GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_012460135.2	NC_050478	NC_050478.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 1; BPBGC_Mater_1.1; whole genome shotgun sequence.	46412745	46202946	30527524	30430751	2300	153576266	0.3	0.3	0.2	0.2	0	0.4	0.9463	0.0039	0.9962	1.9691	750	844	1594	21454143	23676567	14083227	15560747	500	74775184	0.27	0.29	0.21	0.23	0.44	0.9179	0.1236	0.8871	1.9629	34464	599	677	1276	634317	518352	556235	590365	2299269	0.29	0.23	0.23	0.25	0.48	0.861	0.3176	0.7458	1.936	0	15349275	17155314	9873646	10949577	400	53328212	0.28	0.32	0.19	0.21	0	0.4	0.8919	0.1821	0.8424	1.9341	79	92	171	99924	98398	69345	71589	339256	0.29	0.26	0.22	0.24	0	0.45	0.8683	0.2669	0.7832	1.9398	0	562992	583523	363752	375003	0	1885270	0.28	0.32	0.19	0.21	0	0.4	0.8961	0.1667	0.86	1.9423	0	15	25	40	615	668	729	946	2958	0.21	0.23	0.24	0.32	0	0.56	0.871	0.2165	0.8152	1.9707	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18209	21580	6138	11024	15799	21197	14477	11690	12704	14194	12233	20495	13141	5013	10129	12655	11568	16257	12877	12790	24810	7179	12780	13054	23915	11185	6166	12185	7570	15486	12079	11380	8357	7984	15554	12235	11434	12289	8910	15208	16091	6246	21563	13103	12510	9063	10726	16634	9885	9917	3956	6721	7378	12886	12851	15054	3438	6861	6845	3430	13951	4919	10995	3682
GCF_012460135.2	NC_050479	NC_050479.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 2; BPBGC_Mater_1.1; whole genome shotgun sequence.	34986886	34986182	23253971	23251011	1500	116479550	0.3	0.3	0.2	0.2	0	0.4	0.9452	0.0001	0.9999	1.9705	676	615	1291	16273178	17884851	10890203	11947489	400	56996121	0.27	0.29	0.21	0.23	0.44	0.9202	0.117	0.892	1.9692	30199	554	501	1055	513796	424946	452861	478699	1870302	0.28	0.23	0.23	0.25	0.48	0.8616	0.3123	0.7491	1.9395	0	11157968	12470936	7297676	8063370	200	38990150	0.27	0.32	0.19	0.22	0	0.41	0.8934	0.1841	0.8399	1.9448	64	56	120	64669	65890	47337	49204	227100	0.28	0.26	0.22	0.24	0	0.46	0.8686	0.2557	0.7896	1.9458	0	653853	685135	428509	449835	0	2217332	0.28	0.31	0.2	0.21	0	0.41	0.899	0.1604	0.8618	1.9486	0	11	8	19	245	320	365	479	1409	0.17	0.23	0.26	0.34	0	0.6	0.8898	0.2751	0.7634	1.9528	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14801	17507	4735	8878	12957	16880	11678	9327	10392	12868	9757	15940	10930	4122	8218	10011	9568	13438	10700	10201	20736	5610	10685	10357	19774	9139	5315	10520	6113	12171	9687	9445	6733	6262	12914	9708	9267	10049	7158	11757	13360	4806	17372	10096	10797	7116	8700	13660	8348	8136	3048	4962	5716	10758	10703	12842	2917	5111	5067	2671	11416	3942	9390	2941
GCF_012460135.2	NC_050480	NC_050480.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 3; BPBGC_Mater_1.1; whole genome shotgun sequence.	33746145	33650281	22500425	22451511	1800	112350162	0.3	0.3	0.2	0.2	0	0.4	0.9468	0.0025	0.9975	1.971	600	632	1232	16710686	18504086	11036337	12211520	300	58462929	0.27	0.3	0.21	0.22	0.43	0.9226	0.1158	0.8931	1.9705	9786	489	502	991	497120	408683	423020	452811	1781634	0.29	0.24	0.22	0.25	0.48	0.8617	0.3137	0.7482	1.9401	0	11140824	12509993	7174905	7982661	300	38808683	0.28	0.33	0.19	0.21	0	0.4	0.8943	0.1791	0.8434	1.9413	55	67	122	66995	65575	48591	51100	232261	0.28	0.25	0.22	0.24	0	0.47	0.8653	0.2643	0.7848	1.942	0	754716	798663	505097	529139	0	2587615	0.28	0.31	0.2	0.21	0	0.41	0.8995	0.1554	0.8669	1.9495	0	5	8	13	185	209	266	317	977	0.19	0.21	0.27	0.32	0	0.6	0.8809	0.1997	0.8243	1.9619	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14253	16985	4761	8391	11903	16343	11106	9131	9384	11599	9433	16095	9921	3510	7854	9856	9294	12313	9984	10201	19441	5405	10157	10715	18470	8323	5038	10138	5903	12102	9080	9339	6347	6386	11871	9563	8899	8805	7003	11056	12345	4404	17285	9545	9874	7275	7572	13481	7760	7897	2810	4808	5823	10205	9700	11685	2803	4631	4736	2546	11059	4176	9100	2855
GCF_012460135.2	NC_050481	NC_050481.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 4; BPBGC_Mater_1.1; whole genome shotgun sequence.	21729610	21989198	14535568	14710558	1800	72966734	0.3	0.3	0.2	0.2	0	0.4	0.9457	0.0119	0.9881	1.9714	468	445	913	10216640	11322903	6907395	7686225	300	36133463	0.26	0.29	0.21	0.23	0.45	0.9177	0.122	0.8877	1.9657	11611	342	377	719	344519	285277	318901	337829	1286526	0.28	0.23	0.23	0.26	0.49	0.8608	0.3109	0.7503	1.9364	0	6822459	7699963	4536950	5087114	200	24146686	0.27	0.32	0.2	0.22	0	0.42	0.8889	0.1994	0.8291	1.9384	85	42	127	47828	45889	38295	41168	173180	0.27	0.24	0.23	0.26	0	0.49	0.8642	0.2761	0.7754	1.9417	0	611956	642751	389342	413642	0	2057691	0.26	0.3	0.21	0.23	0	0.44	0.8918	0.1965	0.8349	1.95	0	1	0	1	8	17	22	25	72	0.11	0.24	0.31	0.35	0	0.65	0.8407	0.4238	0.6753	1.8964	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9302	11618	3235	5778	8881	12000	8436	6000	7193	8439	6300	10663	6971	2882	5448	6827	6306	9513	7096	6844	14514	3896	7535	7272	13704	6308	3290	6618	3877	8962	6547	6235	4645	4054	8361	7044	6562	7481	4732	8840	9209	3809	11219	7741	7661	4794	6404	9182	5833	5519	2196	4021	3782	7619	7344	8688	1875	4341	4138	1945	7678	2662	6516	2219
GCF_012460135.2	NC_050482	NC_050482.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 5; BPBGC_Mater_1.1; whole genome shotgun sequence.	21518076	21748382	14769780	14895584	600	72932422	0.3	0.3	0.2	0.2	0	0.41	0.9462	0.0096	0.9905	1.9747	520	481	1001	11575487	12779732	8033080	8797773	200	41186272	0.26	0.28	0.22	0.24	0.45	0.9175	0.1239	0.8869	1.9675	6344	444	412	856	385882	317624	350664	370324	1424494	0.28	0.23	0.23	0.26	0.49	0.8607	0.3179	0.7453	1.9369	0	7699136	8624786	5269948	5785777	200	27379847	0.27	0.31	0.2	0.22	0	0.42	0.8895	0.1887	0.8378	1.9419	33	25	58	27928	28319	19570	20469	96286	0.28	0.25	0.23	0.24	0	0.47	0.8699	0.2462	0.7973	1.9438	0	221337	230713	146906	155125	0	754081	0.27	0.31	0.2	0.21	0	0.41	0.8978	0.1605	0.8618	1.9505	0	4	1	5	60	79	99	123	361	0.17	0.22	0.27	0.34	0	0.62	0.8842	0.247	0.7854	1.9482	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10951	13591	3505	6394	9581	14010	9150	6930	7884	9254	7393	12560	7808	3100	5864	7982	7171	10599	8351	7642	16459	4222	8453	8169	14871	7164	3759	7327	4549	9726	7758	6768	5254	4419	9193	7934	7421	7881	5817	9739	9992	4410	12275	8345	7972	5251	6749	10050	6011	6253	2289	4067	4083	8064	7766	9352	1874	4399	3977	2167	8546	2680	6697	2356
GCF_012460135.2	NC_050483	NC_050483.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 6; BPBGC_Mater_1.1; whole genome shotgun sequence.	18398615	18419516	13089219	13119427	400	63027177	0.29	0.29	0.21	0.21	0	0.42	0.9446	0.0017	0.9983	1.9795	568	501	1069	9944534	11081358	7086601	7848020	100	35960613	0.25	0.28	0.23	0.24	0.47	0.9169	0.1241	0.8857	1.9699	26335	473	413	886	429556	352468	416991	431379	1630394	0.27	0.22	0.24	0.26	0.5	0.8601	0.3186	0.7452	1.9381	0	6694003	7604566	4617199	5157509	100	24073377	0.26	0.31	0.2	0.23	0	0.43	0.8869	0.2063	0.8235	1.9413	52	43	95	35581	34800	27995	29160	127536	0.28	0.24	0.24	0.24	0	0.48	0.8587	0.2889	0.769	1.937	0	451492	467448	309524	319562	0	1548026	0.28	0.3	0.21	0.22	0	0.42	0.9003	0.1374	0.8794	1.9612	0	3	3	6	80	101	116	150	447	0.18	0.23	0.26	0.34	0	0.6	0.8882	0.2665	0.7668	1.9582	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11931	14307	3753	7258	11309	16361	10831	6929	9762	10936	7567	13516	8575	3765	6927	8537	8208	12321	9344	7588	19336	4800	10477	9359	17501	8599	4102	7748	4547	11212	8824	7365	6099	4486	10308	9186	9134	10391	6092	11956	12061	4889	13289	9763	9764	5595	8323	11264	6883	6711	2762	4832	4120	9807	9742	11436	1999	5429	4962	2644	9682	2792	7666	3077
GCF_012460135.2	NC_050484	NC_050484.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 7; BPBGC_Mater_1.1; whole genome shotgun sequence.	11139860	11155592	8018641	8009830	200	38324123	0.29	0.29	0.21	0.21	0	0.42	0.9446	0.0013	0.9987	1.9806	277	284	561	6187416	6861912	4377918	4853484	100	22280830	0.26	0.28	0.22	0.24	0.46	0.919	0.1204	0.8891	1.9693	5824	232	232	464	289474	234452	257715	273597	1055238	0.28	0.23	0.23	0.26	0.49	0.861	0.3152	0.7475	1.9401	0	4439381	5020125	3079132	3432458	0	15971096	0.27	0.32	0.2	0.22	0	0.41	0.8876	0.1995	0.8286	1.9405	20	12	32	10052	9526	7422	7153	34153	0.29	0.25	0.23	0.23	0	0.46	0.8686	0.2482	0.7931	1.9435	0	100629	104643	67716	70458	0	343446	0.28	0.3	0.2	0.22	0	0.42	0.8938	0.1537	0.8686	1.9438	0	13	9	22	301	364	427	544	1636	0.18	0.22	0.26	0.33	0	0.59	0.8893	0.2534	0.7818	1.958	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8738	10621	2577	4740	7891	9553	6631	4824	5811	7009	5046	8375	6347	2302	4776	5694	5148	8064	5607	5156	12367	3346	6140	5590	11517	5229	2849	6261	3000	7026	5431	4857	3750	3436	7203	5454	5567	5776	4020	7017	7632	2627	9280	5661	6062	3645	4940	7996	4370	4511	1694	2716	3459	6113	6406	7647	1730	2752	2857	1480	6350	2415	5548	1506
GCF_012460135.2	NC_050485	NC_050485.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 8; BPBGC_Mater_1.1; whole genome shotgun sequence.	10301491	10449057	7620851	7721013	1100	36093512	0.29	0.29	0.21	0.21	0	0.43	0.9442	0.0136	0.9865	1.9837	293	268	561	5849108	6529285	4272296	4772721	300	21423710	0.26	0.28	0.22	0.24	0.47	0.9175	0.121	0.8891	1.9697	310	247	237	484	230997	188127	219833	229819	868776	0.27	0.22	0.24	0.26	0.5	0.8604	0.3114	0.7497	1.9391	0	4236756	4809189	2991780	3361275	200	15399200	0.26	0.31	0.21	0.23	0	0.43	0.8879	0.197	0.8301	1.946	18	9	27	8195	8349	6630	6563	29737	0.28	0.25	0.24	0.23	0	0.47	0.8654	0.2897	0.7652	1.9378	0	92598	97293	67219	71042	0	328152	0.28	0.3	0.2	0.22	0	0.43	0.8973	0.1615	0.8602	1.9596	0	1	1	2	23	33	45	53	154	0.15	0.21	0.29	0.34	0	0.64	0.8898	0.2693	0.7719	1.9298	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6470	7821	2041	3884	6338	8209	5739	3795	4853	6152	4060	7091	4681	2043	3647	4632	4216	6440	4703	4071	10094	2605	5291	4747	9154	4428	2287	4265	2502	6014	4487	3986	3120	2423	5581	4615	4738	5396	3232	6334	6498	2501	7450	5272	5390	2934	4509	6080	3784	3693	1387	2680	2297	5395	5198	6359	1160	2806	2631	1295	5086	1645	4363	1459
GCF_012460135.2	NC_050486	NC_050486.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 9; BPBGC_Mater_1.1; whole genome shotgun sequence.	9020521	8956122	6772627	6732018	1000	31482288	0.29	0.28	0.22	0.21	0	0.43	0.9443	0.0066	0.9934	1.9854	270	318	588	5338798	5933360	4036650	4445176	600	19754584	0.26	0.28	0.22	0.24	0.46	0.9185	0.1176	0.8912	1.9748	4992	208	247	455	213588	173346	208897	218174	814005	0.27	0.22	0.24	0.27	0.51	0.8589	0.3123	0.7488	1.9375	0	3309056	3760045	2474673	2747591	300	12291665	0.26	0.31	0.21	0.23	0	0.44	0.8859	0.2047	0.8243	1.9472	35	43	78	44217	43066	32810	34807	154900	0.27	0.25	0.23	0.24	0	0.47	0.8604	0.2679	0.7806	1.9445	0	459407	490999	313075	330797	0	1594278	0.28	0.31	0.2	0.21	0	0.41	0.9001	0.1543	0.8643	1.955	0	2	1	3	37	51	61	77	226	0.17	0.23	0.26	0.34	0	0.6	0.8563	0.2767	0.7601	1.9479	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5946	7131	1770	3568	5909	7634	5682	3326	4837	5635	3572	6387	4414	2070	3436	4068	3882	6141	4365	3766	9562	2564	4865	4165	9148	4308	1889	3656	2271	5773	4228	3611	2965	2189	5445	4465	4410	5210	3060	6123	6372	2385	6565	5162	5119	2793	4372	5952	3446	3349	1380	2525	2026	5044	5123	5814	937	2686	2560	1306	4641	1387	3926	1516
GCF_012460135.2	NC_050487	NC_050487.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 10; BPBGC_Mater_1.1; whole genome shotgun sequence.	7320595	7198771	5725412	5644598	400	25889776	0.28	0.28	0.22	0.22	0	0.44	0.9437	0.0155	0.9846	1.9892	265	319	584	3553145	3975658	2788375	3076728	0	13393906	0.24	0.26	0.24	0.26	0.49	0.9106	0.1221	0.8872	1.9757	8638	216	188	404	168446	138982	175002	179398	661828	0.27	0.22	0.25	0.27	0.52	0.8592	0.3096	0.7511	1.9399	0	2382114	2709708	1811518	2006976	0	8910316	0.25	0.3	0.22	0.24	0	0.45	0.8836	0.2061	0.8235	1.9496	21	27	48	21503	22147	16744	17320	77714	0.28	0.26	0.22	0.24	0	0.46	0.8684	0.2578	0.7899	1.9472	0	115311	121256	84502	87751	0	408820	0.27	0.31	0.21	0.21	0	0.42	0.8984	0.1497	0.8703	1.9612	0	10	8	18	299	315	317	416	1347	0.22	0.23	0.24	0.31	0	0.54	0.8738	0.2593	0.7738	1.9738	0	0	78	78	1872	1716	2652	3042	9282	0.2	0.18	0.29	0.33	0	0.61	0.8807	0.112	0.8942	1.9599	4833	5727	1293	2848	4732	6795	4319	2605	4061	4532	2799	4874	3563	1859	2488	3600	3111	5123	3795	3036	8560	2028	4215	3499	7490	3819	1406	2969	1596	4670	3713	2704	2518	1549	4139	3944	3689	4409	2631	5327	5155	2200	4628	4306	4226	2088	3731	4392	2622	2698	1279	2074	1389	4149	4080	4846	677	2359	2176	947	3508	903	2986	1126
GCF_012460135.2	NC_050488	NC_050488.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 11; BPBGC_Mater_1.1; whole genome shotgun sequence.	5932168	5886056	4809066	4766096	900	21394286	0.28	0.28	0.22	0.22	0	0.45	0.9438	0.0084	0.9916	1.992	199	208	407	3566816	4017038	2853071	3174366	300	13611591	0.24	0.26	0.24	0.26	0.5	0.9138	0.1177	0.8913	1.971	603	157	154	311	138159	114428	151339	155976	559902	0.26	0.21	0.26	0.28	0.53	0.8571	0.3139	0.7482	1.935	0	2259944	2581965	1746420	1953245	300	8541874	0.24	0.28	0.23	0.25	0	0.48	0.8781	0.2229	0.8114	1.9447	24	24	48	16751	15867	13632	14598	60848	0.27	0.23	0.24	0.26	0	0.49	0.8597	0.2885	0.7691	1.9435	0	61708	67095	51523	55105	0	235431	0.25	0.29	0.22	0.24	0	0.46	0.8855	0.1795	0.849	1.9576	0	1	0	1	17	18	20	28	83	0.2	0.22	0.24	0.34	0	0.58	0.887	0.1952	0.8294	1.9703	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3950	4862	989	2267	4135	5711	3888	2023	3388	4071	2133	3833	2861	1584	2051	2898	2457	4671	3133	2244	7118	1597	3439	2756	6318	3360	1196	2319	1308	3928	3186	2189	2211	1147	3426	3383	3245	4106	2125	4734	4405	2110	3577	4078	3855	1676	3500	3455	2235	2199	1098	2012	1111	3400	3440	4007	559	2156	2230	931	2807	780	2623	1102
GCF_012460135.2	NC_050489	NC_050489.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 12; BPBGC_Mater_1.1; whole genome shotgun sequence.	6005552	6014884	4677465	4689660	700	21388261	0.28	0.28	0.22	0.22	0	0.44	0.9434	0.0021	0.9979	1.9889	217	205	422	2763055	3082140	2270282	2486924	100	10602501	0.24	0.26	0.24	0.26	0.5	0.9135	0.1176	0.8913	1.9721	6077	177	156	333	141898	117858	159485	162240	581481	0.25	0.21	0.26	0.28	0.54	0.8579	0.2986	0.7587	1.9357	0	1816121	2070237	1433985	1593062	100	6913505	0.23	0.28	0.23	0.26	0	0.49	0.8762	0.2296	0.8068	1.9416	16	22	38	11686	11284	10318	10605	43893	0.27	0.25	0.24	0.24	0	0.48	0.8615	0.239	0.8007	1.9495	0	165095	179920	125403	131992	0	602410	0.27	0.31	0.21	0.22	0	0.43	0.8985	0.1436	0.8745	1.9633	0	8	5	13	164	221	258	314	957	0.17	0.23	0.27	0.33	0	0.6	0.8851	0.2507	0.7804	1.9575	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4061	5034	1093	2426	4161	6344	3894	2010	3726	3949	2101	4045	2884	1687	2110	3005	2626	4820	3186	2336	7564	1681	3650	2754	6622	3387	1152	2327	1213	3884	3205	2273	2261	1242	3433	3563	3353	4468	2242	5069	4714	2318	3496	4128	3894	1804	3449	3545	2326	2290	1247	2325	1106	3676	3667	4185	499	2431	2529	1006	2939	728	2676	976
GCF_012460135.2	NC_050490	NC_050490.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 13; BPBGC_Mater_1.1; whole genome shotgun sequence.	5745544	5775114	4542750	4558579	300	20622287	0.28	0.28	0.22	0.22	0	0.44	0.945	0.0043	0.9957	1.99	227	215	442	3309957	3697593	2622684	2911970	0	12542204	0.25	0.27	0.23	0.25	0.48	0.9156	0.1215	0.8881	1.9716	1432	188	173	361	177039	139791	178887	188097	683814	0.27	0.21	0.25	0.27	0.52	0.8575	0.324	0.7414	1.9325	0	2268364	2595497	1748616	1959686	0	8572163	0.25	0.29	0.22	0.24	0	0.46	0.8803	0.2163	0.8162	1.9446	20	19	39	17240	16949	13922	14427	62538	0.26	0.24	0.24	0.26	0	0.5	0.8653	0.255	0.791	1.9479	0	67945	71135	54193	55721	0	248994	0.27	0.28	0.22	0.23	0	0.45	0.8922	0.1497	0.8733	1.9484	0	4	4	8	110	130	153	187	580	0.19	0.22	0.26	0.32	0	0.59	0.8963	0.2403	0.7887	1.9622	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4684	6188	1305	2833	5031	7559	4552	2628	4111	4841	2804	5550	3604	1889	2742	3626	3233	5186	3512	2766	8496	1985	4050	3688	7728	3767	1424	2893	1611	4768	3634	2693	2380	1584	4175	4116	3705	4484	2502	5372	5567	2412	5133	4641	4235	2156	3630	4656	2764	2825	1491	2472	1530	4104	4116	4824	701	2663	2440	1120	3923	1065	3211	1344
GCF_012460135.2	NC_050491	NC_050491.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 14; BPBGC_Mater_1.1; whole genome shotgun sequence.	5564715	5595451	4516991	4559794	1000	20237951	0.27	0.28	0.22	0.23	0	0.45	0.9433	0.0075	0.9926	1.9923	214	182	396	2733329	3073574	2260892	2509035	100	10576930	0.24	0.27	0.24	0.26	0.5	0.9142	0.125	0.885	1.9779	5157	169	154	323	127859	104173	140399	143254	515685	0.26	0.21	0.25	0.27	0.53	0.8569	0.3196	0.745	1.9336	0	1742409	1993320	1415938	1584223	0	6735890	0.24	0.29	0.22	0.25	0	0.47	0.882	0.215	0.8166	1.9514	28	14	42	21473	22442	18245	18698	80858	0.26	0.26	0.24	0.25	0	0.48	0.8706	0.2349	0.8054	1.9587	0	88517	95770	67047	70957	0	322291	0.26	0.31	0.21	0.23	0	0.44	0.8894	0.2027	0.8353	1.9487	0	2	1	3	41	60	55	73	229	0.18	0.25	0.24	0.32	0	0.56	0.8658	0.392	0.6838	1.952	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3703	4578	859	2098	3690	5466	3336	1821	3367	3545	1929	3484	2710	1446	1943	2719	2359	4057	2846	2045	6709	1504	3328	2564	6014	3010	1024	2251	1107	3551	2902	1956	1938	1090	3158	3014	2907	3990	1932	4414	4337	1894	3419	3696	3256	1488	3218	3227	1979	1817	1055	1939	1025	3257	3413	3907	488	2084	1963	754	2529	642	2362	886
GCF_012460135.2	NC_050492	NC_050492.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 15; BPBGC_Mater_1.1; whole genome shotgun sequence.	5050510	5025161	4315745	4273393	500	18665309	0.27	0.27	0.23	0.23	0	0.46	0.9431	0.0074	0.9926	1.9954	177	213	390	2628383	2944004	2243433	2484822	100	10300742	0.23	0.26	0.25	0.27	0.51	0.9138	0.1228	0.8869	1.9722	973	148	181	329	128749	106816	154068	163457	553090	0.26	0.2	0.26	0.28	0.54	0.8562	0.3286	0.7391	1.9314	0	1731632	1970897	1423950	1583581	100	6710160	0.23	0.28	0.23	0.25	0	0.48	0.8815	0.2139	0.8177	1.9531	15	9	24	11384	11444	9615	10171	42614	0.25	0.24	0.24	0.26	0	0.51	0.8706	0.2358	0.8043	1.9508	0	59807	65467	47985	51715	0	224974	0.24	0.29	0.22	0.25	0	0.47	0.8917	0.2339	0.8046	1.9602	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3428	4446	850	2034	3615	6837	3467	1688	3432	3709	1812	3290	2539	2018	1898	3099	2376	5795	3044	1902	8028	1555	3508	2650	6081	3028	964	2087	1044	3481	2957	1913	2117	972	3072	4260	2899	4273	2256	5256	4876	2621	3073	4403	3421	1401	3549	3199	1900	1784	1839	3708	869	3051	3580	3630	437	2627	2731	874	2411	580	2279	1008
GCF_012460135.2	NC_050493	NC_050493.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 16; BPBGC_Mater_1.1; whole genome shotgun sequence.	4508861	4426891	3853314	3809406	300	16598772	0.27	0.27	0.23	0.23	0	0.46	0.94	0.0149	0.9852	1.9957	216	204	420	2795367	3140049	2405283	2648220	100	10989019	0.24	0.26	0.24	0.26	0.5	0.9123	0.1215	0.888	1.9728	1450	179	174	353	148975	124245	161664	164843	599727	0.26	0.22	0.26	0.27	0.53	0.8584	0.299	0.7575	1.9376	0	1908002	2193634	1565231	1746918	0	7413785	0.24	0.29	0.22	0.25	0	0.47	0.8779	0.2213	0.8123	1.9436	9	11	20	8267	8015	6980	7007	30269	0.24	0.23	0.27	0.27	0	0.54	0.8606	0.2094	0.822	1.9491	118	51901	55475	44134	47976	0	199486	0.25	0.27	0.22	0.25	0	0.48	0.8951	0.1484	0.8698	1.962	9470	2	2	4	48	67	86	106	307	0.16	0.22	0.28	0.34	0	0.63	0.8761	0.2628	0.7767	1.9377	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4002	5175	1042	2344	4125	6222	4105	2229	3719	4401	2139	4310	2992	1558	2206	3215	2711	4719	3494	2633	7910	1738	4026	2938	7020	3363	1299	2347	1321	4228	3354	2444	2247	1185	3434	3577	3403	4519	2279	5013	4721	2195	4083	4089	3953	1978	3434	3982	2513	2435	1171	2018	1227	3705	3568	4203	601	2231	2343	998	3143	985	3076	1131
GCF_012460135.2	NC_050494	NC_050494.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 17; BPBGC_Mater_1.1; whole genome shotgun sequence.	4018587	4070067	3621922	3642539	200	15353315	0.26	0.27	0.24	0.24	0	0.47	0.9369	0.0092	0.9908	1.9979	173	200	373	2048789	2289287	1854510	2030109	100	8222795	0.23	0.26	0.25	0.26	0.51	0.9141	0.1171	0.8918	1.9791	633	147	165	312	130614	103026	144106	146303	524049	0.26	0.2	0.26	0.28	0.54	0.8564	0.3249	0.7412	1.9347	0	1242380	1432571	1106363	1226069	100	5007483	0.23	0.28	0.23	0.26	0	0.49	0.8798	0.2198	0.8128	1.9549	9	20	29	10344	11201	9507	10377	41429	0.25	0.23	0.24	0.27	0	0.51	0.8681	0.2788	0.7742	1.9506	1	113008	121337	87652	92602	0	414599	0.24	0.3	0.22	0.25	0	0.47	0.8881	0.2455	0.8015	1.9587	0	1	1	2	18	35	43	48	144	0.12	0.24	0.3	0.33	0	0.63	0.8639	0.3775	0.7048	1.9182	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3585	4808	917	2004	3980	5726	3530	1710	3505	3635	1853	3515	2758	1516	1999	2670	2290	4139	2784	1913	6793	1452	3533	2420	5904	3117	1006	2018	1024	3631	2878	1933	1930	1054	3219	3120	2997	4219	1910	4450	4655	1886	3397	3680	3400	1431	3165	3700	1991	1913	1087	1914	844	3327	3697	4038	450	2100	2094	813	2704	673	2450	930
GCF_012460135.2	NC_050495	NC_050495.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 18; BPBGC_Mater_1.1; whole genome shotgun sequence.	3794552	3819745	3403889	3429183	500	14447869	0.26	0.26	0.24	0.24	0	0.47	0.94	0.007	0.993	1.9979	192	198	390	2262516	2579249	2023505	2245805	300	9111375	0.24	0.26	0.24	0.26	0.5	0.9137	0.1246	0.8854	1.9783	53	159	168	327	140189	111848	155046	159752	566835	0.25	0.21	0.26	0.28	0.54	0.8553	0.3213	0.7434	1.9328	0	1539666	1797796	1320054	1478113	200	6135829	0.24	0.29	0.23	0.25	0	0.48	0.8791	0.2252	0.8091	1.9499	9	14	23	10359	11356	11389	11993	45097	0.24	0.23	0.26	0.28	0	0.54	0.8657	0.2491	0.7936	1.9497	0	12217	14419	13870	14805	0	55311	0.21	0.3	0.21	0.27	0	0.48	0.8781	0.3201	0.7444	1.9451	0	4	1	5	65	83	94	119	361	0.18	0.23	0.26	0.33	0	0.59	0.8832	0.2458	0.7852	1.9609	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3860	5088	995	2087	4182	6648	3818	1961	3778	3909	1921	4032	2702	1557	2038	2908	2398	4536	2987	2135	7679	1665	3770	2819	6909	3203	1095	2156	1140	3980	3173	2198	2088	1024	3202	3285	3242	4546	2027	4727	4910	2127	3724	4034	3463	1635	3441	3631	2146	2240	1121	2067	981	3537	3717	4153	440	2440	2282	951	2937	710	2552	1132
GCF_012460135.2	NC_050496	NC_050496.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 19; BPBGC_Mater_1.1; whole genome shotgun sequence.	3419064	3441458	3112891	3142258	1000	13116671	0.26	0.26	0.24	0.24	0	0.48	0.9348	0.008	0.9921	1.9984	190	176	366	1800792	2017059	1684293	1841900	300	7344344	0.23	0.25	0.25	0.27	0.52	0.9082	0.1224	0.8875	1.9706	2808	154	141	295	123949	99290	145294	149012	517545	0.25	0.2	0.27	0.28	0.55	0.8551	0.3257	0.7397	1.9305	0	1209356	1391335	1077660	1190684	300	4869335	0.22	0.27	0.24	0.26	0	0.5	0.8703	0.2392	0.7998	1.9406	16	18	34	13623	14315	12345	13219	53502	0.24	0.23	0.25	0.28	0	0.53	0.8581	0.2563	0.79	1.9411	0	28039	31490	28004	29629	0	117162	0.22	0.3	0.21	0.27	0	0.48	0.8792	0.3047	0.7574	1.9501	0	8	1	9	129	147	165	212	653	0.2	0.23	0.25	0.32	0	0.58	0.8836	0.2374	0.7917	1.9616	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3326	4753	802	1790	3769	6263	3674	1588	3364	3633	1561	3542	2546	1530	1667	2692	2140	4326	2824	1838	7325	1486	3507	2335	6069	3108	937	1867	949	3575	2832	1841	1992	836	2950	3225	3030	4278	1965	4780	4312	2216	3019	3976	3318	1312	3466	3014	1777	1866	1143	2110	760	3236	3432	3781	378	2427	2277	855	2492	582	2183	1133
GCF_012460135.2	NC_050497	NC_050497.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 20; BPBGC_Mater_1.1; whole genome shotgun sequence.	2964768	3005481	2853554	2882887	200	11706890	0.25	0.26	0.24	0.25	0	0.49	0.9354	0.0119	0.9881	1.9997	183	136	319	1845366	2085596	1802928	1972297	0	7706187	0.23	0.25	0.25	0.27	0.52	0.9126	0.1146	0.8939	1.9812	2361	140	111	251	104036	83744	119557	121645	428982	0.25	0.2	0.27	0.28	0.55	0.8556	0.3185	0.7457	1.9337	0	1171745	1361493	1112179	1231051	0	4876468	0.23	0.28	0.24	0.26	0	0.49	0.8795	0.2183	0.8141	1.9567	20	12	32	9842	10001	9347	9321	38511	0.25	0.22	0.27	0.26	0	0.53	0.8615	0.2428	0.8007	1.9439	0	12083	13345	11405	12169	0	49002	0.22	0.3	0.21	0.26	0	0.48	0.8764	0.2928	0.7651	1.9579	0	2	0	2	32	36	33	45	146	0.21	0.25	0.22	0.31	0	0.53	0.8205	0.2405	0.7926	1.9822	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2877	3667	608	1674	3294	4678	3056	1297	2763	3005	1294	2811	2071	1319	1522	2164	1875	3433	2203	1462	5822	1473	2964	2137	5482	2648	754	1536	770	3225	2350	1641	1619	688	2613	2545	2482	3349	1597	3681	3617	1521	2553	3056	2809	1200	2831	2659	1642	1577	863	1484	681	3098	2889	3338	301	1770	1692	716	2220	428	1988	839
GCF_012460135.2	NC_050498	NC_050498.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 21; BPBGC_Mater_1.1; whole genome shotgun sequence.	3006590	2994285	2782985	2755955	600	11540415	0.26	0.26	0.24	0.24	0	0.48	0.9368	0.0069	0.9931	1.9988	174	173	347	2060047	2334394	1932699	2114618	400	8442158	0.23	0.26	0.25	0.26	0.51	0.9109	0.122	0.8895	1.976	5061	148	138	286	115979	94765	136782	138735	486261	0.25	0.2	0.27	0.28	0.55	0.8552	0.3146	0.7477	1.9358	0	1424081	1656100	1288429	1426802	300	5795712	0.23	0.28	0.23	0.25	0	0.49	0.8784	0.2264	0.8083	1.9532	10	20	30	8638	8598	7790	8252	33278	0.25	0.23	0.24	0.28	0	0.52	0.859	0.2416	0.8004	1.9453	0	28917	31160	25142	26983	0	112202	0.25	0.29	0.21	0.25	0	0.46	0.8878	0.2234	0.8142	1.9535	0	1	0	1	11	16	20	24	71	0.15	0.23	0.28	0.34	0	0.62	0.887	0.2761	0.7604	1.9451	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3197	4050	709	1754	3558	5530	3464	1472	3252	3488	1449	3125	2306	1407	1673	2390	2001	4139	2600	1664	7059	1472	3368	2250	5717	2859	869	1786	871	3470	2700	1774	1775	768	2927	2935	2904	3988	1677	4524	4219	1919	2789	3496	3362	1292	3073	3009	1863	1849	1037	1869	723	3227	3314	3767	349	2063	1978	851	2515	499	2266	928
GCF_012460135.2	NC_050499	NC_050499.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 22; BPBGC_Mater_1.1; whole genome shotgun sequence.	2099941	2144972	2071988	2087691	1200	8405792	0.25	0.26	0.25	0.25	0	0.49	0.9369	0.0144	0.9857	1.9998	112	83	195	1170175	1310370	1185297	1273193	500	4939535	0.22	0.24	0.26	0.27	0.53	0.9083	0.1131	0.8955	1.9783	9412	88	70	158	59618	48348	79183	76599	263748	0.24	0.19	0.29	0.29	0.58	0.8533	0.3265	0.7408	1.9289	0	643704	734299	647014	696876	300	2722193	0.22	0.27	0.25	0.27	0	0.52	0.8691	0.2522	0.791	1.9474	15	3	18	4864	4833	4714	4612	19023	0.27	0.23	0.25	0.25	0	0.5	0.863	0.2658	0.7816	1.9598	0	59803	63454	48873	51192	0	223322	0.27	0.27	0.22	0.23	0	0.46	0.8936	0.1948	0.8358	1.9735	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1580	2020	292	1022	2098	2955	1923	586	2010	2067	573	1334	1481	990	892	1280	1111	2086	1363	684	3628	725	1902	991	3101	1843	430	763	339	1888	1465	812	1007	291	1609	1581	1534	2596	917	2541	2464	1240	1155	2166	1963	581	1842	1607	966	856	669	1171	236	1878	1926	2212	153	1219	1197	494	1148	176	1208	627
GCF_012460135.2	NC_050500	NC_050500.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 23; BPBGC_Mater_1.1; whole genome shotgun sequence.	2116798	2108563	2007587	1991868	600	8225416	0.26	0.26	0.24	0.24	0	0.49	0.9389	0.0059	0.9941	1.9994	126	144	270	1313818	1480680	1274226	1394463	200	5463387	0.23	0.25	0.25	0.27	0.51	0.9091	0.1237	0.8865	1.9802	2520	108	123	231	90749	75178	118690	119620	404237	0.23	0.19	0.28	0.29	0.58	0.8529	0.311	0.7505	1.9239	0	949197	1093431	883511	975778	100	3902017	0.23	0.27	0.24	0.26	0	0.5	0.8668	0.2649	0.7835	1.9424	8	4	12	6227	6468	5552	5784	24031	0.26	0.24	0.25	0.25	0	0.5	0.8715	0.2046	0.8263	1.9562	0	7786	8187	6247	6859	0	29079	0.27	0.29	0.23	0.22	0	0.45	0.8805	0.2574	0.7872	1.957	0	1	0	1	11	16	20	27	74	0.15	0.22	0.27	0.36	0	0.64	0.8809	0.3341	0.7141	1.9274	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2419	3073	548	1407	3120	4455	2954	1051	2807	3100	1050	2135	1972	1527	1345	1899	1659	3419	2099	1212	5673	1247	2709	1550	4687	2625	627	1219	557	3059	2171	1268	1431	555	2126	2378	2435	3616	1396	4196	3513	1914	1932	3320	2993	908	2932	2332	1556	1337	1012	2031	480	2742	2786	3170	249	2145	2144	862	1784	390	1854	838
GCF_012460135.2	NC_050501	NC_050501.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 24; BPBGC_Mater_1.1; whole genome shotgun sequence.	1764810	1805851	1875682	1901980	400	7348723	0.24	0.25	0.26	0.26	0	0.51	0.9331	0.0185	0.9817	1.9993	136	121	257	863488	976048	938617	1025075	300	3803528	0.21	0.24	0.26	0.28	0.55	0.9055	0.1249	0.8853	1.9716	2994	118	101	219	70780	55137	94724	95010	315651	0.24	0.18	0.28	0.3	0.59	0.8488	0.35	0.7255	1.9116	0	503379	587825	528510	582349	300	2202363	0.21	0.26	0.26	0.28	0	0.53	0.8627	0.2662	0.7814	1.9375	14	11	25	9363	10701	8558	9597	38219	0.23	0.22	0.26	0.29	0	0.55	0.8565	0.3056	0.7601	1.9302	0	3840	5024	4641	5063	0	18568	0.19	0.28	0.24	0.29	0	0.53	0.8704	0.3414	0.7284	1.9378	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1836	2722	378	943	2293	3829	2116	712	2308	2409	689	1659	1518	1178	937	1494	1111	2527	1724	789	4223	987	2158	1247	3771	2052	455	865	387	2424	1795	861	1174	339	1669	1976	1809	3378	1130	3323	2923	1539	1585	2895	2158	642	2473	1814	1027	886	866	1554	310	2069	2315	2593	186	1761	1907	573	1270	198	1266	646
GCF_012460135.2	NC_050502	NC_050502.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 25; BPBGC_Mater_1.1; whole genome shotgun sequence.	1720553	1718982	1874109	1866717	300	7180661	0.24	0.24	0.26	0.26	0	0.52	0.9352	0.0024	0.9976	1.9987	141	133	274	1090264	1214498	1211345	1294627	100	4810834	0.22	0.24	0.26	0.28	0.54	0.9041	0.1229	0.888	1.979	0	128	117	245	87439	71123	119506	119030	397098	0.23	0.18	0.29	0.3	0.58	0.8528	0.3202	0.745	1.9251	0	718998	821012	766319	827417	100	3133846	0.21	0.25	0.26	0.28	0	0.54	0.8633	0.2677	0.7813	1.9439	6	9	15	6573	7658	6529	7469	28229	0.23	0.25	0.24	0.27	0	0.52	0.8605	0.2549	0.7915	1.9441	0	20703	21869	16663	18338	0	77573	0.25	0.29	0.2	0.25	0	0.46	0.8703	0.3217	0.7467	1.9229	0	2	1	3	42	50	56	70	218	0.19	0.23	0.26	0.32	0	0.58	0.9006	0.1949	0.8257	1.9722	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2643	3324	415	1268	2826	4970	2786	822	2996	3007	768	1877	1841	1543	1203	2119	1480	3705	2327	951	6030	1093	2728	1504	4850	2760	504	1172	401	2677	2493	962	1544	328	2149	2576	2297	4046	1496	4262	3660	1860	1643	3282	2851	757	3106	2080	1334	1259	1048	1758	336	2632	2972	3203	194	2064	2030	687	1522	212	1688	783
GCF_012460135.2	NC_050503	NC_050503.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 26; BPBGC_Mater_1.1; whole genome shotgun sequence.	1434648	1427013	1620528	1603975	500	6086664	0.24	0.23	0.27	0.26	0	0.53	0.9372	0.0078	0.9922	1.9974	162	148	310	889538	1008437	1031996	1114593	100	4044664	0.2	0.23	0.28	0.29	0.57	0.8978	0.1318	0.8798	1.9612	6	140	130	270	91209	71567	129039	129736	421551	0.23	0.18	0.29	0.3	0.59	0.849	0.3339	0.736	1.9109	0	552163	657130	609872	668758	100	2488023	0.2	0.25	0.27	0.29	0	0.55	0.8549	0.2928	0.7634	1.9239	10	10	20	8347	8612	8148	8832	33939	0.24	0.22	0.27	0.27	0	0.54	0.8483	0.3208	0.7466	1.9212	6	10858	12851	12732	13822	0	50263	0.23	0.28	0.25	0.25	0	0.49	0.8688	0.2571	0.7934	1.945	0	2	2	4	56	68	76	92	292	0.19	0.23	0.26	0.31	0	0.58	0.8806	0.208	0.8185	1.9706	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2358	3280	448	1250	3126	5132	3093	791	2946	3202	871	2100	1843	1841	1294	1972	1435	3454	2024	912	5876	1229	2835	1616	4756	2873	647	1031	475	3203	2234	1113	1563	369	2126	2695	2467	4554	1418	4738	3985	2358	1752	3976	2857	809	3465	2255	1273	1358	1287	2512	359	3025	3092	3041	163	2667	2636	877	1799	234	1715	1076
GCF_012460135.2	NC_050504	NC_050504.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 27; BPBGC_Mater_1.1; whole genome shotgun sequence.	1400860	1412444	1575294	1594421	300	5983319	0.23	0.24	0.26	0.27	0	0.53	0.9346	0.0102	0.9899	1.9974	166	163	329	974975	1082498	1126464	1175307	100	4359344	0.2	0.23	0.28	0.29	0.57	0.8955	0.1465	0.869	1.9597	9109	144	139	283	88881	72724	131820	128732	422157	0.22	0.18	0.3	0.3	0.6	0.8481	0.3344	0.7349	1.9094	0	610511	697697	680822	717674	100	2706804	0.19	0.24	0.28	0.29	0	0.57	0.8493	0.2987	0.7598	1.9152	10	4	14	3788	3906	3797	4093	15584	0.25	0.2	0.25	0.31	0	0.56	0.8547	0.4023	0.6964	1.9058	0	44654	47688	39937	40139	0	172418	0.21	0.29	0.23	0.27	0	0.5	0.8658	0.3667	0.7154	1.9317	0	2	10	12	176	202	217	273	868	0.2	0.23	0.25	0.32	0	0.57	0.8784	0.1806	0.8372	1.9779	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2408	3303	388	1238	2864	5363	2999	854	3270	2886	839	1941	1724	1640	1147	2145	1474	3704	2365	1016	6051	1418	2994	1499	4790	3045	501	1004	467	2863	2571	1032	1678	371	1975	2898	2483	5021	1736	4790	4167	2548	1635	4236	3097	787	3432	1901	1279	1208	1271	2377	353	2612	2964	2974	167	2519	2630	806	1570	210	1494	967
GCF_012460135.2	NC_050505	NC_050505.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 28; BPBGC_Mater_1.1; whole genome shotgun sequence.	1323664	1312401	1386937	1389632	700	5413334	0.24	0.24	0.26	0.26	0	0.51	0.9304	0.0052	0.9948	1.9994	114	112	226	710605	792645	809836	851731	300	3165117	0.21	0.23	0.28	0.29	0.57	0.8927	0.1369	0.8762	1.9635	28710	99	99	198	68365	54982	103354	100412	327113	0.22	0.18	0.3	0.31	0.61	0.846	0.325	0.7424	1.9054	0	501831	578279	534365	576050	100	2190625	0.2	0.24	0.27	0.29	0	0.56	0.8415	0.3296	0.7404	1.9133	9	1	10	1813	1916	2051	2334	8114	0.23	0.21	0.26	0.3	0	0.56	0.8528	0.3049	0.7606	1.9247	0	3755	3367	3203	3322	0	13647	0.21	0.25	0.24	0.29	0	0.54	0.8583	0.3417	0.732	1.9306	0	0	1	1	10	17	21	23	71	0.14	0.24	0.3	0.32	0	0.62	0.887	0.3047	0.7506	1.9387	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1776	2282	282	964	2391	3909	2289	673	2379	2394	589	1400	1306	1383	927	1809	1069	2769	1657	753	4742	962	2187	1218	3364	2579	390	711	315	2453	1966	763	1225	231	1636	2182	1911	4113	1237	3761	3178	2038	1133	3166	2419	584	2833	1574	974	1008	1031	1881	234	2166	2473	2351	124	2090	2121	711	1266	139	1204	762
GCF_012460135.2	NC_050506	NC_050506.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 29; BPBGC_Mater_1.1; whole genome shotgun sequence.	797730	791021	985407	990611	500	3565269	0.22	0.22	0.28	0.28	0	0.55	0.9222	0.0069	0.9932	1.9914	155	163	318	478625	542076	652562	686374	200	2359837	0.18	0.21	0.3	0.31	0.61	0.8769	0.1826	0.8414	1.9372	499	135	126	261	70098	58002	118804	118064	364968	0.2	0.16	0.32	0.32	0.64	0.8414	0.3315	0.7372	1.8913	0	278922	335425	345560	374333	200	1334440	0.18	0.23	0.29	0.3	0	0.59	0.8234	0.3986	0.696	1.8881	2	11	13	3058	3942	3670	3757	14427	0.24	0.2	0.27	0.29	0	0.56	0.8575	0.3569	0.7211	1.9306	0	3229	3688	3443	4683	0	15043	0.19	0.34	0.19	0.27	0	0.47	0.8707	0.4505	0.6544	1.9312	0	1	1	2	30	27	39	50	146	0.21	0.18	0.27	0.34	0	0.61	0.8839	0.2821	0.7559	1.9499	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1874	2498	267	883	2272	4414	2614	509	3174	2722	485	1307	1479	1670	973	1549	1233	3041	1664	642	4914	1275	2326	1208	3943	2679	390	638	259	2801	1863	742	1487	151	1490	2364	2131	4925	1195	4545	3753	2532	1031	4047	3086	556	3955	1609	1091	881	1263	2363	156	2480	2854	2684	76	2854	2951	800	1149	116	1261	927
GCF_012460135.2	NC_050507	NC_050507.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 30; BPBGC_Mater_1.1; whole genome shotgun sequence.	646922	655831	864379	880242	600	3047974	0.21	0.22	0.28	0.29	0	0.57	0.9275	0.0159	0.9842	1.9846	98	111	209	448248	509446	637753	677459	200	2273106	0.19	0.21	0.3	0.31	0.61	0.883	0.1485	0.8683	1.9432	265	79	98	177	56610	47725	97842	96043	298220	0.2	0.16	0.32	0.32	0.64	0.8428	0.3351	0.7345	1.8896	0	268756	324053	356097	389913	100	1338919	0.18	0.22	0.3	0.31	0	0.6	0.8214	0.4188	0.6829	1.8757	7	4	11	1802	1772	1940	2044	7558	0.24	0.21	0.28	0.28	0	0.55	0.8503	0.3484	0.7313	1.9162	0	1300	1196	805	1704	0	5005	0.21	0.26	0.23	0.3	0	0.53	0.8391	0.4583	0.6516	1.9021	0	0	1	1	15	19	21	27	82	0.18	0.23	0.26	0.33	0	0.59	0.8987	0.2426	0.7836	1.9681	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1370	2157	206	737	1934	4044	2251	409	2108	2156	384	1026	1063	1394	620	1512	866	2751	1679	559	4931	1009	2132	929	3196	2348	307	569	198	1996	1758	559	1201	114	1103	2187	1826	3902	1070	4239	2776	2108	841	3183	2062	523	2985	1083	824	758	1015	2140	98	1818	1935	1994	60	2239	2275	701	909	86	877	781
GCF_012460135.2	NC_071658	NC_071658.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 31; BPBGC_Mater_1.1; whole genome shotgun sequence.	429401	424165	458781	457122	3000	1772469	0.24	0.24	0.26	0.26	0	0.52	0.9198	0.0079	0.9921	1.9981	22	19	41	232957	235591	226442	228816	1500	925306	0.23	0.25	0.26	0.26	0.52	0.9012	0.1033	0.906	1.9657	0	14	10	24	8358	5648	8358	8659	31023	0.34	0.19	0.21	0.26	0.47	0.8385	0.5032	0.6246	1.8764	0	116956	121925	108502	112155	1500	461038	0.25	0.3	0.22	0.24	0	0.46	0.867	0.2504	0.7917	1.9126	3	3	6	3259	3097	3172	3198	12726	0.23	0.23	0.25	0.29	0	0.54	0.8731	0.2921	0.7588	1.9509	0	3400	3707	3459	3783	0	14349	0.22	0.25	0.24	0.29	0	0.53	0.8697	0.2924	0.7635	1.951	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	3	4	7	1504	1445	2046	2364	7359	0.22	0.23	0.27	0.29	0	0.56	0.9029	0.0742	0.9296	1.986	194	381	48	152	232	372	200	101	181	119	199	397	129	63	100	140	126	223	174	117	401	63	242	126	345	129	36	114	71	167	130	134	87	65	176	160	176	306	65	288	246	167	392	262	180	77	193	195	91	74	69	143	66	128	221	154	9	169	185	48	139	28	74	48
GCF_012460135.2	NC_071659	NC_071659.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 32; BPBGC_Mater_1.1; whole genome shotgun sequence.	360545	369140	445046	451953	1000	1627684	0.22	0.23	0.27	0.28	0	0.55	0.925	0.0195	0.9807	1.9919	38	37	75	257752	294371	331945	357392	0	1241460	0.19	0.22	0.29	0.31	0.6	0.8809	0.1635	0.8544	1.947	44	29	27	56	24088	19184	34780	35675	113727	0.21	0.17	0.3	0.32	0.62	0.844	0.3366	0.7359	1.8947	0	196977	227978	244048	267279	0	936282	0.18	0.22	0.29	0.31	0	0.6	0.8349	0.3231	0.7435	1.9074	9	5	14	2074	2502	2696	2996	10268	0.2	0.24	0.26	0.3	0	0.56	0.8683	0.2602	0.7883	1.9395	0	1472	1784	1475	1609	0	6340	0.24	0.3	0.22	0.23	0	0.45	0.8731	0.1968	0.8303	1.9543	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	669	1041	128	273	800	1608	797	254	752	798	215	627	367	437	259	580	387	1029	633	303	1821	284	788	497	1311	699	144	259	117	801	683	320	440	99	487	866	641	1170	423	1454	1083	736	498	1137	809	206	924	477	282	350	290	680	71	680	716	670	21	796	761	257	442	23	287	261
GCF_012460135.2	NC_071660	NC_071660.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 33; BPBGC_Mater_1.1; whole genome shotgun sequence.	319471	315442	348728	348475	400	1332516	0.24	0.24	0.26	0.26	0	0.52	0.9229	0.0067	0.9933	1.9982	30	20	50	94909	103786	112903	111962	0	423560	0.21	0.23	0.28	0.28	0.57	0.9002	0.149	0.8664	1.9665	2752	21	13	34	9282	7050	12558	13923	42813	0.19	0.17	0.3	0.34	0.64	0.8443	0.3062	0.753	1.8976	0	31789	36765	42230	39229	0	150013	0.18	0.22	0.3	0.31	0	0.6	0.8338	0.416	0.6826	1.8943	8	5	13	6944	7007	6462	7168	27581	0.22	0.22	0.27	0.29	0	0.56	0.8577	0.3001	0.7533	1.9255	0	15426	17871	16375	15219	0	64891	0.2	0.23	0.29	0.28	0	0.57	0.8714	0.2566	0.7968	1.9143	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	214	290	21	173	236	524	316	63	388	413	115	184	208	171	159	141	145	299	185	82	527	144	204	153	429	329	33	107	42	426	197	79	108	35	247	209	321	536	82	433	500	211	179	368	261	56	571	404	313	92	130	230	22	237	411	351	5	280	201	66	114	18	176	71
GCF_012460135.2	NC_071661	NC_071661.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 34; BPBGC_Mater_1.1; whole genome shotgun sequence.	313403	318670	327127	332521	1500	1293221	0.24	0.25	0.25	0.26	0	0.51	0.919	0.0165	0.9836	1.999	10	12	22	38600	40689	41599	41450	500	162838	0.2	0.26	0.31	0.23	0.54	0.8749	0.2989	0.7505	1.9705	0	9	8	17	3402	4113	5578	4061	17154	0.23	0.21	0.29	0.27	0.56	0.8467	0.3417	0.7249	1.9476	0	12304	12965	12680	13212	0	51161	0.23	0.25	0.27	0.25	0	0.51	0.8977	0.1844	0.8415	1.9777	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	122	103	31	78	109	120	153	43	236	69	66	57	65	42	36	97	49	140	201	133	391	27	279	37	173	93	14	55	33	94	200	53	57	15	53	75	221	158	113	216	131	34	87	135	162	64	71	53	91	51	23	24	18	84	118	91	1	50	23	7	31	17	23	12
GCF_012460135.2	NC_071662	NC_071662.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 35; BPBGC_Mater_1.1; whole genome shotgun sequence.	309154	304353	328415	331104	3500	1276526	0.24	0.24	0.26	0.26	0	0.52	0.9134	0.0119	0.9882	1.9975	19	16	35	81613	82136	88793	87230	1000	340772	0.2	0.25	0.31	0.23	0.55	0.8717	0.3105	0.7432	1.9639	0	13	9	22	4945	5749	7247	5465	23406	0.23	0.23	0.29	0.26	0.54	0.8416	0.3594	0.7129	1.9402	0	11832	12533	11418	11706	0	47489	0.25	0.28	0.24	0.24	0	0.48	0.8994	0.1697	0.8511	1.9818	2	3	5	2429	2367	2924	2644	10364	0.22	0.22	0.28	0.28	0	0.56	0.8825	0.2257	0.8114	1.9665	0	7299	6964	7806	7702	500	30271	0.3	0.29	0.15	0.26	0	0.41	0.8635	0.3048	0.7652	1.7863	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	184	153	42	99	161	97	204	65	321	122	94	104	114	74	83	148	76	178	256	184	523	54	346	53	228	133	31	94	56	124	271	76	76	27	86	103	243	177	133	292	163	34	119	189	199	71	80	99	111	66	34	14	35	103	155	121	36	52	35	13	52	51	57	15
GCF_012460135.2	NC_071663	NC_071663.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 36; BPBGC_Mater_1.1; whole genome shotgun sequence.	196984	198047	276832	279704	3500	955067	0.21	0.21	0.29	0.29	0	0.58	0.8942	0.0079	0.9922	1.9771	40	42	82	147342	162669	232291	233906	2000	778208	0.18	0.2	0.3	0.32	0.62	0.8639	0.1901	0.8347	1.9242	283	31	38	69	21551	17202	42051	40969	121773	0.18	0.15	0.33	0.33	0.67	0.8326	0.36	0.7204	1.8574	0	102706	122286	152871	158107	1500	537470	0.16	0.21	0.3	0.32	0	0.63	0.7842	0.5369	0.6106	1.8326	8	2	10	1858	1972	1887	2015	7732	0.22	0.19	0.3	0.28	0	0.59	0.8543	0.4111	0.6909	1.8985	0	2158	2120	1608	2020	0	7906	0.19	0.33	0.22	0.27	0	0.49	0.8411	0.5303	0.609	1.9024	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	496	832	83	192	638	1678	771	119	894	786	134	367	379	684	194	521	236	1007	773	130	1655	384	886	308	1079	905	112	112	35	887	658	227	460	20	334	896	799	1866	457	1675	1179	1278	270	1486	893	168	1378	397	236	302	479	1218	26	663	834	769	10	1275	1258	369	406	22	301	457
GCF_012460135.2	NC_071664	NC_071664.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 37; BPBGC_Mater_1.1; whole genome shotgun sequence.	160871	155424	180844	186511	2500	686150	0.23	0.23	0.26	0.27	0	0.54	0.9289	0.0326	0.9679	1.9938	11	6	17	56232	58683	78268	81705	500	275388	0.2	0.21	0.27	0.32	0.59	0.8677	0.196	0.8318	1.945	0	8	5	13	3318	2609	5670	5878	17475	0.18	0.14	0.33	0.35	0.68	0.8213	0.3697	0.7164	1.838	0	27812	32152	39677	43135	0	142776	0.18	0.21	0.29	0.32	0	0.61	0.7758	0.5732	0.5866	1.8584	1	1	2	292	247	400	391	1330	0.2	0.15	0.35	0.29	0	0.64	0.823	0.3294	0.7455	1.8527	0	2156	2282	2296	2569	0	9303	0.22	0.2	0.22	0.36	0	0.58	0.8238	0.4041	0.6899	1.9205	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	94	72	16	41	135	238	98	23	110	143	43	36	88	99	53	65	44	140	93	35	252	39	82	57	194	151	11	40	7	129	91	28	45	19	115	94	83	266	52	213	147	179	46	184	119	25	242	111	45	23	64	145	19	94	130	105	0	180	165	29	38	2	46	28
GCF_012460135.2	NC_071665	NC_071665.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 38; BPBGC_Mater_1.1; whole genome shotgun sequence.	132287	134183	136354	133466	500	536790	0.25	0.25	0.25	0.25	0	0.5	0.9341	0.0178	0.9823	1.9994	6	11	17	32553	33672	33568	37335	0	137128	0.22	0.23	0.27	0.28	0.56	0.8973	0.2004	0.8245	1.9605	0	4	10	14	4208	3313	5726	5869	19116	0.23	0.19	0.28	0.3	0.58	0.8478	0.2837	0.773	1.9325	0	25316	26961	24388	26713	0	103378	0.22	0.26	0.24	0.28	0	0.52	0.8771	0.2139	0.8158	1.9765	1	0	1	131	144	95	92	462	0.27	0.26	0.24	0.22	0	0.46	0.8725	0.1627	0.8564	1.9577	0	119	140	117	144	0	520	0.23	0.27	0.23	0.28	0	0.5	0.8663	0.1845	0.8313	1.9937	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	78	141	34	49	169	288	151	43	76	121	60	113	78	43	37	87	71	151	105	50	289	55	177	68	282	75	36	69	21	143	103	59	79	31	85	115	119	177	57	221	172	149	109	154	101	42	164	96	47	62	45	59	40	132	146	125	8	131	171	22	67	11	52	30
GCF_012460135.2	NC_071666	NC_071666.1	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome 39; BPBGC_Mater_1.1; whole genome shotgun sequence.	116134	121251	147174	148612	3000	536171	0.22	0.23	0.27	0.28	0.01	0.55	0.9174	0.0264	0.9741	1.9881	32	28	60	69423	80088	105713	109579	1500	366303	0.18	0.22	0.29	0.31	0.6	0.8727	0.1859	0.8387	1.9428	0	17	18	35	7256	5977	15446	15496	44175	0.19	0.14	0.33	0.34	0.67	0.8273	0.3828	0.709	1.8482	0	30567	36241	36939	39897	500	144144	0.2	0.23	0.28	0.29	0	0.57	0.7977	0.5246	0.6188	1.8526	0	3	3	278	298	388	419	1383	0.21	0.19	0.29	0.31	0	0.6	0.8637	0.1845	0.8422	1.945	0	113	199	128	195	0	635	0.18	0.31	0.2	0.31	0	0.51	0.861	0.4803	0.6407	1.9244	0	11	5	16	207	269	327	391	1194	0.18	0.23	0.27	0.33	0	0.6	0.8759	0.261	0.7818	1.9464	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	163	186	20	90	198	643	269	54	278	351	36	151	129	234	66	170	123	346	203	68	650	126	290	101	415	330	30	50	10	305	184	59	114	5	124	337	267	772	103	678	381	492	96	548	315	58	637	154	87	73	186	519	15	285	303	270	2	510	501	118	133	5	115	122
GCF_012460135.2	NC_050510	NC_050510.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome W; BPBGC_Mater_1.1; whole genome shotgun sequence.	3273108	3239999	2627407	2632566	100	11773180	0.28	0.28	0.22	0.22	0	0.45	0.942	0.0061	0.994	1.9918	47	35	82	868628	927581	686637	695317	0	3178163	0.27	0.28	0.22	0.23	0.45	0.9249	0.1174	0.8928	1.9814	0	24	22	46	24170	18890	17410	19156	79626	0.31	0.24	0.21	0.24	0.45	0.8642	0.3154	0.7463	1.9451	0	590671	643716	467978	470508	0	2172873	0.29	0.33	0.18	0.2	0	0.38	0.8974	0.1682	0.8515	1.9342	18	12	30	22571	21011	17499	18263	79344	0.26	0.25	0.24	0.25	0	0.49	0.8885	0.2537	0.7892	1.9587	0	29579	30799	22913	23222	0	106513	0.27	0.28	0.22	0.23	0	0.45	0.9054	0.1818	0.8439	1.9638	0	4	0	4	52	71	76	92	291	0.18	0.24	0.26	0.32	0	0.58	0.885	0.2508	0.788	1.9646	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	685	816	290	406	555	727	503	513	403	481	513	887	485	107	328	468	477	443	383	461	630	273	388	635	753	396	333	461	313	538	410	434	286	392	550	483	297	336	199	360	375	108	940	315	313	382	328	644	343	352	158	136	352	448	421	584	177	183	152	132	561	220	292	134
GCF_012460135.2	NC_050511	NC_050511.2	Molothrus ater isolate BHLD 08-10-18 breed brown headed cowbird chromosome Z; BPBGC_Mater_1.1; whole genome shotgun sequence.	21091038	21084353	13976901	13954509	900	70107701	0.3	0.3	0.2	0.2	0	0.4	0.9466	0.001	0.999	1.97	389	400	789	9541023	10522562	6290649	6929706	300	33284240	0.27	0.29	0.21	0.23	0.44	0.9195	0.1259	0.886	1.9625	4567	346	349	695	368194	305500	306225	328143	1308062	0.29	0.24	0.22	0.25	0.47	0.863	0.307	0.7521	1.9407	0	6936282	7774919	4497480	4980391	300	24189372	0.28	0.33	0.19	0.21	0	0.4	0.893	0.183	0.8405	1.9376	37	34	71	30625	30351	22169	22537	105682	0.28	0.25	0.22	0.25	0	0.47	0.8662	0.2827	0.7721	1.9411	0	321304	326851	210133	212159	0	1070447	0.27	0.3	0.21	0.22	0	0.42	0.8961	0.1734	0.8544	1.9475	0	0	1	1	14	18	19	21	72	0.19	0.25	0.26	0.29	0	0.56	0.9099	0.175	0.8413	1.9851	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10522	12066	3734	6525	8986	11217	8258	7157	6551	8341	7408	12201	7808	2418	6234	7142	7019	9011	7293	7514	14208	4063	7249	8162	13436	5890	3752	7389	4646	8810	6635	6881	4756	4831	9223	6796	6658	5900	5251	7937	8748	3123	12288	6695	7240	5421	5410	10210	6113	6026	1892	3141	4431	7236	6707	8501	2191	3072	3271	1827	8246	3136	6837	2106
NA	NC_051468	NC_051468.1	Molothrus ater mitochondrion; complete genome.	5095	3909	5367	2387	0	16758	0.3	0.23	0.32	0.14	0	0.46	0.9278	0.516	0.606	1.9386	28	9	37	4538	3750	4754	2470	0	15512	0.29	0.27	0.25	0.19	0.44	0.8846	0.4159	0.6852	1.9303	21	8	1	9	2165	1951	2522	1204	7842	0.27	0.26	0.32	0.16	0.48	0.8791	0.6243	0.5685	1.8907	10	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	14	8	22	465	433	308	334	1540	0.3	0.28	0.2	0.22	0	0.42	0.8831	0.3036	0.7508	1.9473	1	2	0	2	856	533	672	515	2576	0.33	0.21	0.26	0.2	0	0.47	0.9135	0.3653	0.694	1.9685	25	0	59	25	58	18	22	57	63	4	8	44	59	7	8	87	23	24	133	33	33	20	104	11	5	88	218	15	14	69	136	38	47	75	86	47	49	51	62	112	33	11	57	50	18	32	30	1	4	13	7	13	43	18	2	75	1	5	8	6	55	5	63	27