GBRAP

Genome-Based Retrieval and Analysis Parser


Bird : Cygnus_atratus
Assembly Assembly Locus_ID Locus_ID Version Version Definition Sequence description bp_chromo_A Total number of 'A' nucleotides in the whole sequence bp_chromo_T Total number of 'T' nucleotides in the whole sequence bp_chromo_C Total number of 'C' nucleotides in the whole sequence bp_chromo_G Total number of 'G' nucleotides in the whole sequence bp_chromo_N Total number of 'N' nucleotides in the whole sequence bp_chromo_tot Total number of nucleotides in the whole sequence fr_chromo_A Frequency of 'A' nucleotides in the whole sequence fr_chromo_T Frequency of 'T' nucleotides in the whole sequence fr_chromo_C Frequency of 'C' nucleotides in the whole sequence fr_chromo_G Frequency of 'G' nucleotides in the whole sequence fr_chromo_N Frequency of 'N' nucleotides in the whole sequence GC_chromo Percentage of ā€˜G’ + ā€˜C’ nucleotides in the whole sequence topo_entropy_chromo Topological entropy of the whole sequence chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee shannon_chromo Shannon entropy of the whole sequence n_gene_pos Number of genes in the positive strand n_gene_neg Number of genes in the negative strand n_gene_tot Total number of genes in the chromosome bp_gene_A Number of 'A' bases in total genes bp_gene_T Number of 'T' bases in total genes bp_gene_C Number of 'C' bases in total genes bp_gene_G Number of 'G' bases in total genes bp_gene_N Number of 'N' bases in total genes bp_gene_tot Total number of bases in total genes fr_gene_A Frequency of 'A' bases among total gene bases fr_gene_T Frequency of 'T' bases among total gene bases fr_gene_C Frequency of 'C' bases among total gene bases fr_gene_G Frequency of 'G' bases among total gene bases fr_gene_N Frequency of 'N' bases among total gene bases GC_gene Percentage of 'G' and 'C' bases in total genes topo_entropy_gene Topological entropy calculated from total gene sequences chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes shannon_gene Shannon entropy score for total genes bp_gene_overlap_tot Number of bases overlapping between genes on two strands n_cds_pos Number of CDS in the positive strand n_cds_neg Number of CDS in the negative strand n_cds_tot Total number of CDS in the chromosome bp_cds_A Number of 'A' bases in total CDS (coding sequences) bp_cds_T Number of 'T' bases in total CDS bp_cds_C Number of 'C' bases in total CDS bp_cds_G Number of 'G' bases in total CDS bp_cds_N Number of 'N' bases in total CDS bp_cds_tot Total bases in total CDS fr_cds_A Frequency of 'A' bases among total CDS bases fr_cds_T Frequency of 'T' bases among total CDS bases fr_cds_C Frequency of 'C' bases among total CDS bases fr_cds_G Frequency of 'G' bases among total CDS bases fr_cds_N Frequency of 'N' bases among total CDS bases GC_cds Percentage of 'G' and 'C' bases in total CDS topo_entropy_cds Topological entropy calculated from total CDS sequences chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS shannon_cds Shannon entropy score for total CDS bp_cds_overlap_tot Number of bases overlapping between CDS on two strands bp_cds_intron_A Number of 'A' bases in total introns between CDS bp_cds_intron_T Number of 'T' bases in total introns between CDS bp_cds_intron_C Number of 'C' bases in total introns between CDS bp_cds_intron_G Number of 'G' bases in total introns between CDS bp_cds_intron_N Number of 'N' bases in total introns between CDS bp_cds_intron_tot Total bases in total introns between CDS fr_cds_intron_A Frequency of 'A' bases in total introns between CDS fr_cds_intron_T Frequency of 'T' bases in total introns between CDS fr_cds_intron_C Frequency of 'C' bases in total introns between CDS fr_cds_intron_G Frequency of 'G' bases in total introns between CDS fr_cds_intron_N Frequency of 'N' bases in total introns between CDS GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS shannon_cds_intron Shannon entropy score for total introns between CDS bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands n_ncRNA_pos Number of ncRNA in the positive strand n_ncRNA_neg Number of ncRNA in the negative strand n_ncRNA_tot Total number of ncRNA in the chromosome bp_ncRNA_A Number of 'A' bases in total ncRNA bp_ncRNA_T bp_ncRNA_T bp_ncRNA_C Number of 'C' bases in total ncRNA bp_ncRNA_G Number of 'G' bases in total ncRNA bp_ncRNA_N Number of 'N' bases in total ncRNA bp_ncRNA_tot Total bases in total ncRNA fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA shannon_ncRNA Shannon entropy score for total ncRNA bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands bp_nc_intron_A Number of 'A' bases in total introns between ncRNA bp_nc_intron_T Number of 'T' bases in total introns between ncRNA bp_nc_intron_C Number of 'C' bases in total introns between ncRNA bp_nc_intron_G Number of 'G' bases in total introns between ncRNA bp_nc_intron_N Number of 'N' bases in total introns between ncRNA bp_nc_intron_tot Total bases in total introns between ncRNA fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA shannon_nc_intron Shannon entropy score for total introns between ncRNA bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands n_tRNA_pos Number of tRNA in the positive strand n_tRNA_neg Number of tRNA in the negative strand n_tRNA_tot Total number of tRNA in the chromosome bp_tRNA_A Number of 'A' bases in total tRNA bp_tRNA_T Number of 'T' bases in total tRNA bp_tRNA_C Number of 'C' bases in total tRNA bp_tRNA_G Number of 'G' bases in total tRNA bp_tRNA_N Number of 'N' bases in total tRNA bp_tRNA_tot Total bases in total tRNA fr_tRNA_A Frequency of 'A' bases among total tRNA bases fr_tRNA_T Frequency of 'T' bases among total tRNA bases fr_tRNA_C Frequency of 'C' bases among total tRNA bases fr_tRNA_G Frequency of 'G' bases among total tRNA bases fr_tRNA_N Frequency of 'N' bases among total tRNA bases GC_tRNA Percentage of 'G' and 'C' bases in total tRNA topo_entropy_tRNA Topological entropy calculated from total tRNA sequences chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA shannon_tRNA Shannon entropy score for total tRNA bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands n_rRNA_pos Number of rRNA in the positive strand n_rRNA_neg Number of rRNA in the negative strand n_rRNA_tot Total number of rRNA in the chromosome bp_rRNA_A Number of 'A' bases in total rRNA bp_rRNA_T Number of 'T' bases in total rRNA bp_rRNA_C Number of 'C' bases in total rRNA bp_rRNA_G Number of 'G' bases in total rRNA bp_rRNA_N Number of 'N' bases in total rRNA bp_rRNA_tot Total bases in total rRNA fr_rRNA_A Frequency of 'A' bases among total rRNA bases fr_rRNA_T Frequency of 'T' bases among total rRNA bases fr_rRNA_C Frequency of 'C' bases among total rRNA bases fr_rRNA_G Frequency of 'G' bases among total rRNA bases fr_rRNA_N Frequency of 'N' bases among total rRNA bases GC_rRNA Percentage of 'G' and 'C' bases in total rRNA topo_entropy_rRNA Topological entropy calculated from total rRNA sequences chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA shannon_rRNA Shannon entropy score for total rRNA bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands ATG ATG AAG AAG GTA GTA ACT ACT GCA GCA GAG GAG GCT GCT ATT ATT TCC TCC TGG TGG AAT AAT GAA GAA TCA TCA ACG ACG AGT AGT AAC AAC TCT TCT GTG GTG TTC TTC TTT TTT CTG CTG GGT GGT CTC CTC GAT GAT CAG CAG ACC ACC CTA CTA TTG TTG TAT TAT GGA GGA ATC ATC CTT CTT GTC GTC ATA ATA ACA ACA GAC GAC CAC CAC CCC CCC TAC TAC GCC GCC AGC AGC CGC CGC AAA AAA GGC GGC TGC TGC GTT GTT GGG GGG AGA AGA TGT TGT CAT CAT TCG TCG GCG GCG TTA TTA CCT CCT AGG AGG CCA CCA TAG TAG CGG CGG CCG CCG CGT CGT CAA CAA TAA TAA TGA TGA CGA CGA
GCF_013377495.2NC_066362NC_066362.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 1; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.6238307962397098420675914207755025002089278180.30.30.20.200.40.95050.00020.99981.97251203122824312906950631776401198172502159571001022588670.270.290.210.2300.440.92260.11380.89551.9675364699969711967994016820179834766886465035354260.290.240.220.2500.470.86420.31310.74861.93950215521962388630714439744158129670756912140.270.320.190.2100.410.89650.17880.84451.94020136178314124332120459915809419204305630.290.260.220.2400.460.87350.25120.7921.95330813433842202547699561861027651950.280.310.20.2100.410.89950.16140.86211.9502325486418119171190035590.180.230.260.3300.590.88750.27050.76731.95590000000000NANANANANANANANANANA02813134107106121726123462302472149018077179792240219389326252037486581576520155190192359820824201073672310811197842032335659166491145819849125862273618443188331338713496235481855916845166941479320810233958773340691814519324145351494826487154681589865109796122921911618281223486411950393265908228348392175696599
GCF_013377495.2NC_066363NC_066363.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 2; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.4827374048136972320528273196970035001604367390.30.30.20.200.40.95030.00270.99731.97047818161597226691192476035515017982164132741000788617300.270.30.210.2200.430.92380.11030.89781.9656380215896421231648523530492516986559263022552640.290.240.220.2500.460.86370.3130.74881.93930164336061823865710700847117711731000571452830.280.330.190.2100.390.89860.16790.85291.93630140114254107428104882768477906903682260.290.260.220.2300.450.86860.24650.79561.949509843581026631640974656700033086630.290.310.20.200.40.90190.14190.87591.94870142236555595657863026700.210.230.240.3200.570.87940.22740.80451.970000000000NANANANANANANANANANA01809121596729411355152231907313848127951110613305132302215212816506410319131571192814885130531371521812721811812134772230199967334127938607148951159512371836492391528811968105409695937412397148695104233061131711734997290821725310053102564083582684791162611583137854029579457083668147425715107094087
GCF_013377495.2NC_066364NC_066364.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 3; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.3609286135882826243524842421034625001205410170.30.30.20.200.40.94940.00580.99421.9726692739143117246545189591041152907412719118500604543410.270.290.210.2300.440.92260.11510.89371.965152375585741132623931510649511659557340022035790.290.240.220.2500.470.86330.31210.74951.93790134125381497912387465209702488500468411690.270.320.190.2100.410.89530.18090.84231.934010112322410184297079738037553103482550.290.250.220.2300.450.87180.25170.79371.94850739334763112484945503692024910830.290.310.20.200.40.89970.14910.87021.94690102131426509613751022990.190.220.260.3300.590.87560.27880.7671.95240000000000NANANANANANANANANANA01745820985654510665144971985313616114361068713610118872131712508504599761245211679145381240612701226207036117771339521993983772651248479741473610958120617982861614402119421022499828789128631475055732209811568119419501900716696941899614036640278251170811353130523995610260543712142175616111704086
GCF_013377495.2NC_066365NC_066365.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 4; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.234170622336505515447886154472641000776782670.30.30.20.200.40.94960.00110.99891.96964344468801035719811393365694849177151471000364152010.270.290.210.2300.440.92280.11320.89511.962911416355379734388627318084321706348969013773860.290.240.220.2500.470.86470.30920.75121.9381137573979848713250094975601850500266729580.270.320.190.2100.410.89550.18160.84181.9354062601225069248561367153768401736520.290.260.220.2300.450.86960.25770.78651.94880525341541675329797342295017391080.290.310.20.200.40.90230.1330.88191.946565521234246637502260.190.20.280.3300.610.87630.29090.75121.94870000000000NANANANANANANANANANA0105121309441526544923911891839670026831855676771301576853391624079317106942378917915139924316745481641363661304285765748918949696972575101539891337419648163735442828992663389137507169760857075782104296343606626804151486072627175822226473950405523078735352970812695
GCF_013377495.2NC_066366NC_066366.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 5; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.193521681927476013674733136059741000659086350.290.290.210.2100.410.94870.00450.99551.97855265771103104590341160431173785938202986500376454240.250.280.220.2400.470.91980.1210.88841.963413036443471914459617377147411055435394016832130.280.230.230.2600.490.86220.3180.74551.9355072687708238938498953155856110260828500.260.310.20.2300.430.89080.19820.82951.9321064741385423652985425214446501942070.280.250.220.2400.460.87170.25380.79081.9497060964963690639298541067550020507150.280.310.20.2100.410.90310.14790.8711.95020671317921825632209750.180.220.260.3300.590.88740.23430.79411.96160000000000NANANANANANANANANANA01266715317474479551155515745108297752867510692862115442900643747386935589571139097958669183074955985299041696981725318886155121100887198493638056731064894258187894167811118011499512615282920896526480783712103701373253152537452299197921510547263657045295293410281359579343317
GCF_013377495.2NC_066367NC_066367.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 6; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.1191597411915040837297383602861500405657730.290.290.210.2100.410.94970.00080.99921.97782993186176812898747877047244435223465500242400760.250.280.220.2400.470.91880.12380.88691.960442221223244425139920457721534723003309013560.290.230.230.2600.480.86240.31920.74551.9354044513435002179306074834196200159338900.270.310.20.2200.420.89260.18560.83911.933303341743307531982256852690701176490.280.250.230.2400.470.87310.26890.78271.949026888027921518344019058509221200.280.30.20.2100.410.90390.13630.88191.9562028265467588810691365039970.170.220.270.3400.610.88250.2650.77651.94660000000000NANANANANANANANANANA06896852926924220639676845660459746695557459582885242235941334901467259264983486691433246477751128774411027344919301263044475462732583285615746674341459135495493616623908538499949823667405968803823399817142590311851384809616316312533267815745715214543911766
GCF_013377495.2NC_066368NC_066368.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 7; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.1120281311010420802296678776031000381148020.290.290.210.2100.420.95170.01780.98241.982843025866405937706291845287585029571500230276840.260.280.220.2400.460.92150.11620.89231.963425541923725649324483719892921993723274708964500.280.230.230.2600.490.86390.31320.74841.93604790009538133832768313676571500171252490.260.30.210.2300.440.89130.19520.83161.936103936753007130039246572573901105060.270.250.230.2500.480.8730.24830.79471.9568121291122575915159716154807518150.270.310.20.2200.420.89840.18130.84551.95530011141723280820.170.210.280.3400.620.89870.19480.82251.94980000000000NANANANANANANANANANA06702827225334162621780095734419545155884463579384907263937514971452161904988453393542727504950418830448127684590296559114583447534003105570248964269502537026003620327368319522951273440429565133691380818273010270651334922568314532972311415035381197042621749
GCF_013377495.2NC_066369NC_066369.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 8; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.96354409500819699124969058850330333930.290.290.210.2100.420.94980.01320.98691.981729929159052449075806785383762242480290191373430.260.280.220.2400.460.92190.11810.89071.96547635123724648324185719594121640622811708823210.280.230.240.2600.490.86350.30730.75221.9374037889964279760273861830446410138520150.260.310.210.2300.430.89090.19650.83071.93740552782245932420918825198320874590.280.260.220.2400.470.87140.24140.79881.9524018900319678512606012929506411430.270.310.20.2100.410.89580.17770.84751.944102022536374601440.170.240.250.3300.580.84810.28940.75111.96280000000000NANANANANANANANANANA06779818924984045616774085642412445325797428375594820255939184796440060424972440192842792508846139051444627184438283158984519447132743160578447204353474535405619644224787792487149693411417565813525390416982969282948844876574014562922293016235702203744451971
GCF_013377495.2NC_066370NC_066370.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 9; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.7676341760863357537495697790500267370130.290.280.220.2100.430.95120.00930.99071.985130223253437496804170158285533931600700139352470.250.270.230.2500.480.91780.11490.89341.96775689821519741218638415575317576818153006994350.270.230.240.2600.50.86320.30980.75061.937602666000302292119791342201730098697850.250.30.210.2300.450.88850.20120.8271.93350342357194401914216940172150727370.260.250.240.2500.490.87640.2260.80881.961901302571357089832910119304654870.270.30.210.2200.430.90250.14040.87551.965500222933384701470.20.220.260.3200.580.87780.20410.82061.969504004088096014011522047630.180.20.290.3200.610.88090.08490.91861.961105195618818873192470461554460318437574485335558653930221628283968351448534171368374172279402038127052372719863581216446573791345327382285441639353439393329824919484621365772403241642669343148602834304716622402204541753714466910882409240912194177141631601375
GCF_013377495.2NC_066371NC_066371.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 10; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.63492686365761487667648794870224711920.280.280.220.2200.430.95280.00160.99841.987518520639139574764410824299591233306250146948370.240.260.240.2600.50.91720.120.88941.9547227615717132816512913448516600717415306397740.270.220.250.2700.520.86080.31350.74841.9301028600933240098211199723625980105747860.240.280.230.2500.480.88340.21490.81781.92360212849214172088118776197310808050.270.240.240.2500.490.86670.25190.79171.9539018951120756814628515986707032310.270.30.20.2300.430.89960.17180.85031.95560011171721280830.20.20.250.3400.590.8870.14290.8751.967600112224353801190.180.20.290.3200.610.88090.08460.91891.96130453359181525274343106303407726253459404827745040328321482442360528664720359328437208188935423229672434781710294018494249354628692646178237283890331641512809487447692518483945064041216136284129248324771479265517073486357440088782640275612163479114627711453
GCF_013377495.2NC_066372NC_066372.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 11; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.62965616275535477311447582541000221044640.280.280.220.2200.430.95110.00320.99681.98632142374513755937415380528038033112437500138264820.250.270.230.2500.480.91980.12140.88851.9647701218419838220718316639218559119772807568940.280.220.230.2600.50.86270.31610.74711.933302683722303273519402692167555098242810.260.30.210.2300.440.88750.20040.8281.93050222345205692005416089161900729020.270.250.230.2500.480.86570.25620.79091.9404017283918558111627712496205996590.270.310.20.2300.420.89470.21090.82761.93870291116217320825307960.20.220.260.3200.580.8920.25680.77671.96360000000000NANANANANANANANANANA05630705321543484521972804739344840704883372069524218218132754292401252174196360780202309409642817590383221643749242848914091360428072472467445213642404630714973549522416803438542462880354453973084332216542734232840953993473911862584246213664692163736151611
GCF_013377495.2NC_066373NC_066373.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 12; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.6326530629982946374194609872500218741500.290.290.210.2100.420.9520.00510.99491.982720622743329223693238494224605924794280108863500.240.260.240.2600.50.91480.12770.8831.9589186917918136015964913265216566717059306285610.260.220.250.2700.520.86120.2980.75871.932902010748227715714926251665514074460440.230.280.230.2500.480.88180.22180.81251.92520133245128081223710664117380474470.270.240.230.2600.480.86180.27670.77561.9441018790720491412822413651406575590.270.310.20.2200.420.89980.1710.85181.951109817220293337396012460.180.240.270.3200.590.88970.22550.8011.96490000000000NANANANANANANANANANA0458956041568275942456400416824773531386225854744325819602451353329964658363328347321190838033158658533101631280016103924338527802516177636993915335942152631509548832399438543413887215733513921243426381541277215853520359239598382633259312203460106126641309
GCF_013377495.2NC_066374NC_066374.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 13; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.6101243610693645618874567655500213382210.290.290.210.2100.430.95120.00110.99891.9849172202374264400329369812064276228385250099296120.240.270.240.2500.490.91910.12390.88631.9681014516931413832511155913277913844505211080.280.220.240.2700.510.86120.32710.73991.9330182224620705471397759156488750068559390.250.30.220.2400.460.88940.20230.82621.93840212142143811416412116126320532930.270.240.230.2600.490.86740.29060.76541.94580139912145225946869710604769290.260.30.210.2300.450.89510.20250.83031.95401233958597302290.180.250.260.3200.580.87030.36840.70031.95220000000000NANANANANANANANANANA038234970130922713554493131872172300132822361428027831640213029522645364729652419568416513121285455692760136625701439353529052366208415023179297626593132207236283926171142223204308918072681370719521968118819271445298430323628727188419509472917100024331116
GCF_013377495.2NC_066375NC_066375.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 14; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.55929695562008452987445074520201923030.280.280.220.2200.450.95240.00530.99481.99220519940427668533083517226511625133370106288230.230.260.240.2700.510.91790.12740.88361.963466517517034514441111781315521016433505817690.270.210.250.2700.520.85980.33630.73441.928801953835222416715670081749231074942410.240.280.230.2500.480.8860.2150.81741.93640201939136981328812150131560522920.260.240.230.2700.50.86750.26370.78441.95120111738119374813788636603988560.250.30.210.2400.450.89530.23760.80451.95070101202116170740.270.280.220.2300.450.89870.05470.94681.9910000000000NANANANANANANANANANA038615181120922503755662735481977342435712233422228162150208934242675539833102342717017243578290159503151146725251427356531472365233613913217430829274006245546104850235039494219346017783367365619511984188733921249311333453680672262426741090291986123891225
GCF_013377495.2NC_066376NC_066376.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 15; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.5058020491633541186494024848500181183520.280.270.230.2200.450.95240.02570.97461.992522222744933355913669377266024429101440125753560.240.260.240.2600.50.91820.12160.8881.96481141118620238818832015801518786119378107279770.260.220.250.2600.510.86290.29640.75961.937502120869242711516932561893769081350090.240.290.220.2500.470.88550.21180.81911.93120221032174031606713263133770601100.270.230.240.2600.50.86830.27170.77551.9441014651015567010462611258805193940.260.290.220.2400.450.89660.17680.84771.94910325628310413103800.160.220.270.3400.620.87950.25610.78091.9430000000000NANANANANANANANANANA05018635617023122487969294700300041154981305157403768205627663992375349824411349483572176463035727686378720803348201349533902349928672000413242553718446731155279544526265574456644152698367652163023306117062740195241513945464010402914284313774306154836461545
GCF_013377495.2NC_066377NC_066377.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 16; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.4377958440529837362453759010500162790110.270.270.230.2300.460.95010.00610.99391.99551802013812247642248700919216762112155087684820.230.260.250.2700.510.91680.120.88951.9647015517733214560611535414807515213805611730.260.210.250.2700.530.85930.32120.74361.93201553538176996613055121451392060804080.230.280.230.2500.490.88480.21050.82051.93770181634123801192710813109560460760.260.230.250.2600.510.86510.26850.77991.94106226265200478265020802254960.260.290.220.2400.450.90150.16280.85921.962401344271829302880.150.250.280.3200.610.87720.3240.73871.94160000000000NANANANANANANANANANA038605264131523323966573936062014335135822247439429411837222730572633399730252367645816283537274858523102154223911381384029732453222515483502341029303846214642994440198541903660348418233030395120512243142922211315327534473826641226222851036320494525291251
GCF_013377495.2NC_066378NC_066378.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 17; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.4239451425774035539313577731500156293530.270.270.230.2300.460.94850.00550.99451.99452131984112510127282150620582652292683096825810.240.260.240.2600.50.9170.12250.88711.967966717417434816544613387116270217160706336260.270.220.250.2700.520.86110.3150.74731.934901843221212910314667641652713070918010.240.290.220.2500.470.88560.21930.81361.93470241236124041176410529107270454240.260.240.240.2700.510.87080.24410.79621.955708155083756671137022103026400.250.290.220.2300.450.89850.22180.81511.959704268410111113804340.190.230.260.3200.570.88480.21930.80721.96620000000000NANANANANANANANANANA0452359201554265244556500410226153498408426085251311518772466345030784354346728397280199938873363690532981786297217514272346329852515172036373671314239212470466349762268494740033735224933144366240726241406248015893548357941138482683241411933601116629041465
GCF_013377495.2NC_066379NC_066379.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 18; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.3463839350316530939183118066500131794880.260.270.230.2400.470.94840.00950.99051.99761871703572164550241304018951452078075085508100.230.250.250.2700.520.91410.12440.88611.96364138815314429714122911287514527615254505519250.260.210.250.2800.530.85990.32510.73971.932301423205163345412078321333476055979670.230.280.240.2500.490.88110.22530.80941.93080161935116171121410993114690452930.250.240.250.2600.510.87120.24850.79341.95308834099615869979582803707800.250.280.220.2400.470.89610.19430.83351.96401021216719822228408710.190.230.250.3300.580.88410.24710.78651.95780000000000NANANANANANANANANANA037305513117321163832627737632020312335301989448127301743187930622570408932462331693015783583279060343004133723341422366531082411233313283110354528813527232044274324214240283783337516852988360318432191130122581197298831973416639242620661098302084523481327
GCF_013377495.2NC_066380NC_066380.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 19; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.3145675311116629494302917750500121245210.260.260.240.2400.480.9510.01090.98911.99921441863302061429231466219340382115806084259350.230.250.250.2700.520.91810.11620.89271.97284745312515127613013410468113601914146705123010.260.20.260.2800.540.860.3170.74651.931401418173164362413018151442580058061920.230.280.230.2600.490.88580.21610.81591.943201425391068399529660103410406360.260.220.250.2700.520.86230.25490.79161.9467214925649106424254191001826970.250.290.230.2400.470.89550.20480.83061.957100223336334401460.220.250.220.300.530.82050.20460.81941.98770000000000NANANANANANANANANANA035174687108421473815505134691759298133731958393826381798198826712564361627361926603518573164268457572891130521821188371326102363201411483086301026193391200938463915179536103366319516423042340018691981120620851093327630903556589216121671028291373423171231
GCF_013377495.2NC_066381NC_066381.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 20; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.32322073210983284355528172951000121050400.270.270.230.2300.470.94960.00790.99211.99691901653552152553244564718639222068029085301510.230.260.240.2600.510.91730.12310.88651.968989915513929412982810659113116913761005051980.260.220.250.2700.520.86130.31750.74581.934901726364200350014549191629065068138480.240.290.220.2500.470.88670.21340.81781.93890211839117171146011394116570462280.240.240.240.2800.520.86840.26320.77981.946602579829491223322437001019910.240.290.230.2500.470.88870.23680.80181.944402134052627102250.180.230.280.3200.590.88460.20370.82331.96410000000000NANANANANANANANANANA034444535126220693565511633061915286433042016404825241592195926632350368927912238610516283173256854172583138222971366345727292402202613052993292326103072192638333885191836753189304517802628343419922133115520561162287928893308681198920011053295590924211245
GCF_013377495.2NC_066382NC_066382.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 21; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.2182984216283320017881993528083411330.260.260.240.2400.480.9520.00670.99331.99871501122621377162155528212502151391495055741540.240.260.250.2600.510.91630.11950.88971.967471134972311006988265311297811632504126540.250.20.260.2800.550.85880.31090.75031.928509483711096496839030940715038246120.230.270.240.2600.50.88090.23810.80151.933201081848744748444746420187110.250.230.260.2600.520.86740.27490.77341.94070174901944515590161510686760.240.290.230.2400.470.890.23420.80731.94910000000000NANANANANANANANANANA0000000000NANANANANANANANANANA026653576856163130474197281613262503284713402890209116101605207619032918218616104929134725341886429523799811698950280421321659162992922612357219429591579358032751838265229222881118624152728153714731162221682024742432285948319982006930211363219071087
GCF_013377495.2NC_066383NC_066383.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 22; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.1991497201040019536571974392150079314460.250.250.250.2500.50.95080.010.991.9998101871881070956121211311119271219800250046172960.220.250.250.2700.530.91780.12270.88681.973210886887711586764255062805147858502818030.250.20.270.2800.550.86140.31890.74521.93320704248816964693889768879029839800.220.270.250.2700.520.88180.23760.80051.93830881667646346590659900250060.260.240.230.2700.50.8740.22960.80551.967703585640248307333453801413750.240.290.220.2600.470.9010.22020.81061.96730101111718260720.150.240.250.3600.610.89870.39610.66971.93640202467443511556019770.230.220.270.2800.550.90790.05150.95011.99120187922375361162218226841951766188419798061704166011971020144313182067150892433128571941113230051857679106751419231477109711115401751162615752258108123992437121215832070183277417621812985103777713044631844174522133191353127264814693351329762
GCF_013377495.2NC_066384NC_066384.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 23; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.189121718725291958138194173450076641180.250.240.260.2500.510.95050.00920.99091.999712413826295557110820619947951097658041300850.210.230.270.2900.550.91050.13310.87871.957117009108118226868566749610162610359003595680.250.190.270.2900.560.85570.34050.73171.91620572293678516569630639224024596630.210.260.250.2800.530.87640.24730.79361.9237012122440303548474447610170830.230.210.270.300.560.86250.23750.80141.93860118061249112706123320493350.220.260.260.2600.520.88720.20350.83411.94650000000000NANANANANANANANANANA0000000000NANANANANANANANANANA0225734726721211247441402323103324472289104424521729140512151817149825962084117641981100233115744174215477212536912401192712601496735187024291910302414683284309216502328300023389392433223211111208114918605961982219625573791823198669916764001386849
GCF_013377495.2NC_066385NC_066385.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 24; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.1676536167668618227451832551070085180.240.240.260.2600.520.95010.00270.99731.99871541322861019006113865911104971196130044642920.220.240.270.2800.550.91180.12290.88761.96198400137117254959357819911478311552804044450.250.20.270.2800.560.8590.32990.73821.92770656250761968691049752802028620690.210.250.260.2800.540.87570.24880.7931.92550671340133860406740770160170.260.230.250.2500.50.8660.24050.80221.944903904140909305013136501418160.260.280.220.2300.460.90390.1390.87551.970402245069769502900.170.240.260.3300.590.88740.27580.77191.95480000000000NANANANANANANANANANA028143742745149027624490276611232635267910832502186916381449228217643222244313625131119127931632433225118831529663258724501394177169721562644218432811625360834571918227629262687108626552408128114431192194068623622481286241721472038822190348716611064
GCF_013377495.2NC_066386NC_066386.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 25; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.1593595156498717090451685526300065561530.240.240.260.2600.520.950.0160.98411.99881601953551047431115709311296321205609100045407650.210.230.280.2900.570.90440.14040.87271.951925989139162301975317942812578412458004273230.240.190.280.2900.580.85580.3280.73971.91690705018808629716684780458030107890.190.240.270.2900.570.86620.26610.7811.90970671348964998458051850196590.230.230.250.2900.540.86980.23390.80051.94230121321417211019121490494720.220.260.240.2800.520.88770.22250.80671.9636031720292321381460014540.20.220.260.3200.580.88430.14680.86651.9750000000000NANANANANANANANANANA026403682659145128954819290611342995271711062535186617831311235118373262249712675358151629691593444628367841336776287625031472189163721632989223040761886422540492234215837853044102329772320132213571396228753524502735289735922362316907187743116361085
GCF_013377495.2NC_066387NC_066387.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 26; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.1388725139036715647951553442200058993290.240.240.270.2600.530.95050.00420.99581.9974165153318977023110779910774791174157043364580.20.220.280.300.570.90690.12870.88241.949401451332781007578104012676512834304369050.240.190.270.2900.570.85530.33070.73941.91810566267676462602217669326025142720.20.250.270.2900.560.86960.25990.7851.911201061648034482478147820188480.260.220.250.2700.520.86580.29790.75931.93810198232037315281162320717090.260.290.210.2300.450.89750.16860.8531.965302245668769202920.190.230.260.3100.580.88060.2080.81851.97060000000000NANANANANANANANANANA02760363279115273147479730281032282631621144264620101896143922311774330022781217557813982917186146942815100014347473005237815631834723218828312423368017114268385723172272370528571085308325831281159112832512638284226682911366241623421052206946417221252
GCF_013377495.2NC_066388NC_066388.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 27; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.1477835147280414208751413227100057857410.260.250.250.2400.490.95150.00440.99561.999610810020877466986224778515185644050032790070.20.220.280.300.570.90320.13680.87571.9438213294871816268951105832908344002805240.230.190.280.2900.580.85280.32210.7441.913135437474507304438107490976018738610.190.240.270.2900.570.86490.28690.76741.90260671327282560274126860107150.250.230.260.2600.520.86530.29780.75881.94560244362544618557200240884630.270.280.210.2400.440.89490.15710.85961.95780000000000NANANANANANANANANANA0000000000NANANANANANANANANANA01611232844285719353131192672617901957701155911351298830145110562186150886936228991827108928611916523899454177515609531140413140619221540271911942874250316651312247320456862080161577194697516943531683184218391991666173466312012891052765
GCF_013377495.2NC_066389NC_066389.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 28; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.569028568451755407756559500026544450.210.210.280.2900.570.94530.00130.99871.984512899227311669350402441300476341150015812120.180.20.30.3200.620.88970.14940.86741.92644320120902106117849659879448690902856900.220.180.30.3100.610.8520.33460.73481.9046018649722819226324129205715009714870.170.220.30.3200.610.85310.31540.74841.87730426763766995959034830.230.220.280.2700.550.87780.26840.77351.956206888518751010034240.220.280.230.2700.50.86960.32060.74311.934400223127394901460.210.180.270.3400.60.8870.28510.7561.95280000000000NANANANANANANANANANA01487238337385920413249205554420091893534141112571414808135212032240140263834309281806110431942046529731402192213679411128302130118981537294811222971272518211130270323846182270145395590498619072931907183520531561956195264712102331025866
GCF_013377495.2NC_066390NC_066390.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 29; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.563278564057771777765955300026680670.210.210.290.2900.580.93510.00450.99551.982210093193329526369327466376499999100016662280.190.190.30.3200.620.89310.14250.87291.92253985841695286242841775727845202517270.220.170.30.3100.610.85130.33450.73491.904401769582120952482872697015009075410.160.210.310.3200.630.84940.31890.74541.870505278308431017964036540.220.220.270.2900.560.86660.30790.74981.9338046815004437946700187340.210.250.270.2800.540.87410.24860.8011.91690101151921270820.180.230.260.3300.590.89870.24260.78361.96810000000000NANANANANANANANANANA01415209929175817473270188844816031779497115296112376341433904210914105763633978160781027451901386649343165715826741162239107218631397253911153113231616328842665181342120441174595647863169017013701476151211216961592545959152838630
GCF_013377495.2NC_066391NC_066391.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 30; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.972819372812886313046010004513320.220.210.290.2900.570.94070.02480.97561.98215203567946773349684810307803452060.190.210.30.3100.60.89280.13650.87721.9458117615173210681830315142153890495150.220.160.30.3200.620.84850.36670.71511.884604073249241537965754502013140.170.220.30.3100.610.85830.32450.74271.8937001122320329227709950.210.240.30.2600.550.85470.19910.82271.9804090699112011234043320.210.230.280.2800.560.90290.05770.94431.98850000000000NANANANANANANANANANA0000000000NANANANANANANANANANA026345469119322557325863062679530016624310422614239631711465020536617452130995130394272751632413718337028347920452244432822251932410542227493159170345453042693332731940413821943182175
GCF_013377495.2NC_066392NC_066392.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 31; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.18821918393621965121465108064570.230.230.270.2700.540.92120.0230.97721.99561515302352625502290242699901050510.190.250.310.2500.550.88590.27330.76851.9701012112334885291641045300197190.180.260.320.2400.560.86430.35530.70571.95720103481046811401111360433530.240.270.250.2400.490.90980.11450.90021.97870000000000NANANANANANANANANANA0000000NANANANANANANANANANA0000000000NANANANANANANANANANA02241526141225213012084710.190.190.290.3200.610.89430.08880.91671.95490184944479197991506223749784959615390101239238230399304514017093223172312167012323381411561941883531294072190130126783510217131336681225052975491291
GCF_013377495.2NC_066393NC_066393.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 32; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.16839616999617645217199906868430.250.250.260.2500.510.91160.01750.98271.999867134220144426414484358001716550.230.240.260.2700.530.90920.09850.90821.95840461039223644422148840166710.260.210.250.2800.530.84740.39030.70061.90180242912558421235213680924780.230.270.250.2500.50.87290.25320.79471.91850000000000NANANANANANANANANANA0000000NANANANANANANANANANA0000000000NANANANANANANANANANA0000000000NANANANANANANANANANA02032003264111162106481191815367744756699315310280230551024019379321133394746966439873901426013211561861001033513711272473147428015910437614816582810321
GCF_013377495.2NC_066394NC_066394.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 33; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.18475119045722865223205410008369140.220.230.270.2800.550.93510.02260.97771.991737549117462617947622497823172110008118010.20.220.270.300.570.89660.15660.86221.963149253055191421521527346281520898550.220.170.290.3200.610.84640.36360.71921.89805231457160599466625802356780.20.240.270.300.570.85440.35510.72411.9150336829674744839030860.290.210.210.2800.490.84960.44120.67461.9154034253592284328390126990.280.30.20.2200.420.88160.23150.80881.9424081826362448514619019430.190.230.260.3200.580.87990.24210.7961.956701014139383601540.270.250.250.2300.480.88090.0520.94931.99840450642613155521062613143664873162386510380355356355687388201112326756223396774689282717163962282866756948560410152291022813481411685769163910648350204309590756277976385658455918627436352224
GCF_013377495.2NC_066395NC_066395.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome 34; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.20561220341122236422128108526680.240.240.260.2600.520.91980.00780.99221.9988232144204782374628519237260964690.20.270.310.2300.530.88360.32590.7271.972602217396816101791188981600370440.20.240.30.2600.560.85140.44180.65371.913509909986012052114250432460.20.220.30.2800.580.86110.26410.7931.91920000000000NANANANANANANANANANA0000000NANANANANANANANANANA0000000000NANANANANANANANANANA0000000000NANANANANANANANANANA0399166611453041812871664921611559014769941841693274944176956283956323195571041399740116520365143242271353304513242821542882482101348621754385437151208120973331479134612
GCF_013377495.2NC_066396NC_066396.1Cygnus atratus isolate AKBS03 ecotype Queensland; Australia chromosome Z; CAtr_DNAZoo_HiC_assembly; whole genome shotgun sequence.2525806625282603169907831699569625000845521480.30.30.20.200.40.94820.00060.99941.9724164388541059053211627487707051277559740370445050.270.30.210.2200.430.92340.11280.89651.962823398330355685373900306816294562321140012964180.290.240.220.2500.470.86450.30780.75161.9391077696858654616509947356134710271372450.280.330.190.2100.390.89650.17310.84851.9362068581265362251887377283923801824750.280.260.220.2400.460.86690.26770.78211.93740384483402624263130267616013178530.280.320.20.200.40.89850.1690.85731.9423026811413715819506040.190.230.260.3200.580.89180.22790.79831.96540000000000NANANANANANANANANANA0105931219641456688869511067774071456242793175551286678192676632872767088852272627642128194092666282831274756704192750049758613646269804767519491036655598854285382723883502772131696230686158434982101096001614922643169485066356392789224923196314220078691347867332235
NANC_012843NC_012843.1Cygnus atratus mitochondrion; complete genome.49443718545226340167480.30.220.330.1600.480.93120.490.61761.94842893744153631481926680155330.290.260.260.1900.450.88460.43070.66561.93472191102174198326661376081990.260.250.320.1700.50.88310.54790.60671.91510100001100000NA1000000000000NANANANANANANANANANA0000000NANANANANANANANANANA014822464420334326015440.30.270.220.2100.430.87840.36060.70281.94371202858516689525025880.330.20.270.200.470.91070.38210.68281.9675041106023541329445514125866668222361274778149410169620611137614838468074455965641413214504718293416812152819280212614955925