GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_N Number of 'N' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_011077185.1	NC_048893	NC_048893.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 1; BPBGC_Ojam_1.0; whole genome shotgun sequence.	59759523	59925212	39599022	39730995	5610379	204625131	0.29	0.29	0.19	0.19	0.03	0.39	0.9495	0.003	0.997	1.9551	1558	1493	3051	32991761	35698736	22084596	23846221	1123220	115744534	0.28	0.29	0.21	0.22	0	0.43	0.9226	0.1031	0.9045	1.9654	282790	1010	932	1942	1013507	833007	822620	877785	70	3546989	0.29	0.24	0.22	0.25	0.47	0.8644	0.3165	0.7464	1.9397	0	22439249	24762943	14711334	16036601	693440	78643567	0.28	0.32	0.19	0.21	0	0.4	0.8972	0.1723	0.8494	1.9397	0	529	515	1044	370308	366486	263976	274278	0	1275048	0.29	0.27	0.21	0.23	0	0.43	0.8543	0.366	0.7318	1.8702	1	3394225	3460552	2218441	2260714	102710	11436642	0.29	0.31	0.2	0.21	0	0.4	0.8998	0.1563	0.8661	1.9466	0	24	23	47	609	800	907	1175	3491	0.17	0.23	0.26	0.34	0	0.6	0.8875	0.2768	0.7621	1.9546	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	28669	34241	10883	17603	23496	30037	21681	18689	17724	22245	20110	34015	20873	8088	16134	20277	19440	23291	20943	20710	36175	11061	19682	20955	35864	16360	11765	20479	12961	23005	18305	19388	13349	13994	24225	18318	16673	15791	14694	19507	23063	7898	35493	16950	18802	14857	14274	27414	15713	16483	5992	8529	12716	19080	18062	22277	6557	8782	8500	5832	23593	8972	18008	6434
GCF_011077185.1	NC_048894	NC_048894.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 2; BPBGC_Ojam_1.0; whole genome shotgun sequence.	46836787	46683010	30623837	30505361	3627502	158276497	0.3	0.29	0.19	0.19	0.02	0.39	0.9496	0.0036	0.9964	1.9557	997	1062	2059	24059607	26158838	15739228	17104573	709382	83771628	0.28	0.3	0.2	0.22	0.01	0.42	0.9227	0.1015	0.9055	1.9613	53349	607	652	1259	699330	567571	551991	598098	0	2416990	0.3	0.24	0.22	0.25	0.46	0.8637	0.3154	0.7471	1.9387	0	16653650	18449221	10724941	11753764	509952	58091528	0.28	0.33	0.19	0.2	0	0.39	0.8974	0.1662	0.8541	1.9318	21676	380	386	766	292074	289347	202840	213641	10	997912	0.3	0.28	0.2	0.23	0	0.43	0.8586	0.3493	0.7414	1.8844	0	2343978	2399094	1511908	1531188	70660	7856828	0.29	0.31	0.19	0.2	0	0.4	0.8972	0.1667	0.8595	1.9424	0	11	16	27	420	454	493	645	2012	0.21	0.23	0.24	0.32	0	0.56	0.8772	0.2431	0.7907	1.9704	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	19592	23627	7703	12233	16244	20717	14892	13587	11803	14140	14204	23802	14127	5257	11165	14134	12776	15862	13817	14653	23598	7774	12650	14435	24297	10683	7867	13756	9166	15947	12433	13238	8777	9923	16750	12615	11168	10305	10003	13096	15960	5422	25300	11801	12315	10557	9757	18711	10655	10990	4171	5895	9086	12628	12567	14851	4374	6028	5908	3793	15713	6184	11707	4389
GCF_011077185.1	NC_048895	NC_048895.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 3; BPBGC_Ojam_1.0; whole genome shotgun sequence.	34833248	34982333	23200307	23304829	2220200	118540917	0.29	0.3	0.2	0.2	0.02	0.39	0.9505	0.0044	0.9956	1.9607	971	874	1845	19623271	21407473	13092346	14291583	420920	68835593	0.27	0.29	0.21	0.22	0	0.43	0.923	0.1039	0.9032	1.9654	129031	587	553	1140	646895	528660	518707	564082	13	2258357	0.29	0.24	0.22	0.25	0.47	0.8636	0.3125	0.7492	1.9381	0	13397070	14937789	8683905	9586980	287847	46893591	0.27	0.32	0.19	0.21	0	0.4	0.8947	0.1791	0.8441	1.9306	35634	367	296	663	261710	259216	184988	196885	0	902799	0.3	0.27	0.21	0.23	0	0.43	0.8613	0.3344	0.7488	1.8911	9	2132437	2206228	1455566	1502848	34910	7331989	0.29	0.31	0.2	0.21	0	0.4	0.8984	0.1623	0.8608	1.9475	0	8	11	19	286	302	368	458	1414	0.2	0.22	0.26	0.32	0	0.58	0.8791	0.2522	0.7846	1.9623	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18002	21657	7053	11206	15009	19915	14083	11982	10769	13829	12494	22037	12756	4955	10388	12822	12127	14897	12617	13314	22954	7191	12118	13782	22796	10003	7649	12975	8259	15138	11268	12586	8078	9034	15003	12119	10450	9801	8947	12513	14876	5335	23172	11068	12135	9880	8756	17399	9810	10478	3859	5765	8247	12116	11571	13656	4189	5826	5526	3776	14956	5991	11767	4072
GCF_011077185.1	NC_048896	NC_048896.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 4; BPBGC_Ojam_1.0; whole genome shotgun sequence.	28412622	28543671	19113775	19197684	1000740	96268492	0.3	0.3	0.2	0.2	0.01	0.4	0.9509	0.0045	0.9955	1.9666	857	852	1709	16216880	17672676	11066866	12139320	272670	57368412	0.27	0.29	0.21	0.23	0	0.44	0.9218	0.1022	0.9047	1.9627	60618	525	508	1033	526277	428971	447436	480137	68	1882889	0.29	0.23	0.23	0.25	0.48	0.8636	0.3156	0.7475	1.9368	36	9700616	10854398	6547498	7278540	182172	34563224	0.27	0.31	0.2	0.22	0	0.42	0.8936	0.1855	0.839	1.9337	0	324	324	648	273866	271937	194732	205612	0	946147	0.29	0.27	0.21	0.23	0	0.44	0.862	0.3015	0.7674	1.9149	0	2473877	2583574	1585500	1666995	25470	8335416	0.29	0.31	0.19	0.21	0	0.4	0.9013	0.1496	0.8703	1.9464	0	2	3	5	66	92	104	123	385	0.18	0.24	0.27	0.32	0	0.59	0.8687	0.3017	0.7478	1.9542	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14365	17882	5495	8854	12867	16282	11625	9210	9834	11856	10082	17379	10666	4915	8322	10697	9807	12867	10719	10297	19216	5870	10435	10937	18998	8801	5707	10301	6279	12494	9690	9731	7013	6942	12447	10223	9118	9073	7474	11342	13040	4917	18022	9875	10743	7567	8307	14254	8292	8139	3695	5661	6370	10114	10107	11783	3348	5506	5537	3232	11733	4615	9593	3725
GCF_011077185.1	NC_048897	NC_048897.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 5; BPBGC_Ojam_1.0; whole genome shotgun sequence.	18573475	18616503	12985887	12995782	809000	63980647	0.29	0.29	0.2	0.2	0.01	0.41	0.9475	0.0015	0.9985	1.9703	634	659	1293	11779461	12934337	8210871	9016056	185490	42126215	0.27	0.29	0.21	0.23	0	0.44	0.9215	0.1107	0.8972	1.9659	69133	422	430	852	449242	366422	379582	405149	1	1600396	0.29	0.23	0.23	0.25	0.48	0.8632	0.3197	0.7448	1.9381	0	7170473	8098286	4869814	5425169	98199	25661941	0.27	0.32	0.19	0.22	0	0.41	0.8935	0.1872	0.8375	1.935	0	196	216	412	160408	158432	118318	125002	0	562160	0.29	0.26	0.22	0.23	0	0.45	0.8634	0.3086	0.762	1.9153	0	1611325	1674597	1074949	1112032	26110	5499013	0.28	0.3	0.2	0.21	0	0.41	0.8989	0.1639	0.8591	1.9487	0	6	5	11	151	190	211	266	818	0.18	0.23	0.26	0.32	0	0.58	0.879	0.2548	0.7769	1.964	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12203	14941	4732	7728	11012	14654	10462	7838	8195	9821	8752	15573	8915	3677	7212	8994	8750	10656	9187	8679	16771	4850	9186	9770	16233	7438	5265	8721	5471	10648	8218	8476	5905	5744	10515	8652	7690	7599	6363	9543	10585	4223	15585	7991	8877	6533	6745	12034	6949	7299	2754	4330	5280	8842	8586	10048	2636	4725	4204	2688	10204	3597	7867	3040
GCF_011077185.1	NC_048898	NC_048898.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 6; BPBGC_Ojam_1.0; whole genome shotgun sequence.	10598235	10546573	7436979	7376770	187057	36145614	0.29	0.29	0.21	0.2	0.01	0.41	0.9496	0.0065	0.9935	1.9747	343	338	681	7352367	8066943	5042227	5572628	83881	26118046	0.27	0.29	0.21	0.22	0	0.43	0.9239	0.1055	0.9016	1.9682	26364	216	224	440	235106	188979	190966	203860	0	818911	0.29	0.23	0.22	0.25	0.47	0.8654	0.3154	0.7474	1.9402	0	4575780	5138147	3077400	3433371	40760	16265458	0.27	0.32	0.19	0.21	0	0.41	0.8957	0.1788	0.8435	1.9393	0	124	111	235	101451	102309	75621	79626	0	359007	0.28	0.27	0.22	0.24	0	0.46	0.8642	0.2822	0.7796	1.9274	0	1043759	1102078	703917	752946	13350	3616050	0.28	0.31	0.2	0.21	0	0.41	0.9019	0.164	0.8585	1.9506	0	0	1	1	14	17	23	28	82	0.17	0.21	0.28	0.34	0	0.62	0.8987	0.1948	0.8225	1.9498	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6441	7934	2535	3986	5656	6856	5145	4225	3982	5149	4736	7897	4646	1963	3694	4737	4365	5283	4521	4503	8079	2511	4506	4954	8115	3729	2750	4616	2953	5395	4131	4401	2943	3160	5524	4261	3907	3863	3341	4580	5380	1880	8522	4014	4468	3427	3416	6377	3607	3725	1352	2030	2866	4612	4331	5319	1493	2086	2107	1333	5417	2111	4090	1580
GCF_011077185.1	NC_048899	NC_048899.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 7; BPBGC_Ojam_1.0; whole genome shotgun sequence.	11545422	11570359	8095095	8103844	395550	39710270	0.29	0.29	0.2	0.2	0.01	0.41	0.9496	0.0016	0.9984	1.9722	387	373	760	7936443	8654471	5493013	6020786	125170	28229883	0.27	0.29	0.21	0.23	0	0.44	0.9222	0.1035	0.9035	1.9618	43411	228	234	462	310014	252252	251972	273097	12	1087347	0.29	0.23	0.22	0.25	0.48	0.8637	0.3147	0.7482	1.9376	0	4901883	5490120	3340358	3710642	62438	17505441	0.27	0.32	0.2	0.21	0	0.41	0.89	0.1901	0.836	1.927	0	145	134	279	117426	116993	90724	93552	0	418695	0.28	0.26	0.22	0.24	0	0.45	0.863	0.2918	0.776	1.922	0	1054847	1099449	708660	735210	13490	3611656	0.28	0.3	0.2	0.21	0	0.41	0.8991	0.1561	0.8658	1.9518	0	3	2	5	66	88	97	122	373	0.18	0.24	0.26	0.33	0	0.59	0.8769	0.2634	0.7728	1.9581	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9149	10855	3397	5113	7622	8842	6504	5550	5334	6875	5875	9820	6675	2633	5050	6049	5519	7483	5959	5944	11275	3865	5745	5954	10829	4756	3769	6798	3617	7388	5343	5691	3831	4320	7585	5290	5250	5014	4153	5827	7097	2545	10582	5342	5860	4442	4508	8493	4607	5097	1831	2725	4286	5919	5908	7220	2225	2872	2844	1780	7413	3025	5591	1971
GCF_011077185.1	NC_048900	NC_048900.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 8; BPBGC_Ojam_1.0; whole genome shotgun sequence.	9273638	9141265	6722586	6624229	324380	32086098	0.29	0.28	0.21	0.21	0.01	0.42	0.9502	0.0146	0.9855	1.976	374	351	725	6167735	6748735	4486248	4904817	120670	22428205	0.26	0.28	0.22	0.23	0	0.45	0.9225	0.1094	0.8984	1.9657	8544	231	254	485	247072	199279	216299	228766	10	891426	0.28	0.23	0.23	0.26	0.49	0.8618	0.314	0.7479	1.9365	0	3816742	4289242	2731439	3017570	93580	13948573	0.26	0.31	0.2	0.22	0	0.43	0.8902	0.1944	0.8323	1.9338	0	133	95	228	96807	97510	71416	76338	0	342071	0.28	0.26	0.22	0.24	0	0.45	0.8665	0.3223	0.7549	1.9163	0	909107	939264	621153	646698	3070	3119292	0.28	0.3	0.2	0.21	0	0.41	0.9021	0.1573	0.8637	1.9518	0	2	0	2	25	36	37	46	144	0.17	0.24	0.25	0.33	0	0.58	0.8481	0.2894	0.7511	1.9628	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6861	8239	2499	4262	6261	7564	5798	4231	4515	5702	4416	7980	4971	2513	4024	4897	4649	5924	5006	4531	9051	3029	4980	4821	9160	4434	2767	4500	2926	6027	4508	4524	3331	3257	5993	4719	4344	4581	3579	5493	6481	2377	8216	4776	4945	3543	4096	6735	3615	4011	1714	2846	2910	4992	4753	5768	1451	2825	2800	1667	5771	2004	4414	1911
GCF_011077185.1	NC_048901	NC_048901.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 9; BPBGC_Ojam_1.0; whole genome shotgun sequence.	7375458	7305612	5491612	5433508	308360	25914550	0.28	0.28	0.21	0.21	0.01	0.42	0.9512	0.0101	0.99	1.9779	321	288	609	4996819	5485664	3730996	4088421	72270	18374170	0.26	0.28	0.22	0.23	0	0.45	0.9233	0.109	0.8985	1.9706	39425	213	193	406	190138	157574	171170	178259	0	697141	0.28	0.23	0.23	0.26	0.49	0.8637	0.314	0.7482	1.9388	0	2858347	3214404	2111177	2331442	57330	10572700	0.26	0.31	0.21	0.23	0	0.43	0.8913	0.1916	0.8343	1.9361	0	104	88	192	76871	77779	61251	64581	0	280482	0.28	0.26	0.22	0.24	0	0.47	0.8653	0.2921	0.7722	1.9261	0	907834	973432	650990	701607	7760	3241623	0.27	0.3	0.2	0.22	0	0.42	0.903	0.1524	0.8671	1.9584	0	0	2	2	29	33	38	47	147	0.2	0.22	0.26	0.32	0	0.58	0.8778	0.2041	0.8206	1.9695	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5274	6311	1914	3240	4808	6060	4413	3339	3666	4312	3504	6176	3945	2027	2828	4016	3518	4765	4212	3823	7385	2277	4082	3887	7198	3555	2008	3695	2195	4698	3838	3520	2740	2416	4464	3891	3524	3649	2864	4556	4786	1841	6138	3676	4085	2741	3285	5030	2944	3125	1552	2095	2128	4014	3645	4502	1186	2128	2093	1174	4321	1518	3222	1329
GCF_011077185.1	NC_048902	NC_048902.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 10; BPBGC_Ojam_1.0; whole genome shotgun sequence.	6101802	6080152	4625586	4603677	332440	21743657	0.28	0.28	0.21	0.21	0.02	0.42	0.951	0.0042	0.9959	1.9778	281	267	548	4427963	4838287	3296749	3617043	152990	16333032	0.26	0.27	0.22	0.24	0.01	0.46	0.9209	0.108	0.8998	1.9604	59922	180	190	370	204892	163764	180129	192829	10	741624	0.28	0.22	0.23	0.26	0.5	0.8628	0.3184	0.7455	1.9348	0	2746363	3088538	2017887	2238319	64960	10156067	0.26	0.3	0.21	0.23	0	0.44	0.8892	0.1965	0.8312	1.9313	0	93	67	160	81043	81050	64739	66375	0	293207	0.28	0.25	0.23	0.24	0	0.47	0.8703	0.3184	0.7605	1.9045	0	644892	680251	457255	487344	7470	2277212	0.28	0.3	0.21	0.22	0	0.42	0.8983	0.1596	0.8651	1.9467	0	1	5	6	89	89	115	143	436	0.2	0.2	0.26	0.33	0	0.59	0.8937	0.2656	0.7704	1.9556	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5466	6897	2147	3438	5216	6987	4736	3424	3965	4804	3632	7013	4250	2156	3254	4182	3985	5071	4007	3551	7630	2366	3965	4254	7502	3629	2173	3782	2294	4895	3865	3601	2739	2470	4626	4363	3465	3870	2962	4547	5394	2071	6879	4138	4134	2883	3388	5378	3033	3325	1620	2499	2373	4085	3976	4832	1187	2427	2296	1361	4693	1611	3542	1611
GCF_011077185.1	NC_048903	NC_048903.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 11; BPBGC_Ojam_1.0; whole genome shotgun sequence.	6021453	6164061	4388070	4488640	231170	21293394	0.28	0.29	0.21	0.21	0.01	0.42	0.9502	0.023	0.9772	1.9761	271	234	505	3876596	4214874	2911612	3164884	78820	14246786	0.25	0.27	0.23	0.25	0.01	0.47	0.9175	0.1113	0.8971	1.9547	139518	180	162	342	152486	124716	152760	158709	10	588681	0.26	0.22	0.25	0.27	0.52	0.8615	0.2997	0.7578	1.9345	16	1967075	2212434	1464360	1614904	50700	7309473	0.24	0.29	0.23	0.25	0	0.48	0.8839	0.2163	0.8164	1.9266	0	80	63	143	55560	54879	41338	43489	0	195266	0.28	0.26	0.22	0.23	0	0.45	0.8636	0.292	0.7711	1.9168	27	813411	864425	544903	584501	6740	2813980	0.28	0.31	0.2	0.21	0	0.41	0.9035	0.1423	0.8777	1.9491	0	8	5	13	174	223	262	302	961	0.18	0.23	0.27	0.31	0	0.59	0.8874	0.204	0.818	1.9665	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4274	5362	1509	2620	4032	5972	3945	2352	3181	3571	2466	4629	2984	1793	2299	3352	2851	4200	3416	2752	6627	1781	3501	2966	6316	3097	1566	2679	1535	3867	3120	2730	2236	1713	3495	3555	3112	3707	2374	4510	4593	2124	4310	3798	3566	2083	3068	3905	2261	2472	1441	2435	1524	3310	3396	3780	829	2442	2331	1139	3387	1064	2591	1293
GCF_011077185.1	NC_048904	NC_048904.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 12; BPBGC_Ojam_1.0; whole genome shotgun sequence.	6137899	6145673	4675577	4671764	375940	22006853	0.28	0.28	0.21	0.21	0.02	0.42	0.9515	0.001	0.999	1.9772	240	226	466	4311186	4776556	3271284	3605767	86380	16051173	0.26	0.27	0.22	0.24	0.01	0.46	0.9219	0.11	0.8977	1.9658	33716	156	127	283	154271	124457	143558	151555	0	573841	0.27	0.22	0.24	0.27	0.5	0.8626	0.3165	0.7463	1.934	0	2852338	3217639	2077815	2304869	41100	10493761	0.25	0.3	0.22	0.24	0	0.46	0.8887	0.2003	0.8283	1.9333	0	82	90	172	81203	80883	67091	70347	0	299524	0.27	0.25	0.23	0.25	0	0.48	0.873	0.2677	0.7888	1.9389	0	351549	379332	280103	300280	6320	1317584	0.27	0.29	0.21	0.22	0	0.44	0.8996	0.166	0.8563	1.9602	0	1	0	1	18	17	21	27	83	0.22	0.2	0.25	0.33	0	0.58	0.8987	0.1536	0.8611	1.9754	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4255	5602	1440	2549	3885	5646	3564	2566	3071	3519	2732	4848	3066	1761	2293	3343	2670	4200	3288	2779	6282	1685	3160	3059	6177	3039	1616	2851	1788	3822	3292	2710	2357	1757	3570	3503	2920	3359	2556	3840	4214	1790	4733	3464	3421	2048	2877	3898	2265	2282	1228	1935	1676	3035	3131	3589	854	1985	2094	1063	3239	1166	2616	1209
GCF_011077185.1	NC_048905	NC_048905.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 13; BPBGC_Ojam_1.0; whole genome shotgun sequence.	5275398	5316388	4216992	4254117	355380	19418275	0.27	0.27	0.22	0.22	0.02	0.44	0.9515	0.0083	0.9918	1.9808	242	210	452	3237102	3550926	2626614	2867850	49580	12332072	0.25	0.26	0.23	0.25	0.01	0.49	0.9201	0.1141	0.895	1.9644	4707	168	147	315	131291	104892	130822	135020	0	502025	0.27	0.21	0.25	0.27	0.52	0.8601	0.3393	0.7317	1.9301	0	2007889	2269059	1574490	1744524	37790	7633752	0.24	0.29	0.22	0.25	0	0.47	0.8873	0.2098	0.8212	1.9354	0	73	54	127	61958	63328	49897	53971	0	229154	0.27	0.25	0.23	0.25	0	0.48	0.8708	0.2933	0.7728	1.9258	0	402818	425634	326230	341735	1320	1497737	0.26	0.29	0.21	0.23	0	0.44	0.8979	0.1742	0.8514	1.9564	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3601	4716	1150	2095	3416	5086	3275	1884	2982	3168	2058	4003	2671	1648	1958	2848	2501	3541	2752	2165	5416	1479	3130	2725	5282	2733	1357	2310	1316	3400	2759	2198	2044	1359	3044	3164	2591	3408	2040	3562	3957	1698	3861	3087	3062	1646	2753	3470	1860	1914	1262	1760	1225	2879	3017	3412	666	1918	1999	1016	2793	858	2297	1160
GCF_011077185.1	NC_048906	NC_048906.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 14; BPBGC_Ojam_1.0; whole genome shotgun sequence.	4871790	4739662	3950292	3859999	208660	17630403	0.28	0.27	0.22	0.22	0.01	0.44	0.9521	0.0253	0.975	1.9856	244	280	524	3635422	4000774	2889912	3164430	73160	13763698	0.25	0.27	0.23	0.25	0.01	0.48	0.9202	0.109	0.8987	1.9654	57834	183	205	388	187951	156820	182136	188341	0	715248	0.27	0.23	0.24	0.26	0.51	0.8635	0.3	0.7571	1.94	0	2307045	2624408	1790531	1997232	25890	8745106	0.24	0.29	0.22	0.24	0	0.46	0.8867	0.2084	0.8216	1.9329	0	52	64	116	48409	47844	42915	43744	0	182912	0.28	0.25	0.23	0.24	0	0.47	0.8623	0.3296	0.7536	1.8988	0	554495	585730	375826	401190	17120	1934361	0.27	0.29	0.22	0.23	0	0.44	0.9	0.165	0.8577	1.9555	0	3	3	6	74	105	122	149	450	0.16	0.23	0.27	0.33	0	0.6	0.8766	0.2723	0.7689	1.9458	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4919	6328	1741	3142	4835	6707	4682	3043	4048	4866	3100	5816	3806	2029	2773	3941	3738	4855	4241	3533	7930	2195	4466	3742	7480	3677	2075	3388	2015	4962	3796	3486	2800	2001	4221	4113	3646	4231	3019	4941	5339	2337	5729	4144	4279	2742	3511	5144	3002	2972	1639	2392	2020	4142	3899	4716	1041	2698	2595	1416	4304	1538	3613	1563
GCF_011077185.1	NC_048907	NC_048907.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 15; BPBGC_Ojam_1.0; whole genome shotgun sequence.	4036513	4048519	3373001	3374873	290740	15123646	0.27	0.27	0.22	0.22	0.02	0.45	0.9516	0.0018	0.9982	1.9833	239	232	471	2863124	3179995	2358665	2595236	104010	11101030	0.25	0.27	0.23	0.25	0	0.48	0.9199	0.1122	0.8961	1.9683	17537	171	174	345	168017	135319	163204	172715	10	639265	0.27	0.22	0.25	0.27	0.51	0.8616	0.32	0.7443	1.9347	0	1832544	2106552	1467110	1636832	96610	7139648	0.24	0.3	0.22	0.24	0	0.46	0.8865	0.2135	0.8177	1.9357	0	62	52	114	48693	48434	40602	42788	0	180517	0.27	0.24	0.23	0.26	0	0.49	0.8604	0.2797	0.7802	1.93	0	249574	260520	197588	207242	530	915454	0.26	0.29	0.22	0.24	0	0.45	0.8941	0.1864	0.8435	1.9533	51859	3	2	5	74	85	91	112	362	0.2	0.23	0.25	0.31	0	0.56	0.8878	0.1924	0.8295	1.9714	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4530	5952	1592	2742	4527	6700	4255	2650	3493	4054	2726	5473	3223	1909	2507	3467	3193	4376	3469	2891	7406	2036	3868	3418	7142	3355	1805	2999	1744	4194	3439	3012	2491	1782	3653	3673	3175	3843	2472	4632	5015	2236	5111	3941	3662	2306	3349	4413	2372	2582	1427	2461	1682	3557	3586	4113	858	2641	2371	1184	3598	1181	2866	1487
GCF_011077185.1	NC_048908	NC_048908.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 16; BPBGC_Ojam_1.0; whole genome shotgun sequence.	62054	61191	66752	68138	116150	374285	0.17	0.16	0.18	0.18	0.31	0.36	0.9326	0.0173	0.9829	1.748	40	24	64	39834	41298	46293	46807	30240	204472	0.2	0.22	0.27	0.29	0.01	0.56	0.8967	0.1658	0.8557	1.9506	0	20	15	35	9424	7344	13278	14033	0	44079	0.26	0.18	0.25	0.31	0.56	0.8492	0.4228	0.6824	1.902	0	22095	25182	23919	23420	30230	124846	0.22	0.27	0.25	0.25	0.01	0.51	0.8734	0.2621	0.7848	1.9357	0	1	1	2	243	218	219	243	0	923	0.26	0.23	0.24	0.27	0	0.51	0.8935	0.1758	0.8499	1.9815	0	942	858	812	681	0	3293	0.27	0.3	0.23	0.21	0	0.44	0.8807	0.2168	0.8202	1.9679	0	18	8	26	353	447	515	618	1933	0.18	0.23	0.27	0.32	0	0.59	0.8773	0.246	0.7944	1.9551	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	202	300	30	139	273	513	338	66	353	394	83	228	255	259	194	189	203	296	191	114	505	131	274	114	383	403	35	156	38	392	206	140	124	41	241	216	183	430	84	495	408	251	231	367	314	79	472	348	90	64	193	379	38	299	363	314	34	313	310	122	147	18	147	129
GCF_011077185.1	NC_048909	NC_048909.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 17; BPBGC_Ojam_1.0; whole genome shotgun sequence.	2960667	2996795	2756733	2779773	268750	11762718	0.25	0.25	0.23	0.24	0.02	0.47	0.9483	0.0102	0.9898	1.9859	202	155	357	2172998	2420410	2009094	2192186	40360	8835048	0.24	0.26	0.24	0.26	0	0.5	0.9202	0.1132	0.8953	1.9763	1144	145	111	256	125236	100895	123689	129432	0	479252	0.26	0.21	0.25	0.27	0.52	0.8616	0.3207	0.7444	1.9375	0	1410469	1629691	1284352	1416760	10150	5751422	0.24	0.29	0.22	0.25	0	0.47	0.8903	0.2029	0.8253	1.9513	0	52	39	91	27971	27550	26087	26651	0	108259	0.25	0.25	0.24	0.27	0	0.51	0.8568	0.3381	0.7498	1.9007	0	172962	175623	148540	154915	1300	653340	0.24	0.27	0.24	0.25	0	0.48	0.8935	0.2033	0.8275	1.9569	0	2	0	2	32	36	33	45	146	0.21	0.25	0.22	0.31	0	0.53	0.8205	0.2405	0.7926	1.9822	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3341	4521	1091	2081	3533	4706	3259	1824	2692	2993	1981	3998	2473	1520	1885	2611	2471	3382	2621	2004	5540	1718	3020	2663	5456	2619	1269	2166	1198	3479	2504	2389	1851	1179	2891	2733	2421	2921	1905	3253	3576	1458	3619	2989	2704	1664	2656	3333	1855	1956	1053	1634	1125	3037	2775	3308	613	1831	1705	939	2842	747	2197	1132
GCF_011077185.1	NC_048910	NC_048910.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 18; BPBGC_Ojam_1.0; whole genome shotgun sequence.	3228772	3252475	2829838	2852990	419590	12583665	0.26	0.26	0.22	0.23	0.03	0.45	0.9486	0.0077	0.9923	1.9776	197	175	372	2271045	2495923	1981044	2149915	310090	9208017	0.24	0.26	0.24	0.25	0.01	0.49	0.9194	0.11	0.8981	1.9663	21863	135	125	260	127839	102813	130550	136190	0	497392	0.26	0.21	0.25	0.27	0.52	0.8609	0.3247	0.7399	1.9329	0	1331537	1531240	1135535	1258266	180120	5436698	0.24	0.29	0.23	0.25	0	0.48	0.8853	0.2159	0.8163	1.9366	0	49	41	90	31085	30431	28102	28544	0	118162	0.26	0.24	0.25	0.25	0	0.51	0.8585	0.32	0.763	1.9057	0	209565	216826	189749	197806	7110	821056	0.25	0.27	0.22	0.25	0	0.47	0.9001	0.1621	0.8611	1.9612	0	10	2	12	167	198	222	284	871	0.19	0.23	0.25	0.33	0	0.58	0.8847	0.2471	0.7865	1.9578	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3400	4786	1125	1930	3535	5150	3401	1850	2846	3321	1849	3950	2560	1561	1714	2662	2364	3600	2830	2149	5890	1471	3174	2428	5318	2680	1296	2231	1237	3378	2648	2263	2004	1252	2873	2985	2578	3275	1989	3723	3938	1837	3783	3299	3090	1556	2758	3396	1755	1974	1155	1896	1156	2875	2989	3285	636	2185	1960	1008	2807	846	2200	1230
GCF_011077185.1	NC_048911	NC_048911.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 19; BPBGC_Ojam_1.0; whole genome shotgun sequence.	3064897	3041877	2706232	2682999	155980	11651985	0.26	0.26	0.23	0.23	0.01	0.46	0.9494	0.0081	0.992	1.9896	200	193	393	2413252	2708165	2117808	2326818	59330	9625373	0.24	0.26	0.24	0.26	0	0.5	0.919	0.1174	0.8913	1.9677	42586	149	133	282	125847	102625	125224	130928	10	484634	0.27	0.22	0.25	0.27	0.51	0.8629	0.3136	0.7474	1.9382	0	1651502	1911000	1392904	1552478	51910	6559794	0.24	0.29	0.22	0.24	0	0.46	0.8884	0.2064	0.8227	1.9397	0	42	45	87	28071	28174	25219	26738	0	108202	0.25	0.24	0.24	0.27	0	0.5	0.8634	0.2952	0.7719	1.9294	0	195102	210279	169454	182777	330	757942	0.25	0.29	0.21	0.24	0	0.46	0.8948	0.2105	0.8238	1.956	0	2	1	3	41	54	60	71	226	0.18	0.24	0.27	0.31	0	0.58	0.8805	0.2227	0.8068	1.9673	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3373	4473	1206	2024	3373	4821	3126	1852	2781	3127	1966	3831	2515	1609	1921	2626	2250	3443	2709	2193	5720	1505	3065	2462	5087	2598	1321	2194	1282	3270	2561	2271	1924	1331	2950	2796	2495	2885	1863	3589	3817	1800	3609	2944	3013	1715	2466	3357	1961	1986	1088	1940	1192	2694	2853	3182	699	1855	1880	992	2769	934	2345	1126
GCF_011077185.1	NC_048912	NC_048912.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 20; BPBGC_Ojam_1.0; whole genome shotgun sequence.	4285643	4264756	3622513	3606631	128440	15907983	0.27	0.27	0.23	0.23	0.01	0.45	0.9487	0.0046	0.9954	1.9904	248	219	467	2577374	2822266	2210472	2406757	50110	10066979	0.24	0.26	0.24	0.26	0	0.5	0.9176	0.111	0.897	1.9666	27287	169	150	319	138230	110271	139872	143096	0	531469	0.27	0.21	0.25	0.27	0.52	0.8602	0.3225	0.7426	1.9329	0	1483297	1676686	1229357	1358627	28220	5776187	0.24	0.28	0.23	0.25	0	0.48	0.8872	0.205	0.8246	1.9431	0	62	58	120	49695	49040	44303	46005	0	189043	0.27	0.25	0.23	0.25	0	0.48	0.8613	0.3089	0.7609	1.905	0	350832	373353	274200	293428	1110	1292923	0.26	0.29	0.22	0.24	0	0.46	0.8978	0.1819	0.8454	1.9588	0	2	2	4	42	70	83	93	288	0.15	0.24	0.29	0.32	0	0.61	0.8754	0.3121	0.747	1.9406	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3670	4857	1273	2162	3733	5125	3460	1975	3141	3416	2144	4102	2838	1677	2100	2982	2495	3795	2901	2275	5992	1579	3386	2616	5557	2886	1507	2297	1330	3711	2789	2378	2090	1487	3381	3165	2823	3604	2085	4001	4172	1798	3984	3464	3288	1764	2918	3762	1985	2166	1299	1978	1270	3151	3272	3714	635	2108	2062	1007	3114	909	2451	1184
GCF_011077185.1	NC_048913	NC_048913.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 21; BPBGC_Ojam_1.0; whole genome shotgun sequence.	2166623	2154962	1979055	1972207	157160	8430007	0.26	0.26	0.23	0.23	0.02	0.47	0.9512	0.0044	0.9956	1.9879	161	138	299	1621717	1805582	1462577	1609426	39080	6538382	0.24	0.26	0.24	0.25	0.01	0.49	0.9212	0.1101	0.8977	1.9706	25003	127	105	232	103134	85568	109744	113532	0	411978	0.26	0.21	0.26	0.28	0.53	0.8611	0.3087	0.7519	1.9354	0	967708	1116951	856286	953911	30800	3925656	0.23	0.28	0.23	0.25	0	0.48	0.8854	0.2293	0.8073	1.9372	0	25	30	55	27364	28435	24357	26070	0	106226	0.26	0.25	0.24	0.25	0	0.49	0.8754	0.3214	0.7562	1.9184	0	125049	127615	103720	106768	350	463502	0.26	0.28	0.22	0.23	0	0.45	0.9033	0.1624	0.8605	1.971	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2851	3720	935	1732	3031	4152	2845	1438	2402	2779	1457	3004	2086	1465	1606	2151	1990	3006	2275	1712	4912	1307	2650	2003	4332	2282	1078	1887	1040	2744	2173	1858	1655	995	2370	2277	2160	2659	1599	3267	3249	1512	2778	2691	2734	1289	2278	2740	1549	1589	1020	1816	881	2492	2428	2849	522	1786	1735	955	2238	652	1852	1040
GCF_011077185.1	NC_048914	NC_048914.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 22; BPBGC_Ojam_1.0; whole genome shotgun sequence.	1322792	1338373	1198781	1209574	427570	5497090	0.24	0.24	0.22	0.22	0.08	0.44	0.9515	0.0103	0.9897	1.9505	106	83	189	860572	945855	798829	865613	206130	3676999	0.22	0.24	0.25	0.27	0.02	0.52	0.9152	0.1161	0.8928	1.9477	9734	77	59	136	53184	43346	62472	63493	0	222495	0.25	0.21	0.27	0.28	0.55	0.8578	0.3188	0.745	1.9288	0	485379	555297	444880	491394	193170	2170120	0.21	0.26	0.25	0.28	0	0.53	0.8765	0.2514	0.7913	1.9208	0	28	19	47	11291	11264	10500	11481	0	44536	0.26	0.25	0.23	0.27	0	0.5	0.8661	0.3701	0.7219	1.8874	0	146239	155649	124335	132051	1020	559294	0.25	0.28	0.23	0.24	0.01	0.46	0.9021	0.1615	0.8626	1.9612	0	0	1	1	10	17	21	23	71	0.14	0.24	0.3	0.32	0	0.62	0.887	0.3047	0.7506	1.9387	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1335	1949	402	715	1548	2415	1493	703	1425	1517	666	1473	1005	863	752	1268	912	1672	1234	816	2732	735	1487	1048	2265	1367	485	821	463	1509	1213	857	938	419	1189	1417	1199	1822	928	1968	1850	1038	1291	1669	1523	659	1445	1401	730	830	669	1047	345	1334	1398	1564	207	1082	1118	522	1043	302	989	626
GCF_011077185.1	NC_048915	NC_048915.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 23; BPBGC_Ojam_1.0; whole genome shotgun sequence.	1658776	1680305	1723535	1738529	295990	7097135	0.23	0.24	0.24	0.24	0.04	0.49	0.9502	0.0108	0.9893	1.9752	153	130	283	1025044	1137455	1080735	1173733	173620	4590587	0.22	0.24	0.25	0.27	0.02	0.53	0.9133	0.1189	0.8904	1.9491	12375	117	94	211	82144	64093	94868	97643	0	338748	0.25	0.19	0.27	0.29	0.56	0.8573	0.3417	0.7305	1.919	0	550563	646183	558970	621379	58170	2435265	0.21	0.26	0.25	0.27	0	0.53	0.8778	0.242	0.7978	1.9256	0	32	30	62	16886	17925	15440	16793	0	67044	0.23	0.24	0.26	0.27	0	0.53	0.8537	0.3484	0.7519	1.8948	0	90070	91563	87188	89525	10420	368766	0.25	0.26	0.24	0.25	0.01	0.48	0.901	0.1648	0.8567	1.9624	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2100	3238	623	1174	2447	3843	2285	990	2254	2267	1001	2361	1663	1366	1177	1686	1434	2475	1889	1122	3903	1099	2191	1514	3822	2096	710	1248	640	2263	1827	1206	1368	697	1777	2193	1777	2812	1277	2944	2854	1529	2233	2779	2161	927	2293	2135	1096	1130	1000	1658	581	1926	2154	2388	365	1719	1854	682	1620	384	1332	780
GCF_011077185.1	NC_048916	NC_048916.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 24; BPBGC_Ojam_1.0; whole genome shotgun sequence.	1908827	1928258	1874696	1893013	70730	7675524	0.25	0.25	0.24	0.25	0.01	0.49	0.9505	0.0099	0.9901	1.9947	144	119	263	1332295	1481019	1326918	1437173	34270	5611675	0.23	0.25	0.25	0.26	0	0.51	0.918	0.1082	0.8994	1.9741	14057	97	77	174	74943	61577	87890	85962	0	310372	0.25	0.2	0.27	0.28	0.55	0.8616	0.3142	0.748	1.9374	1	674710	777949	662818	724643	27190	2867310	0.22	0.27	0.24	0.26	0	0.51	0.8816	0.237	0.802	1.937	0	44	40	84	31657	31039	29932	30891	0	123519	0.25	0.24	0.24	0.26	0	0.51	0.8563	0.3039	0.7675	1.9267	0	169661	179252	155665	163655	720	668953	0.25	0.28	0.23	0.24	0	0.47	0.8972	0.1673	0.8557	1.966	0	1	0	1	11	17	18	26	72	0.15	0.24	0.25	0.36	0	0.61	0.8987	0.3961	0.6697	1.9364	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2049	2447	589	1376	2391	2939	2215	857	2108	2244	884	2019	1805	1275	1174	1549	1614	2201	1636	1039	3645	954	2075	1277	3417	2014	778	1195	581	2060	1541	1279	1223	589	1924	1762	1697	2384	1161	2538	2673	1257	1813	2177	2106	885	1945	2000	1125	1159	829	1335	528	2079	1956	2502	335	1393	1356	699	1655	375	1472	772
GCF_011077185.1	NC_048917	NC_048917.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 25; BPBGC_Ojam_1.0; whole genome shotgun sequence.	482988	479882	622980	616416	537300	2739566	0.18	0.18	0.23	0.23	0.2	0.45	0.9445	0.0085	0.9915	1.8518	86	107	193	318061	351839	440027	462692	212690	1785309	0.19	0.2	0.29	0.29	0.03	0.58	0.9004	0.1187	0.8916	1.8986	10860	69	85	154	47978	38454	63592	62966	10	213000	0.23	0.19	0.29	0.3	0.58	0.8572	0.332	0.7363	1.9198	0	153694	187148	199182	217912	147290	905226	0.18	0.23	0.28	0.3	0.01	0.58	0.8656	0.2893	0.7649	1.898	0	12	10	22	6128	5857	6784	6959	0	25728	0.23	0.22	0.28	0.28	0	0.56	0.8664	0.3161	0.7605	1.9099	0	11070	12409	13825	13611	1000	51915	0.22	0.27	0.24	0.25	0.02	0.48	0.8812	0.2508	0.795	1.9207	0	1	0	1	13	16	19	26	74	0.18	0.22	0.26	0.35	0	0.61	0.887	0.259	0.7716	1.9523	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1224	1871	322	663	1516	2386	1459	503	1463	1365	479	1180	913	977	639	1083	938	1565	1070	573	2491	755	1403	839	2488	1379	411	615	325	1500	1087	766	883	280	1022	1335	1240	1994	830	2009	1984	1162	1011	1876	1552	581	1628	1128	704	736	728	1188	268	1429	1274	1645	125	1301	1277	496	1034	193	791	708
GCF_011077185.1	NC_048918	NC_048918.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 26; BPBGC_Ojam_1.0; whole genome shotgun sequence.	1568664	1569276	1694930	1687080	207850	6727800	0.23	0.23	0.25	0.25	0.03	0.5	0.9479	0.0025	0.9975	1.9811	157	164	321	1131176	1247815	1211942	1293252	35220	4919405	0.22	0.24	0.26	0.27	0.01	0.53	0.9159	0.1136	0.895	1.9691	21861	108	125	233	90063	73419	104872	104948	0	373302	0.25	0.2	0.27	0.28	0.55	0.8613	0.3253	0.7418	1.9315	0	604153	697747	636165	687187	6930	2632182	0.21	0.26	0.26	0.27	0	0.53	0.8807	0.2358	0.8027	1.9363	0	43	32	75	26014	26240	24312	26116	0	102682	0.24	0.24	0.25	0.27	0	0.52	0.857	0.3028	0.7643	1.9107	0	106565	112956	98399	102579	5810	426309	0.23	0.26	0.24	0.26	0.01	0.5	0.8924	0.1998	0.8299	1.9424	0	0	1	1	14	14	20	24	72	0.19	0.19	0.28	0.33	0	0.61	0.9044	0.0909	0.9167	1.9604	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2660	3509	696	1452	2645	3975	2602	1057	2501	2546	993	2342	1867	1559	1399	2131	1677	2882	2251	1293	4664	1082	2559	1508	4049	2405	803	1470	638	2427	2232	1303	1605	682	2136	2307	2018	2924	1527	3122	3110	1515	2190	2572	2560	1009	2347	2296	1267	1291	1119	1564	657	2244	2355	2756	402	1822	1759	727	1750	464	1649	886
GCF_011077185.1	NC_048919	NC_048919.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 27; BPBGC_Ojam_1.0; whole genome shotgun sequence.	1286801	1300915	1321807	1327722	677570	5914815	0.22	0.22	0.22	0.22	0.11	0.45	0.9506	0.0077	0.9923	1.9262	142	136	278	962463	1063990	994647	1067636	87030	4175766	0.22	0.24	0.26	0.28	0.01	0.54	0.9123	0.1221	0.888	1.9565	27201	114	101	215	79917	63482	94655	95789	0	333843	0.25	0.19	0.27	0.29	0.56	0.8584	0.335	0.7352	1.9227	0	649062	740478	643781	700769	75790	2809880	0.2	0.25	0.26	0.28	0	0.54	0.8748	0.2399	0.7987	1.9246	0	18	22	40	11992	12568	11561	12121	0	48242	0.25	0.24	0.25	0.26	0	0.52	0.8696	0.3043	0.7626	1.911	0	56705	60296	52734	53780	10	223525	0.23	0.26	0.25	0.26	0	0.5	0.8979	0.189	0.8394	1.9592	0	4	4	8	115	136	149	190	590	0.19	0.23	0.25	0.32	0	0.58	0.8799	0.1975	0.8249	1.9714	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2077	2936	576	1146	2322	3818	2214	984	2268	2086	977	2296	1461	1366	1075	1895	1414	2450	1969	1114	4014	1120	2289	1393	3530	2077	654	1170	622	2311	1966	1255	1500	563	1721	2325	1782	2793	1547	3025	2990	1562	1960	2623	2169	919	2207	1970	1040	1143	989	1609	509	1766	2160	2196	315	1674	1679	756	1662	393	1357	946
GCF_011077185.1	NC_048920	NC_048920.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 28; BPBGC_Ojam_1.0; whole genome shotgun sequence.	1240234	1236411	1318953	1308943	631059	5735600	0.22	0.22	0.23	0.23	0.11	0.46	0.951	0.0054	0.9947	1.929	136	132	268	888046	993609	944930	1019624	62889	3909098	0.22	0.24	0.26	0.28	0.01	0.54	0.9144	0.1185	0.8905	1.9598	2633	114	114	228	91974	73053	104672	108077	2	377778	0.25	0.2	0.26	0.28	0.55	0.8593	0.3329	0.7375	1.9269	0	528753	624815	540893	596903	40027	2331391	0.21	0.26	0.25	0.27	0	0.53	0.876	0.2446	0.7956	1.9223	0	13	13	26	8290	7756	8521	8575	0	33142	0.27	0.23	0.24	0.26	0	0.5	0.8631	0.3633	0.7418	1.8942	0	30838	29829	28173	28187	0	117027	0.25	0.27	0.23	0.24	0	0.47	0.8955	0.1867	0.8382	1.9634	0	2	2	4	56	68	76	92	292	0.19	0.23	0.26	0.31	0	0.58	0.8806	0.208	0.8185	1.9706	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2504	3302	760	1439	2718	4266	2557	1060	2473	2702	1178	2554	1844	1557	1359	1996	1623	2740	1973	1255	4604	1158	2414	1783	4068	2324	902	1421	744	2628	2106	1446	1543	726	2046	2420	2014	2843	1499	3233	3223	1675	2331	2793	2357	1059	2487	2468	1226	1423	1040	1778	639	2371	2344	2500	346	1826	1759	845	1887	473	1625	978
GCF_011077185.1	NC_048921	NC_048921.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 30; BPBGC_Ojam_1.0; whole genome shotgun sequence.	92164	92680	114768	118980	127690	546282	0.17	0.17	0.21	0.22	0.23	0.43	0.9438	0.0208	0.9795	1.8192	20	15	35	75241	85367	99647	102068	1360	363683	0.2	0.22	0.28	0.29	0.01	0.57	0.9081	0.121	0.8891	1.9619	266	19	12	31	12344	9649	16750	16683	0	55426	0.23	0.18	0.29	0.3	0.59	0.8555	0.331	0.738	1.9149	0	46040	56613	61447	63375	1060	228535	0.18	0.23	0.29	0.29	0	0.59	0.8646	0.305	0.7556	1.9171	0	2	1	3	746	792	755	727	0	3020	0.22	0.23	0.25	0.3	0	0.55	0.8764	0.2801	0.7726	1.9405	0	1588	1662	1259	1472	200	6181	0.25	0.27	0.18	0.24	0.05	0.42	0.8906	0.2264	0.8163	1.8878	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	283	426	78	147	415	561	413	104	356	396	123	354	264	293	149	241	211	400	278	130	619	206	407	211	543	361	110	165	42	457	250	212	222	45	268	354	309	483	171	525	516	374	245	422	394	131	377	364	148	226	194	398	59	390	358	446	34	390	364	164	281	51	239	221
GCF_011077185.1	NC_048922	NC_048922.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 31; BPBGC_Ojam_1.0; whole genome shotgun sequence.	89337	92243	85801	85975	176680	530036	0.17	0.17	0.16	0.16	0.33	0.32	0.9393	0.017	0.9832	1.7229	8	12	20	49569	52050	48247	51174	30640	231680	0.23	0.24	0.23	0.24	0.06	0.47	0.91	0.1075	0.9011	1.8968	0	6	9	15	6698	6103	8684	9976	0	31461	0.23	0.2	0.26	0.31	0.57	0.8416	0.3587	0.7192	1.9054	0	25064	27462	22588	24082	25530	124726	0.22	0.26	0.24	0.26	0.02	0.5	0.8712	0.2675	0.7908	1.9043	0	1	3	4	1032	1083	963	978	0	4056	0.26	0.29	0.18	0.27	0	0.45	0.8088	0.5533	0.579	1.6293	0	6432	6153	5980	6321	5000	29886	0.26	0.23	0.21	0.25	0.04	0.46	0.891	0.207	0.8407	1.9255	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	324	274	72	137	288	244	272	64	179	419	65	84	127	189	106	113	171	273	121	93	403	93	194	67	490	200	45	179	44	237	141	80	123	62	195	147	157	269	62	290	250	73	85	259	201	62	336	122	193	62	71	141	33	141	270	348	46	175	137	47	91	27	170	36
GCF_011077185.1	NC_048923	NC_048923.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 32; BPBGC_Ojam_1.0; whole genome shotgun sequence.	8138	8347	15214	15529	3310	50538	0.16	0.17	0.3	0.31	0.07	0.61	0.9079	0.0229	0.9773	1.8978	3	1	4	5937	6049	11784	11319	2310	37399	0.16	0.17	0.32	0.3	0.04	0.62	0.8986	0.0701	0.9334	1.9021	0	1	1	2	1384	990	2320	2005	0	6699	0.22	0.18	0.3	0.3	0.6	0.8688	0.3379	0.7283	1.9247	0	1276	1550	2293	2157	10	7286	0.15	0.21	0.33	0.3	0	0.63	0.8642	0.2369	0.8034	1.9177	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	38	87	1	9	11	114	10	9	44	17	5	16	5	44	8	78	8	71	53	15	124	4	60	18	156	43	3	12	6	9	107	14	50	1	8	85	46	98	35	128	86	30	19	83	33	8	38	11	2	8	42	47	1	14	29	13	0	30	62	3	7	0	8	7
GCF_011077185.1	NC_048924	NC_048924.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 33; BPBGC_Ojam_1.0; whole genome shotgun sequence.	408709	397669	495874	495069	448470	2245791	0.18	0.18	0.22	0.22	0.2	0.44	0.9456	0.0145	0.9857	1.8517	76	50	126	265871	294964	347756	367661	108810	1385062	0.2	0.21	0.27	0.28	0.02	0.56	0.91	0.11	0.8988	1.932	1344	64	39	103	38879	30946	53030	52751	20	175626	0.23	0.18	0.29	0.3	0.59	0.856	0.3327	0.7345	1.9214	0	131388	156361	166605	180014	101350	735718	0.18	0.23	0.29	0.31	0.01	0.59	0.8627	0.2809	0.7709	1.8992	0	6	10	16	7073	7030	6927	7134	0	28164	0.24	0.23	0.25	0.28	0	0.53	0.8785	0.2982	0.7774	1.9205	0	11885	12442	16045	16408	1010	57790	0.22	0.26	0.24	0.27	0.01	0.51	0.8835	0.2304	0.8092	1.9529	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1054	1441	241	562	1315	1990	1374	388	1161	1182	392	924	685	746	533	1012	665	1320	911	493	2222	661	1142	606	1978	1234	312	483	270	1272	989	566	815	213	805	1187	993	1739	711	1949	1683	939	773	1605	1158	369	1316	933	500	533	608	1023	162	1031	1059	1178	95	1120	1060	411	785	124	647	586
GCF_011077185.1	NC_048925	NC_048925.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome W; BPBGC_Ojam_1.0; whole genome shotgun sequence.	191658	197131	140584	142123	143480	814976	0.24	0.24	0.17	0.17	0.18	0.35	0.9395	0.0195	0.9807	1.8631	9	5	14	126980	137711	86342	91174	17750	459957	0.28	0.3	0.2	0.21	0.02	0.4	0.9288	0.089	0.9161	1.9581	0	5	3	8	5365	4147	3332	3767	0	16611	0.33	0.26	0.19	0.22	0.41	0.861	0.3349	0.7341	1.9239	0	78247	87639	51835	54965	16520	289206	0.29	0.35	0.16	0.18	0.01	0.35	0.8895	0.2031	0.8238	1.901	0	3	2	5	880	1097	571	735	0	3283	0.34	0.25	0.19	0.22	0	0.41	0.7842	0.6642	0.5454	1.6991	0	13351	13746	9285	10752	100	47234	0.29	0.29	0.19	0.23	0	0.42	0.8948	0.204	0.8288	1.9533	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	154	147	92	100	106	118	99	115	72	95	121	152	94	24	89	135	90	104	72	93	135	38	76	121	148	57	68	94	76	90	72	117	47	107	128	65	67	48	61	59	99	25	263	61	66	83	53	166	87	78	25	23	111	72	90	89	32	32	25	30	103	58	65	25
GCF_011077185.1	NC_048926	NC_048926.1	Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome Z; BPBGC_Ojam_1.0; whole genome shotgun sequence.	22884707	22882965	15094653	15076151	6715581	82654057	0.28	0.28	0.18	0.18	0.08	0.37	0.9481	0.0007	0.9993	1.9217	508	518	1026	11410216	12406289	7495958	8142552	877660	40332675	0.28	0.3	0.2	0.21	0.01	0.41	0.9233	0.1003	0.9064	1.9558	128105	329	359	688	381641	312633	291481	318538	0	1304293	0.3	0.24	0.22	0.24	0.46	0.8649	0.3076	0.7516	1.9408	0	7849796	8726923	5085779	5578249	461640	27702387	0.28	0.33	0.18	0.2	0	0.39	0.896	0.1698	0.8511	1.9302	0	175	147	322	101739	101990	71858	75251	0	350838	0.3	0.27	0.21	0.23	0	0.43	0.848	0.4169	0.7055	1.8396	0	1086509	1092591	705171	707692	206580	3798543	0.29	0.3	0.2	0.2	0.01	0.4	0.9002	0.1518	0.8706	1.9362	0	1	3	4	58	76	77	99	310	0.19	0.24	0.25	0.32	0	0.57	0.8888	0.2623	0.7755	1.9674	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10892	12532	4244	6817	8641	10691	7839	7480	6136	7967	7764	13021	7976	2571	6474	7515	7163	8548	7398	7850	12809	4179	6688	8425	12768	5640	4374	7701	5116	8687	6566	7219	4759	5480	9354	6598	5984	5136	5455	6790	8249	2467	13696	5828	6708	5938	4860	10430	6192	6337	2021	2731	4970	6633	6356	7969	2560	2823	2789	1927	8887	3631	6939	2255