GBRAP

Genome-Based Retrieval and Analysis Parser


Bird : Melospiza_melodia_melodia
Assembly Assembly Locus_ID Locus_ID Version Version Definition Sequence description bp_chromo_A Total number of 'A' nucleotides in the whole sequence bp_chromo_T Total number of 'T' nucleotides in the whole sequence bp_chromo_C Total number of 'C' nucleotides in the whole sequence bp_chromo_G Total number of 'G' nucleotides in the whole sequence bp_chromo_N Total number of 'N' nucleotides in the whole sequence bp_chromo_tot Total number of nucleotides in the whole sequence fr_chromo_A Frequency of 'A' nucleotides in the whole sequence fr_chromo_T Frequency of 'T' nucleotides in the whole sequence fr_chromo_C Frequency of 'C' nucleotides in the whole sequence fr_chromo_G Frequency of 'G' nucleotides in the whole sequence fr_chromo_N Frequency of 'N' nucleotides in the whole sequence GC_chromo Percentage of ā€˜G’ + ā€˜C’ nucleotides in the whole sequence topo_entropy_chromo Topological entropy of the whole sequence chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee shannon_chromo Shannon entropy of the whole sequence n_gene_pos Number of genes in the positive strand n_gene_neg Number of genes in the negative strand n_gene_tot Total number of genes in the chromosome bp_gene_A Number of 'A' bases in total genes bp_gene_T Number of 'T' bases in total genes bp_gene_C Number of 'C' bases in total genes bp_gene_G Number of 'G' bases in total genes bp_gene_N Number of 'N' bases in total genes bp_gene_tot Total number of bases in total genes fr_gene_A Frequency of 'A' bases among total gene bases fr_gene_T Frequency of 'T' bases among total gene bases fr_gene_C Frequency of 'C' bases among total gene bases fr_gene_G Frequency of 'G' bases among total gene bases fr_gene_N Frequency of 'N' bases among total gene bases GC_gene Percentage of 'G' and 'C' bases in total genes topo_entropy_gene Topological entropy calculated from total gene sequences chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes shannon_gene Shannon entropy score for total genes bp_gene_overlap_tot Number of bases overlapping between genes on two strands n_cds_pos Number of CDS in the positive strand n_cds_neg Number of CDS in the negative strand n_cds_tot Total number of CDS in the chromosome bp_cds_A Number of 'A' bases in total CDS (coding sequences) bp_cds_T Number of 'T' bases in total CDS bp_cds_C Number of 'C' bases in total CDS bp_cds_G Number of 'G' bases in total CDS bp_cds_N Number of 'N' bases in total CDS bp_cds_tot Total bases in total CDS fr_cds_A Frequency of 'A' bases among total CDS bases fr_cds_T Frequency of 'T' bases among total CDS bases fr_cds_C Frequency of 'C' bases among total CDS bases fr_cds_G Frequency of 'G' bases among total CDS bases fr_cds_N Frequency of 'N' bases among total CDS bases GC_cds Percentage of 'G' and 'C' bases in total CDS topo_entropy_cds Topological entropy calculated from total CDS sequences chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS shannon_cds Shannon entropy score for total CDS bp_cds_overlap_tot Number of bases overlapping between CDS on two strands bp_cds_intron_A Number of 'A' bases in total introns between CDS bp_cds_intron_T Number of 'T' bases in total introns between CDS bp_cds_intron_C Number of 'C' bases in total introns between CDS bp_cds_intron_G Number of 'G' bases in total introns between CDS bp_cds_intron_N Number of 'N' bases in total introns between CDS bp_cds_intron_tot Total bases in total introns between CDS fr_cds_intron_A Frequency of 'A' bases in total introns between CDS fr_cds_intron_T Frequency of 'T' bases in total introns between CDS fr_cds_intron_C Frequency of 'C' bases in total introns between CDS fr_cds_intron_G Frequency of 'G' bases in total introns between CDS fr_cds_intron_N Frequency of 'N' bases in total introns between CDS GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS shannon_cds_intron Shannon entropy score for total introns between CDS bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands n_ncRNA_pos Number of ncRNA in the positive strand n_ncRNA_neg Number of ncRNA in the negative strand n_ncRNA_tot Total number of ncRNA in the chromosome bp_ncRNA_A Number of 'A' bases in total ncRNA bp_ncRNA_T bp_ncRNA_T bp_ncRNA_C Number of 'C' bases in total ncRNA bp_ncRNA_G Number of 'G' bases in total ncRNA bp_ncRNA_N Number of 'N' bases in total ncRNA bp_ncRNA_tot Total bases in total ncRNA fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA shannon_ncRNA Shannon entropy score for total ncRNA bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands bp_nc_intron_A Number of 'A' bases in total introns between ncRNA bp_nc_intron_T Number of 'T' bases in total introns between ncRNA bp_nc_intron_C Number of 'C' bases in total introns between ncRNA bp_nc_intron_G Number of 'G' bases in total introns between ncRNA bp_nc_intron_N Number of 'N' bases in total introns between ncRNA bp_nc_intron_tot Total bases in total introns between ncRNA fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA shannon_nc_intron Shannon entropy score for total introns between ncRNA bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands n_tRNA_pos Number of tRNA in the positive strand n_tRNA_neg Number of tRNA in the negative strand n_tRNA_tot Total number of tRNA in the chromosome bp_tRNA_A Number of 'A' bases in total tRNA bp_tRNA_T Number of 'T' bases in total tRNA bp_tRNA_C Number of 'C' bases in total tRNA bp_tRNA_G Number of 'G' bases in total tRNA bp_tRNA_N Number of 'N' bases in total tRNA bp_tRNA_tot Total bases in total tRNA fr_tRNA_A Frequency of 'A' bases among total tRNA bases fr_tRNA_T Frequency of 'T' bases among total tRNA bases fr_tRNA_C Frequency of 'C' bases among total tRNA bases fr_tRNA_G Frequency of 'G' bases among total tRNA bases fr_tRNA_N Frequency of 'N' bases among total tRNA bases GC_tRNA Percentage of 'G' and 'C' bases in total tRNA topo_entropy_tRNA Topological entropy calculated from total tRNA sequences chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA shannon_tRNA Shannon entropy score for total tRNA bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands n_rRNA_pos Number of rRNA in the positive strand n_rRNA_neg Number of rRNA in the negative strand n_rRNA_tot Total number of rRNA in the chromosome bp_rRNA_A Number of 'A' bases in total rRNA bp_rRNA_T Number of 'T' bases in total rRNA bp_rRNA_C Number of 'C' bases in total rRNA bp_rRNA_G Number of 'G' bases in total rRNA bp_rRNA_N Number of 'N' bases in total rRNA bp_rRNA_tot Total bases in total rRNA fr_rRNA_A Frequency of 'A' bases among total rRNA bases fr_rRNA_T Frequency of 'T' bases among total rRNA bases fr_rRNA_C Frequency of 'C' bases among total rRNA bases fr_rRNA_G Frequency of 'G' bases among total rRNA bases fr_rRNA_N Frequency of 'N' bases among total rRNA bases GC_rRNA Percentage of 'G' and 'C' bases in total rRNA topo_entropy_rRNA Topological entropy calculated from total rRNA sequences chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA shannon_rRNA Shannon entropy score for total rRNA bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands ATG ATG AAG AAG GTA GTA ACT ACT GCA GCA GAG GAG GCT GCT ATT ATT TCC TCC TGG TGG AAT AAT GAA GAA TCA TCA ACG ACG AGT AGT AAC AAC TCT TCT GTG GTG TTC TTC TTT TTT CTG CTG GGT GGT CTC CTC GAT GAT CAG CAG ACC ACC CTA CTA TTG TTG TAT TAT GGA GGA ATC ATC CTT CTT GTC GTC ATA ATA ACA ACA GAC GAC CAC CAC CCC CCC TAC TAC GCC GCC AGC AGC CGC CGC AAA AAA GGC GGC TGC TGC GTT GTT GGG GGG AGA AGA TGT TGT CAT CAT TCG TCG GCG GCG TTA TTA CCT CCT AGG AGG CCA CCA TAG TAG CGG CGG CCG CCG CGT CGT CAA CAA TAA TAA TGA TGA CGA CGA
GCF_035770615.1NC_086194NC_086194.1Melospiza melodia melodia isolate bMelMel2 chromosome 1; bMelMel2.pri; whole genome shotgun sequence.51461542512692413610464136018900166571748709810.290.290.210.2100.410.94280.00310.99691.97778008691669226519962496848015001991165387601200791624270.270.290.210.2300.440.91780.12140.8891.9654557526446941338704015574954610830654417025442160.290.240.230.2500.480.86130.31520.74741.9385016643202186663261079028111980799800580814080.280.330.190.2100.40.89250.18230.84191.93720130128258128810124340917579585004407570.290.250.220.2400.470.86780.27170.77861.9452012015531244504805698830436040821910.280.310.20.2100.410.89980.14430.87451.95030142640609675712952029480.210.230.240.3200.560.87170.23510.80151.96910000000000NANANANANANANANANANA020007240866607120511754124096160241309513960157711360222792143205576111471394412878183491448914357277297896140881451126873120706780135348300172121329612669927186191727413778126361315897261632717987682224006142491377810141116111856311155110334370721180801402614511166283699733570983685155445470123384098
GCF_035770615.1NC_086195NC_086195.1Melospiza melodia melodia isolate bMelMel2 chromosome 2; bMelMel2.pri; whole genome shotgun sequence.41382743412939943073721130595818250421440348080.290.290.210.2100.430.93150.00340.99661.98469070413941692608518623392114622861258037623403596155420.270.290.210.2300.440.91950.11460.8941.9703757475575791136569788469987504992534127720789010.280.230.230.2500.480.86150.31170.74961.9398012002317134500577883401871556123396420747320.270.320.190.2100.410.89250.18710.83761.94330107102209102810101672771898003703617080.270.250.230.2500.470.86820.25280.79091.95380948499977749638593660225032250660.280.30.20.2100.420.89790.1510.86961.954808917218288326426012580.170.230.260.3400.60.88880.27960.76061.95290000000000NANANANANANANANANANA016338193775089963614342188661304010131115051428010691176241198148459193110901066314931119291114223418607111948113832226410158568511558654713662108281057973876828140411088610335112407936131531505954051925611331121857766948415479934889663502561962261191811963141893267580957843039127014457107593249
GCF_035770615.1NC_086196NC_086196.1Melospiza melodia melodia isolate bMelMel2 chromosome 3; bMelMel2.pri; whole genome shotgun sequence.40300630402837003003240229965953164421405991270.290.290.210.2100.430.94650.00130.99871.9844710712142217145805190171221157784012833528600605748950.270.290.210.2300.440.91820.12270.8881.9694119475755771152633029520223554403597624023052790.280.230.230.2600.480.86150.30970.75111.93990125402811415416981987979154913600440487600.270.320.190.2200.410.89070.19140.83431.938901201052258767285877688337106003134420.270.250.230.2500.480.86530.2780.77431.94850953109991492665230689663032994940.280.310.20.2100.420.89770.14930.87171.95590581318820926631409770.190.210.270.3200.590.88210.1980.82561.96360000000000NANANANANANANANANANA01772421776577210498157872243514818114571245715238117592073912650492699661248311951165981303012699262086927131981393124486108246157126967193157851177711787817075751496212658115361171888201497416635621121571129041314291931021316986991298753674656669331304412968148423234657963213496140294847113243860
GCF_035770615.1NC_086197NC_086197.1Melospiza melodia melodia isolate bMelMel2 chromosome 4; bMelMel2.pri; whole genome shotgun sequence.277238642765345921548574214602082000983881050.280.280.220.2200.440.93370.00330.99671.98865505421092122037771345327584764899297410200434311510.260.280.220.2300.450.91710.12250.88821.96918362472460932442318361292403234426007016328510.280.230.230.2600.490.86060.31550.74691.938808572336960240758134516409172200303975660.270.320.20.2200.420.89010.18850.83741.9428069681375426552881398824089001879180.280.250.230.2400.470.86590.26910.78141.95020668394701826455230475899023013490.280.310.20.2100.410.89930.14990.87161.9544014562799812203610.170.220.270.3400.610.88420.23020.79721.95390000000000NANANANANANANANANANA0125731558539527295113451617810500768989591069183171414990153816685490528227123339452851518910479895719235175688240425383204958111228720777160334997106488999853191796505112581159949971408894689355593576411171869507026267546184557928091911095021434823455924909760300777632693
GCF_035770615.1NC_086198NC_086198.1Melospiza melodia melodia isolate bMelMel2 chromosome 5; bMelMel2.pri; whole genome shotgun sequence.27704072274899422110995920902147107130973132500.280.280.220.2100.430.93530.00880.99121.98614474849311058746611756168721807580278634745375943170.270.290.210.2300.440.91880.12120.88831.96819966380375755388029317686354615377142014374720.280.230.230.2600.490.8610.31170.74971.93691187285912826922048683315474311600258983740.270.320.190.2200.410.88940.19860.82931.9394061971585361853114389464300801886860.280.250.220.2500.470.86480.2880.76661.94730634461660006444274469411022081520.280.30.20.2100.420.89840.14850.87011.9548010181722250720.110.240.310.3500.650.84070.42380.67531.89640000000000NANANANANANANANANANA01036813059351265971018813402942067478111962270901228979893408617875817087107197808757315995435082318052152177073357474234211100287204692050414485954978327298827351739921103654131127398428852053166947105886562611125204364417183838408971920534576445322088708296873732471
GCF_035770615.1NC_086199NC_086199.1Melospiza melodia melodia isolate bMelMel2 chromosome 6; bMelMel2.pri; whole genome shotgun sequence.218290062170307916929231169904358510774602610.280.280.220.2200.440.94030.00470.99531.98885985511149996143011131876712982679121365882361411500.250.280.230.2400.470.91560.12990.88141.969440096491450941468567382218454619471438017768420.270.220.240.2600.50.85980.32040.7441.9379070324648019303487018454573145882253851470.260.310.20.2300.430.88670.20640.82331.9414081901717989480012599196439002842150.280.250.230.2500.470.86750.28260.77061.94760631619665342433673456070021867040.280.310.20.2100.410.8940.17950.84691.949703368010111615004470.180.230.260.3400.60.88820.26650.76681.95820000000000NANANANANANANANANANA013017160723970786912561185461186874331059611655804814860944742517312907387381354410009824721775495411528101291958789624520845447431209994738198673548001107410104932811214659112924131435453147651057810473608188341224573917338318253854421108261068413139211158635367280010415300082593244
GCF_035770615.1NC_086200NC_086200.1Melospiza melodia melodia isolate bMelMel2 chromosome 7; bMelMel2.pri; whole genome shotgun sequence.7997745776279979113368091314613317638070.250.240.250.2500.50.87440.02620.97421.9998243200443115017312892881274106137546921350892490.210.240.280.2700.550.89460.16890.85171.96391361851613461056298772815338515014504968870.230.180.290.300.590.84990.32970.73851.911606456997649316938667655291328700380.20.250.260.2800.550.85580.29350.7631.92530341448135531321911049115090493300.280.240.230.2500.490.86520.30220.75641.939805834063914545245661402333920.260.310.20.2200.420.88530.20850.82731.9434032567849611603630.180.230.260.3200.580.88190.22160.80691.96550000000000NANANANANANANANANANA02888369756114473725567337709873792358210522375217820561490240916294210274913837375147136551827544033587171231623358529921335180642324273166308953331821572245932751200247083466100539012546162615661458282542833403576348318730003017998200828418241149
GCF_035770615.1NC_086201NC_086201.1Melospiza melodia melodia isolate bMelMel2 chromosome 8; bMelMel2.pri; whole genome shotgun sequence.1170122211704734869409787331090408331620.290.290.210.2100.430.94460.00240.99761.984530729660364463257147930459177050896100232756350.260.290.220.2400.460.91910.1140.89451.969348247237484311101251608279768298341011408180.280.220.240.2600.50.8610.31260.74911.9409046047665211941319880635696370165851500.270.320.20.2200.420.8870.19890.82911.9404644903323932163252382583201164720.280.250.220.2400.470.86750.27260.77961.95010349703360221235636240410011859700.280.310.20.2100.410.89640.15710.86411.9469071017225283325422012550.180.230.260.3400.60.88880.2630.77331.95660000000000NANANANANANANANANANA092771143827615083850210607723152436251767753329040687526485013603255308731596655511351437526623603512439567129526660317977735772518839743681782158796059641542587609843229429900630866263956544885424620474019263055362066226975829217803066314516466748254058991674
GCF_035770615.1NC_086202NC_086202.1Melospiza melodia melodia isolate bMelMel2 chromosome 9; bMelMel2.pri; whole genome shotgun sequence.106679481070756380453598123801324375449950.280.290.210.2200.430.94430.00670.99331.98613163026186220887694727045855655103338324228573840.250.280.220.2400.470.91620.12180.88821.971180326526052525247920503524510725760509602260.270.220.240.2700.510.86010.31150.74971.938604551972517994432638543666612311166626930.260.310.210.2300.440.88680.20140.82671.945904333763072032339256662721701159420.260.250.230.2500.480.86370.29870.75971.94730282074296568207119217273010030340.260.310.20.2300.430.89290.19340.83791.951302022334455201540.150.220.290.3400.630.88670.2730.77281.93370000000000NANANANANANANANANANA0712485832104417171519469644640415365682642867548516924093951506245517324521943791142328385884514610303494423944594255666845017427434932568609451855198612235127070731029887960600360003147508067464088395315753076237359706016693412053192307315245471172548261673
GCF_035770615.1NC_086203NC_086203.1Melospiza melodia melodia isolate bMelMel2 chromosome 10; bMelMel2.pri; whole genome shotgun sequence.8428138838398673559727353211413315217200.270.270.230.2300.470.91240.00280.99721.9968184199383356844740143662847634315697113135874310.240.270.240.2500.490.91430.12360.88661.973118616016432415500412628217223517690006304210.250.210.260.2800.540.85740.31420.74811.934026033782979977201082322480121398422030.230.280.230.2500.480.87790.22560.80961.94390223052181691793116369172580697270.270.230.240.2600.50.86430.28180.77451.94150109415114939884739515204079790.270.280.220.2400.460.8950.15170.86781.96950101171820280830.20.220.240.3400.580.8870.19520.82941.97030000000000NANANANANANANANANANA043905680106725074600691242862238382143242270416531541928226333942668543935052402825417813935311771473973124925311384431237112312251312083788397336904754261954885215255439264713426018023877379524342314127622541166372239844505582251825071015299079228191217
GCF_035770615.1NC_086204NC_086204.1Melospiza melodia melodia isolate bMelMel2 chromosome 11; bMelMel2.pri; whole genome shotgun sequence.9102268905718369407616904951754320059170.280.280.220.2200.430.94330.00510.99491.98683082996075387995600512840357584453195554198826300.260.280.220.2400.460.91810.12140.88841.97331188924724949624034119371123855324856809211730.270.220.250.2700.510.85840.31240.74871.937303721807425400327707393079327554138264300.260.310.210.2300.440.88530.20580.82331.946405544993863539083298093203401395610.280.260.220.2400.460.86430.27730.77291.95320571995602202372106394866019411690.280.310.190.2100.40.89860.15520.8661.951202133852607602260.170.230.260.3400.60.85780.2760.76071.95370000000000NANANANANANANANANANA0657580451952398766958647636437425338645239457053502525563898463243727040484341261086129405600462910478496220844094240165634673398132632404602150095009603833946997740428637315592059233063498065763792366516593029224657595999664310123078314414995501150244331695
GCF_035770615.1NC_086205NC_086205.1Melospiza melodia melodia isolate bMelMel2 chromosome 12; bMelMel2.pri; whole genome shotgun sequence.79480067789214644916863415137972285358730.280.270.230.2200.450.93980.01850.98171.992128029657641730434645769324440735798700156430890.250.270.230.2500.490.91290.12330.8871.9761459923821645419577216230920844521280207793280.260.210.250.2700.520.85950.30970.7511.938602656175302818020321762259481099760120.250.30.220.2400.450.88250.21110.81981.948903240722874328603226482390301038970.280.250.230.2500.480.86680.26030.78531.95590466081499743323729349756016393090.280.30.20.2200.420.89820.14610.87421.959707714233250245321010490.220.240.230.3100.540.8710.25250.77981.975600303072066210191169035700.20.190.290.3300.610.88170.11060.89561.960305608648714723408578878205345291048105378313755024179232329784165366162184349345510050242748444002875646511582346317945515426730882953174649524526438153672921638661772620527052475142243744815167316131231547255315515123490958197662813271911304037108835391322
GCF_035770615.1NC_086206NC_086206.1Melospiza melodia melodia isolate bMelMel2 chromosome 13; bMelMel2.pri; whole genome shotgun sequence.64111946413636514871251488070231223490.280.280.220.2200.450.94120.00020.99981.991424822847631664653518879257732428254110120880790.240.260.240.2600.490.91290.11680.89221.9724448819417737116489713737718814419108306815010.250.210.260.2800.540.85780.29450.76121.936902010356229825615991521780541076883050.230.280.230.2600.490.8760.23130.80521.942904041813434434792257792790901228240.270.250.230.2500.480.86370.26630.78141.94910496252528032365533386009017758260.280.30.210.2200.420.90.13280.88211.960109514177236280338010310.170.230.270.3300.60.88750.24060.7881.95760000000000NANANANANANANANANANA046495964119727554908746046712311435445262306444434241956250535733035579639232673897019834318316078123981127827221328468037462624257713974090417839105430254960005692268540035038464720934004424527842575150627441219441344784967587272629501158327382630941100
GCF_035770615.1NC_086207NC_086207.1Melospiza melodia melodia isolate bMelMel2 chromosome 14; bMelMel2.pri; whole genome shotgun sequence.5669083555682350158874788885600210312780.270.260.240.2300.470.93930.03320.96751.996518923342227859603110977239378326642410109549610.240.260.240.2600.50.91420.11580.89281.975733516221137315113512426518188419404706513310.260.20.260.2800.540.85580.33260.73671.930501925939219928316006961795628075215460.230.280.230.2600.490.87950.22010.81321.950251338199991942217134174850740400.260.240.250.2500.50.86910.24740.79441.9555013806315130611370612230905253840.260.290.220.2400.460.8970.16030.86061.970000000000NANANANANANANANANANA0000000000NANANANANANANANANANA03918535396622724254831240851947401344152169394830712501217336692779696035482170942517244037309570793583107624441203395533712141251210903544498133355043267661895864329036265346405716044058376522172002230544481000357543404248485329333471082279260625571182
GCF_035770615.1NC_086208NC_086208.1Melospiza melodia melodia isolate bMelMel2 chromosome 15; bMelMel2.pri; whole genome shotgun sequence.58147995851891463892446567130209623270.280.280.220.2200.440.94450.00510.99491.990725122247335584743979773283706431441290135194400.250.270.230.2500.480.91430.12660.88411.97221440120018938919976515811020207421283007727790.260.210.250.2700.520.85730.32050.74421.931202429618279031918806452111731092123130.250.30.220.2400.460.880.22120.81291.942304424683120330997254942631501140090.270.240.240.2500.490.8680.24690.79541.9543026513528603621397022368409888250.270.30.210.2200.430.89470.17940.84831.9572044811013015318705800.190.220.260.3200.590.89630.24030.78871.96220000000000NANANANANANANANANANA0538269831462322358498542522530034685541031436267415021363151404836886066395331869602226844454176857041571564330517965293405529542625178446814605415152202805602762902818584651544704245241395192311131951639290517204704480255178082890277812274420119335891511
GCF_035770615.1NC_086209NC_086209.1Melospiza melodia melodia isolate bMelMel2 chromosome 16; bMelMel2.pri; whole genome shotgun sequence.56912105696991469833746947560207812940.270.270.230.2300.450.94220.00090.99911.993321118539629243963281668241458326790620112997090.240.260.240.2600.50.91390.12260.88731.9748879717815533313720711121015156215450205544810.260.210.260.2800.530.8560.32280.74291.933401808859207863314732301649484070102060.240.290.220.2500.470.88090.21610.81551.949903023532947429250228562354501051250.270.250.230.2500.480.86950.25960.78651.956201242981323179594810034804529110.270.30.20.2200.430.89230.17330.8511.956701122739414901560.180.240.260.3200.580.86080.36830.70341.94980000000000NANANANANANANANANANA039185011916216838975839354518833653381220023770289716512042296525004459312221597364164436642724654832931020235011343893319720332090111932503328310243002061480246852073373040153552156833573482211519401105215010433487370242094972136213585326527052600963
GCF_035770615.1NC_086210NC_086210.1Melospiza melodia melodia isolate bMelMel2 chromosome 17; bMelMel2.pri; whole genome shotgun sequence.39916463999150447814946218872226170930580.230.230.260.2700.530.87180.01670.98351.996899661659658798423116589119492134311040.220.230.280.2800.560.89250.12830.88761.962199283711773840323539234340671490.220.170.30.3100.610.84160.33030.74021.867702351927908258812628801035960.190.240.290.2800.570.84280.35830.71911.92150225271972220922432345087690.20.240.270.2900.560.85130.30560.74891.9492945985374668754450221040.170.220.340.2700.610.8490.36020.7181.91480000000000NANANANANANANANANANA0889972567724134291143303401119590.230.230.260.2700.540.89890.05660.94571.9920219323113130383624445964043191533212363891931922143272271543661585031623564179897396171551221918832438839096979112537911262499742271159223821411022839926437549136921996109818514724144427
GCF_035770615.1NC_086211NC_086211.1Melospiza melodia melodia isolate bMelMel2 chromosome 18; bMelMel2.pri; whole genome shotgun sequence.44939144409497385424338027350165603890.270.270.230.2300.460.93980.01620.98391.995922321844130777913451898262555528849040120401480.240.260.240.2600.50.91260.12230.88811.974400220018738717979914942020267220595307378440.250.210.260.2800.540.85780.30350.7551.935602129900245359717605571964880083089340.240.290.230.2500.480.87630.22550.80951.94390152439156101571214093147550601700.260.230.240.2700.50.86470.27810.77751.95110287132310596213466225923010371170.260.290.220.2300.450.89780.14260.87691.9702022448678610603070.160.220.280.3400.630.87610.26280.77671.93770000000000NANANANANANANANANANA04757635011902784518979875195244947225447243350423660206126013895329759144288299710071214950213485870841861484277315325154406128682696133741194354417558092768629259922910473152754971225843664793298828651511267713924719472153856342896303812453789107536531409
GCF_035770615.1NC_086212NC_086212.1Melospiza melodia melodia isolate bMelMel2 chromosome 19; bMelMel2.pri; whole genome shotgun sequence.420614142487863800373385023113161055440.260.260.240.2400.480.93140.01160.98851.99821832043872105482234628019147842095417084619630.230.260.250.2600.510.91340.11850.89061.9838316817534314306411323916141016481205825250.250.20.260.2800.540.85560.32240.74281.934301451837166673512722421410503058013170.230.280.230.2600.490.87920.22060.81271.95480152237148251426215461153670599150.240.230.260.2700.530.86650.24930.79271.9608870492579778278046503395750.240.280.230.2500.480.89250.16950.85691.966901121835434801440.120.240.30.3300.630.86390.37750.70481.91820000000000NANANANANANANANANANA039735194940211245076696400417893851407119653838301017462086290424994793306620537894161539772633666934531059223010714107323920692161111135053531337147912097500950782174361541723850156036334016213321061236221486837124145454745323462393915289468127261037
GCF_035770615.1NC_086213NC_086213.1Melospiza melodia melodia isolate bMelMel2 chromosome 20; bMelMel2.pri; whole genome shotgun sequence.40751444013712371360636422642620154473460.260.260.240.2400.480.92790.01730.98291.99822021984002351212267671320836072312626094241580.240.260.240.2600.50.91280.12650.88411.979473317717134815940512763017734018399506483700.250.210.260.2800.540.85580.31760.74581.934801672576196486114347061606865066790080.240.290.220.2500.470.87760.23010.80521.94960231841155861466314376143370589620.270.240.240.2500.490.86230.27390.77711.955306437863957497455023302283130.280.290.210.2200.430.8850.20680.82791.953014564829512003610.180.230.260.3300.60.88570.24690.78451.95770000000000NANANANANANANANANANA043305764108824024826765444922175418345922183460330861756230932562785523433852407894918974309324879663634121024731254463036152454234511313686382336235127226854605527249741644701402819123917413523982586125924441101417443004699509278825341151336276529211386
GCF_035770615.1NC_086214NC_086214.1Melospiza melodia melodia isolate bMelMel2 chromosome 21; bMelMel2.pri; whole genome shotgun sequence.37495243725748358284135395290145976420.260.260.250.2400.490.92230.00930.99081.99961941913852119582240839519660062151229086452120.230.260.250.2600.510.91030.12090.88921.978558716715632313126310642215657616050205547630.250.20.270.2900.550.85420.31940.74511.932701566134182704914264781575084063947450.230.280.240.2500.490.87550.23650.80141.94990213253137191427211973129620529260.260.230.240.2700.510.86040.28670.76621.945607240177902573466156602692150.250.270.220.2600.480.87830.21980.82121.94770101111620240710.150.230.280.3400.620.8870.27610.76041.94510000000000NANANANANANANANANANA035834772778194540636577396016203614408715853508265017031832274222284813294118268217164638592448657233559371946952394731321893203085432203381324845931886526448912289305840853894142835893405207920211232224173935963917424737523792361979273053425711036
GCF_035770615.1NC_086215NC_086215.1Melospiza melodia melodia isolate bMelMel2 chromosome 22; bMelMel2.pri; whole genome shotgun sequence.34648683479856340193333510160136976730.250.250.250.2400.490.92480.00970.99041.99981851463311920246216819018678222039995079962530.230.250.250.2700.520.91040.11530.89331.978844516112528612785410219315030115403905343870.250.20.270.2900.560.85390.31950.74471.931201456968169037513947611534165060762690.230.280.240.2600.50.87650.22890.80671.9541019183771846354684168380272170.260.220.250.2600.520.86030.25140.79241.950803987241668358163671801540740.240.280.240.2400.480.88520.21980.82451.951402023136334601460.210.250.220.3100.540.82050.25780.77721.98010000000000NANANANANANANANANANA034614490714200541885889391815153450380215553474258416921893263723324317268417047332180036122568677832178721889889406828441946197176831953130306644111897475146361975316240543570141936893288198618821087197077138883874419334222992273937263547124841005
GCF_035770615.1NC_086216NC_086216.1Melospiza melodia melodia isolate bMelMel2 chromosome 23; bMelMel2.pri; whole genome shotgun sequence.3299826328771832217763202098800130122180.250.250.250.2500.490.82730.00490.99511.9998109103212722690805624787206834871031503910.210.230.270.2900.560.89210.14390.8711.964378393901836168049293918629054702933820.220.180.30.3100.610.84590.31780.74641.90860497608571346506698549798021254500.20.240.270.2900.550.84140.33010.74031.91180971639374647402347900173970.250.230.240.2800.520.85560.32950.73781.938302667127575252112693601063930.240.290.210.2600.460.86340.29330.77761.90760101101721230710.140.240.30.3200.620.8870.30470.75061.93870000000000NANANANANANANANANANA015522059272782217834762096664206122295821329120113227341534931253714846374230883191410903100229334061128021511769724107819714352038181934161096329527091920107328822178548245714328749019741787211188122512133981859186267411211341125717
GCF_035770615.1NC_086217NC_086217.1Melospiza melodia melodia isolate bMelMel2 chromosome 24; bMelMel2.pri; whole genome shotgun sequence.3409394335567431592333060997213129855110.260.260.240.2400.480.93390.02370.97661.99861782043821864258208281417293771890250075666990.230.250.250.2700.520.90760.12550.88541.9691167813717331014484511333316354317260805943290.250.20.260.2900.550.85460.3340.73381.931301312681151906511562431274383052623720.230.280.240.2600.490.87090.24330.79691.94060341852198432041919249196010791120.250.240.250.2600.510.86420.25180.79341.949507656784369642867151502967370.260.30.210.2400.450.88140.21310.81951.9485036913014716521106530.20.230.250.3200.580.8850.23110.79671.96290000000000NANANANANANANANANANA03900605185419604314796643451856374339861774432527721729183432382372507433652042915716233896281871793440980205610754105339820392248943330338663404450922025671482225453583440138681452378335762027212712292307813350739954007444256922691003284864225311268
GCF_035770615.1NC_086218NC_086218.1Melospiza melodia melodia isolate bMelMel2 chromosome 25; bMelMel2.pri; whole genome shotgun sequence.28299782808020331573832640453158122209390.230.230.270.2700.540.9180.01180.98831.9955193189382744576820947963693100449340035341090.190.220.290.300.590.87870.18840.83661.9498554159144303777416478113043713051404034730.20.160.320.3200.640.84170.33260.73741.8874041544847727051341654394640019504800.190.230.280.300.580.82720.40710.69061.8898016173363086497710968750267890.230.20.280.2900.570.84590.35710.71961.910402654326970277102774001089630.220.250.270.2600.530.85290.3460.72591.925900223027395001460.210.180.270.3400.610.88390.28210.75591.94990000000000NANANANANANANANANANA0194427573059612652478129206213273312155713671671192310741686129035511998703563913512664125445632948430727344304420747651556187169225642507513213304952407829201095438834376334127189512831021144827411892566324228601163059320593912641301331991
GCF_035770615.1NC_086219NC_086219.1Melospiza melodia melodia isolate bMelMel2 chromosome 26; bMelMel2.pri; whole genome shotgun sequence.2775657277771526616962675035600108907030.250.260.240.2500.490.93910.00290.99711.9997133161294144928916344941382957152003220059869720.240.260.240.2600.510.90720.13090.88121.979501161372531023188472613338913531804557510.230.190.280.300.580.85210.31290.74991.9229010448381206922963001106723320042821940.230.270.240.2600.50.8650.27380.77761.938601117281066711376942099530414160.260.240.230.2700.50.85450.29590.76151.939903443236935297143172101328020.250.30.210.2300.440.87170.25410.79491.94460101121620260740.160.220.270.3500.620.8870.27330.75961.94360000000000NANANANANANANANANANA027723586571152633775195336011763131347411372456217716831537214017893956241613666667136330851830537329027191415661340124421415165055723832713272440631636475539902197214936853416100032022647172315151086231152929993226349526423212374941199640920191002
GCF_035770615.1NC_086220NC_086220.1Melospiza melodia melodia isolate bMelMel2 chromosome 27; bMelMel2.pri; whole genome shotgun sequence.2611130267602127644272808771600108609490.240.250.250.2600.510.91680.02020.981.9994148131279102031611523811083384117785840044343390.220.240.260.2800.540.90210.13130.88081.97113662130111241831386357211035611176103688270.240.180.280.300.590.84770.34650.7281.91230602970703034630918694408026313300.210.260.260.2800.530.86060.27870.77321.9339018173566767225719575790286750.240.230.260.2800.530.86110.27460.77571.94880206612149617545199750796770.220.280.220.2800.510.87040.31460.74871.93620000000000NANANANANANANANANANA0000000000NANANANANANANANANANA02100320241910522682487524948132680263282120081641139010341777128631491988918523710732472151546812351505982448264921079731309402194824262217381813313961345918541870345624627272879210811791046101018173732277273829241891967222162114632091369739
GCF_035770615.1NC_086221NC_086221.1Melospiza melodia melodia isolate bMelMel2 chromosome 28; bMelMel2.pri; whole genome shotgun sequence.2245283223686324314082385376120093001300.240.240.260.2600.520.92670.01140.98871.9991581433011201084134102513013651397589100052420630.220.240.260.2800.530.9030.13280.88021.9795344137124261908207388012636412530004163640.230.180.290.300.590.85180.32060.74471.9229075476386980477629385036640032516260.210.260.250.2700.530.86130.27420.7771.9413012102297529321936592730377110.240.210.270.2800.550.86120.25440.79161.94050289172890429490285712001160820.240.280.230.2500.480.8730.27440.78541.934802245468769502930.180.230.260.3200.580.90150.2240.80261.96760000000000NANANANANANANANANANA0268434134341300294751112931880313931118121877192115881278218514883813238610076333117428771509498229135171170424283725709911597330220127542380443815194453389420131669359130237843284225213771292116419823422756319034582012246220374615752281737820
GCF_035770615.1NC_086222NC_086222.1Melospiza melodia melodia isolate bMelMel2 chromosome 29; bMelMel2.pri; whole genome shotgun sequence.2338313229463122829322260351514791813740.250.250.250.2500.490.93550.01440.98571.9996841051891143101128724811580571250689048390950.220.240.260.2800.530.90490.12780.88391.9752218674931676318051562878238522802877930.230.180.290.2900.590.85360.32150.74361.92430714685822052715934771293030239640.210.260.250.2700.520.86670.26150.78541.941506111758365646576462040234500.240.230.250.2800.530.86360.260.78461.9560235332549720074232970924010.240.30.210.2500.460.87740.2680.77771.94660000000000NANANANANANANANANANA0000000000NANANANANANANANANANA016552047309106323203171208756921842337580132816511252960137511972363146370338847992010100932281983434777325206815458561062289170216901650295697328472771149511562459219358321521684100091679215032422058213324491451514153357612031681275726
GCF_035770615.1NC_086223NC_086223.1Melospiza melodia melodia isolate bMelMel2 chromosome 30; bMelMel2.pri; whole genome shotgun sequence.183216318327841973427200756040076463340.240.240.260.2600.520.93580.00870.99131.9987150196346992886109827511130061168839043730060.210.230.270.2900.560.89440.14680.87041.95820127165292937577501313593613490804396140.220.180.290.300.60.84710.33430.73581.90820658361751099697323740365028471480.20.240.270.2900.560.84940.3040.75681.91380571256305947550557870228690.240.230.260.2700.530.87230.25230.7881.93760952710325759681440355920.250.270.240.2500.480.87370.24290.80361.949106915223250273339010850.20.230.250.3100.570.88070.17180.84491.9790000000000NANANANANANANANANANA0248535764181269302657513031914335029958922089180616831165225414823823251610196223141530971572505230255359865222946265710951631392203530302478501117435014431427331830448631968033548212913541235142626173532575313530481702709277180717142471594989
GCF_035770615.1NC_086224NC_086224.1Melospiza melodia melodia isolate bMelMel2 chromosome 31; bMelMel2.pri; whole genome shotgun sequence.655181639718869426861515340030292400.220.210.290.2800.570.92660.01650.98361.98439110619742601151064260626564421980021879370.180.210.30.3100.610.86810.19360.83421.9316159271831544433136624806067750002390610.20.160.320.3200.640.83750.34560.72871.8764023707629913431560535378260012061970.180.220.290.3100.60.81740.43660.67221.87280841226333040351334400126260.190.190.30.3200.620.81460.38610.69571.890201095125116732046060650.170.20.270.3600.640.75090.61080.5641.83860000000000NANANANANANANANANANA0000000000NANANANANANANANANANA01142161016460815862898171930117101725295772844119446311417172138121436735888171549641254818922244141211681127943391184932161015903522858324721771865627280216683542590903659593932192781148914331740501988218257277274699556
GCF_035770615.1NC_086225NC_086225.1Melospiza melodia melodia isolate bMelMel2 chromosome W; bMelMel2.pri; whole genome shotgun sequence.164052661636657313302390133838812265594603750.280.280.220.2300.450.9370.00420.99581.992473591321483362157662811697781223023054527910.270.280.210.2400.450.9160.150.86751.97344339824011832142328263451901396050.280.230.230.2500.480.86020.31260.74961.9379011175261215088872234887785040926330.280.320.190.2100.40.88930.21020.82461.9385022123473687359615270250279040.290.250.20.2600.460.87510.34220.73551.9354417818617737515141317698106839550.260.330.180.2200.410.8790.28110.77211.926804267610211514204350.170.230.260.3300.590.88340.25580.77761.96010000000000NANANANANANANANANANA01213127254666697911078067736598707851341802259642846701964715762137947472292514726904947395279236976974656149417467327704657478042901328688727585601105764665222234155777873810062313224102391067311571223
GCF_035770615.1NC_086226NC_086226.1Melospiza melodia melodia isolate bMelMel2 chromosome Z; bMelMel2.pri; whole genome shotgun sequence.24202706243167131682599516665413762847827736740.290.290.20.20.010.40.94520.00710.99291.970747249196310751219118538937126332786608112873376103980.270.290.220.2200.440.91730.1390.87611.961212349379372751391745324708329215352014013976820.290.240.220.2500.480.86250.310.75041.9402073465618282127478228353334420257444130.270.320.190.2100.40.89210.19020.83481.9385074991738925988781640306795403100240.280.260.220.2400.460.86870.28450.77031.94371609208627701406615419687020632110.280.310.190.2100.410.8950.17110.85411.94340011141819210720.190.250.260.2900.560.90990.1750.84131.98510000000000NANANANANANANANANANA0110991283139326826971312106889272966839908178291288582732512657576347405958078337854154044224801584991452263824011780548419496714772975321508798907319738563245498878994173520129387122784558885663108116529653320773384469775917361892023073274348919478774332175752183