANANANANANANANANA02737339442513412979531729748763085311883820181909156112792152149938192418100962641208288016235070281951312364432814256810221623321222026822377416515104458381019131715340729387903338217413791317106317903592734312633761992193211071515672291765779
GCF_020745825.1NC_071699NC_071699.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 26; Agelaius phoeniceus 1.1; whole genome shotgun sequence.1544010158139218572361910619780069010570.220.230.270.2800.550.92210.02610.97421.993111127238492618556973662923699976310024155900.190.220.30.2900.590.87830.19430.8321.9472071901011915816349750961909288102969840.210.170.310.3200.630.84170.34750.72741.88890284385334821359169390749100013701240.180.220.290.300.590.82760.38760.70321.88780861426352898308925760111980.230.230.290.2600.550.8680.32990.73231.924201756220019722517084450.180.280.220.3200.540.82510.48740.63841.840800223038425401640.180.230.260.3300.590.89870.24260.78361.96810000000000NANANANANANANANANANA01550216522767420353936237348122831875492122510491165563160987427211819807485210042283933331322273066122782144194760511191339712021196938491130399927081858970317620565812824113086977388417681471775186320716920292008614971111890738
GCF_020745825.1NC_071700NC_071700.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 27; Agelaius phoeniceus 1.1; whole genome shotgun sequence.155544715663511764963173801160066253720.230.240.270.2600.530.92390.01120.98891.997515415230691757210117871048550110519910040832080.210.220.280.2900.570.89560.13750.87651.9601116134133267903707302712700812561404160190.230.180.290.300.590.85010.3310.73741.9150645885738959696013738675028195320.20.240.270.2900.560.85190.28890.76641.9194063934303202368635510138690.240.230.260.2700.530.86180.24660.79771.9335030223247310432540126270.220.270.250.2600.510.8560.22490.81451.96270651116118120125307960.20.230.250.3200.570.87630.17210.84471.97660000000000NANANANANANANANANANA02489339641912602827526929029323118290990020511753148712032207141736212381105559571390294315684865294756310414942834251410681616400199928422374460817154496393923551729399130108033210205612941207127321473522563295029781862391239074517152691652907
GCF_020745825.1NC_071701NC_071701.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 28; Agelaius phoeniceus 1.1; whole genome shotgun sequence.1552448154341617517261715390065629800.240.240.270.2600.530.93280.01340.98671.9976156143299889577100070010158501090754039968810.20.220.280.2900.570.89750.12780.88321.962331411371292661065868379515126814392804855770.230.180.290.300.590.84960.33450.73581.91540609936720273663962726528027206990.20.250.270.2800.550.85490.28950.76651.92750941326822622260228680107740.260.210.250.2900.530.83730.3390.73981.9284035863901349237930147720.230.290.220.2600.480.87970.24730.79811.948902245668769202920.190.230.260.3100.580.88060.2080.81851.97060000000000NANANANANANANANANANA0252734595961796353855853729924361634709142403246921681645211019843765229510126740139432781802567037649291200493354724951527175740629093000281850021473514047152536191643153137918371525891454160115182659403359533164368206283428451098250025619551208
GCF_020745825.1NC_071702NC_071702.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 29; Agelaius phoeniceus 1.1; whole genome shotgun sequence.1402499140942716183451612384100060436550.230.230.270.2700.530.89980.00430.99571.99644825732544628518352413176301209680.220.240.280.2600.550.87980.14970.86981.98201492339975506776054980227610.20.230.310.2500.570.8550.3650.70311.93280163861797521580206630766040.190.210.280.3200.60.85480.2380.8011.9179010111914115311605290.230.260.290.2100.50.88210.25150.78551.983401539137714931208056170.270.250.270.2100.480.91110.16670.85251.99020000000000NANANANANANANANANANA03214461645163818251928070360.230.230.260.2700.530.88370.05830.94431.995501588637861541092264733398685290685212582211279198576343693518814911705411226877631483105248226136371172629922619867100551175827471692135100495651832181314
GCF_020745825.1NC_071703NC_071703.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 30; Agelaius phoeniceus 1.1; whole genome shotgun sequence.1474813146215315293051506539110059739100.250.240.260.2500.510.92510.01180.98831.99971059219766070973236973750778116050029122450.210.230.280.2900.560.89370.1310.88141.9648280491831746106148549887098795602862750.220.180.30.300.60.84760.32140.74451.909050281857582052391056561750021686650.20.240.270.2900.560.84170.32270.74511.916801101138533596448841080160450.240.20.290.2700.560.86070.26360.78651.9387087998757908995570362020.230.260.240.2600.510.86110.29260.76681.93850011101721230710.140.240.30.3200.620.8870.30470.75061.93870000000000NANANANANANANANANANA0159520082488512187334219976362071220956212971177125884515849002386143868241318411858106229812240346622298226217406921099225150718341657325910913207273017861058275921185302367145587681985715892121841224620501201779177360710801371134691
GCF_020745825.1NC_071704NC_071704.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 31; Agelaius phoeniceus 1.1; whole genome shotgun sequence.1242184124964113527271325236051697880.240.240.260.2600.520.88690.01330.98691.99971821539884411106613580613051104762270.180.240.320.2600.570.86520.29370.75381.9505047631101863726045371342723701090530.190.220.320.2800.60.85310.33620.731.911904616748451530485527002029360.190.190.270.3600.620.83630.30730.74971.880106391590151116331648063820.220.210.270.300.570.85530.28110.77971.9347022732404279527200101920.20.220.280.2900.580.87040.22870.81131.9350000000000NANANANANANANANANANA0000000000NANANANANANANANANANA078446013529985162388926015996023822274722682135163481052133898628472191746185101969789309195302125426844358351543113811136911713944459477114193132747026648420917128387330584390185473489470666471
GCF_020745825.1NC_071705NC_071705.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 32; Agelaius phoeniceus 1.1; whole genome shotgun sequence.891782881903907705982259036636490.240.240.250.2700.520.90870.0450.95651.998725285312753613256414713314904705562800.20.220.290.2900.580.88930.1590.85711.956901717349219684811435136370411390.220.180.280.3300.60.85090.35550.71941.91508315487538952119244903583520.20.240.270.2800.560.85590.31720.74871.9429076132404184120152289085490.210.170.30.3300.630.84630.30960.75271.9034030693553446744820155710.130.190.360.3200.680.83570.32740.73561.83570101142016230730.190.270.220.3200.530.85490.3560.69781.97360000000000NANANANANANANANANANA022829427159238551371722764029923122115516821015734115575516123220192419265461284043322010087362642142543678538144620312633414845515342213126138253332364153151027422051972317699
GCF_020745825.1NC_071706NC_071706.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 33; Agelaius phoeniceus 1.1; whole genome shotgun sequence.604253593263740035721131150026601820.230.220.280.2700.550.92890.02210.97811.992512511524032680537137242935845666050015846950.180.20.310.3100.620.87530.20290.82621.928710061131042174688040314803017983702473320.20.170.310.3200.630.84410.33130.73651.896601858212227122295252507575008893150.180.230.280.3100.590.82630.37990.70741.89370213851802934849034360.220.240.290.2500.540.8540.29040.77721.942046375215454554310198280.230.270.220.2700.490.8710.24220.79851.966302023422404801440.240.150.280.3300.610.88090.30520.74021.94740000000000NANANANANANANANANANA01318169819551115462920179633821491845328819891998527108281322461231454339097616468082870179129942824419411303512966110986156416053286102930362565165059229312354369264710267766208091534991541165416566818251883588819117829611
GCF_020745825.1NC_071707NC_071707.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 34; Agelaius phoeniceus 1.1; whole genome shotgun sequence.708423696993634357813202028529750.250.240.220.2900.510.8820.13170.8821.99425492455624411286542814001057610.250.190.270.2900.560.88630.23460.79941.97090538139988518581981061230.220.160.280.3400.620.84240.43310.67581.8608049435916448051090204480.230.260.220.2800.50.8160.55180.61571.88390000000000NANANANANANANANANANA0000000NANANANANANANANANANA0000000000NANANANANANANANANANA0000000000NANANANANANANANANANA0233343150693912516320383723232516462775211422280381110256151218537264767106572282556361089611216113314062610434672151915
GCF_020745825.1NC_071708NC_071708.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 35; Agelaius phoeniceus 1.1; whole genome shotgun sequence.612642629717703341720003026657030.230.240.260.2700.530.90260.02550.97491.9966156213137231652391973810601403270.20.250.310.2400.550.87420.26970.7741.97230921121052842394127130116010.180.230.340.2500.590.85190.33880.71831.932101136103512941307047720.190.180.270.3600.630.81320.33470.72731.8744001113628321619108260.160.340.260.2300.490.86970.41360.68161.95201582134712721673058740.270.230.220.2800.50.9280.21640.80591.9910000000000NANANANANANANANANANA0325555557631689024320.220.240.270.2800.540.89260.06470.93811.99350783815459051103141714338356027277128103152103320132031810962212733331572748123854135886819393256512011545432952361421737614214526711829
GCF_020745825.1NC_071709NC_071709.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome W; Agelaius phoeniceus 1.1; whole genome shotgun sequence.257066325444062046814205937350092217560.280.280.220.2200.450.94090.00820.99181.9913192342585344624720462256468276021405960.270.270.220.2400.460.92430.13940.87591.97750131629110329050917093220385740.290.240.230.2400.470.86530.310.75221.950482614521731384052386930017753270.280.320.190.2100.40.90460.1630.85541.952206391338126112871333052190.260.240.240.2500.50.88240.26420.77891.96660168831560012817142300595300.270.250.230.2400.480.9080.19760.82731.980700222340354701450.160.280.240.3200.570.87430.41750.66281.9530000000000NANANANANANANANANANA034540011020428030723824422622121534524649183193242235193221390164192248411206148208148237221214157127293228182186117226259714061531701661722791731903991138226187292568773802666111562
GCF_020745825.1NC_071710NC_071710.1Agelaius phoeniceus isolate BioBank_ID:100140 chromosome Z; Agelaius phoeniceus 1.1; whole genome shotgun sequence.213063122126837214520442144248165400715253420.30.30.20.200.40.94570.00420.99581.973633940774684885249372025558190661712581300296150130.270.30.210.2300.430.9210.11860.891.96566677299363662353450291910288303314623012482860.290.240.220.2500.470.86280.30810.75131.9412066835207495154432663348051791300233117860.280.320.190.2100.40.89270.18440.83921.93870262955163241532211864122280557380.290.250.220.2400.460.86060.28320.77021.9418018805319652411930212562506295040.30.310.190.200.390.8990.16620.85421.945500222535384701450.170.240.260.3200.590.90140.27240.76511.9610000000000NANANANANANANANANANA010000118393650619986871099477536873614380537192118317396215959236782673484946939723113618384765847840128755543353970864502872463816589462946368683657260025380503473458460293911857635068825215504798175848580118902935423467356433795120952888295117627870295865792031
NANC_018801NC_018801.1Agelaius phoeniceus mitochondrion; complete genome.50913983533023710167750.30.240.320.1400.460.92740.50630.61361.93921211332212834373816020113950.270.260.320.1500.470.88310.59410.58621.8998178192177198824951182078420.270.260.310.1600.470.88120.60270.58361.895510000000NANANANANANANANANANA0000000000NANANANANANANANANANA0000000NANANANANANANANANANA063919417713113506370.30.280.210.2100.420.87760.29210.75941.95240000000000NANANANANANANANANANA0222593359122249621205160658126231273429209185832172117751405449758547504360118321155481733261512611413027715275456626