GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000182965.3	NC_032089	NC_032089.1	Candida albicans SC5314 chromosome 1; complete sequence.	1061398	1064840	530171	530690	921	3188020	0.33	0.33	0.17	0.17	0.33	0.6157	0.0021	0.9979	1.9177	669	707	1376	696753	601143	329291	367642	38	1994867	0.35	0.3	0.17	0.19	0.35	0.8899	0.2097	0.818	1.9156	14	642	684	1326	687249	591318	324956	362728	38	1966289	0.35	0.3	0.17	0.19	0.35	0.8861	0.2308	0.8059	1.9102	14	6288	6608	2650	2844	18390	0.33	0.38	0.15	0.15	0.29	0.8406	0.3026	0.7558	1.8354	15	7	22	646	765	305	362	2078	0.31	0.37	0.15	0.17	0.32	0.8521	0.2929	0.7626	1.862	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10	13	23	332	446	403	551	1732	0.19	0.25	0.24	0.32	0.56	0.8458	0.3885	0.7008	1.9346	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11519	13289	6408	16507	10437	8165	14295	25917	5925	6517	31685	32804	17811	2575	11756	12369	13225	6687	9344	19770	2935	15756	1795	29415	4929	7446	3897	22306	16800	9523	8435	6857	5192	11694	12821	8376	3470	2837	6516	6335	3309	592	35324	2878	1474	17117	4624	14446	5783	10556	4447	1432	25269	8572	2224	15544	635	822	1998	3986	24270	1262	1051	3366
GCF_000182965.3	NC_032090	NC_032090.1	Candida albicans SC5314 chromosome 2; complete sequence.	743403	739961	373023	373169	2131	2231687	0.33	0.33	0.17	0.17	0.33	0.6118	0.0025	0.9975	1.9192	537	486	1023	502860	429384	237091	266397	0	1435732	0.35	0.3	0.17	0.19	0.35	0.8909	0.2076	0.8197	1.9162	0	515	465	980	497524	423798	234571	263697	0	1419590	0.35	0.3	0.16	0.19	0.35	0.8888	0.2243	0.81	1.9115	0	3395	3695	1408	1413	9911	0.34	0.38	0.15	0.14	0.29	0.834	0.3407	0.7294	1.8282	9	6	15	639	689	302	313	1943	0.35	0.36	0.15	0.15	0.29	0.8459	0.2359	0.8	1.8434	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13	11	24	380	472	413	527	1792	0.21	0.26	0.23	0.3	0.53	0.8559	0.3468	0.7169	1.9628	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8447	9390	4818	12000	7904	6348	9763	18767	4036	4625	22821	24141	12703	2006	8425	8631	9146	5010	6476	14223	2191	11105	1340	21267	3848	5314	3078	16040	11943	6991	6096	5075	3635	8796	9304	6229	2525	2164	4577	4490	2514	441	25529	2027	1004	12154	3530	10060	4192	7524	3368	1158	18103	6205	1616	11271	455	574	1573	2720	17588	770	546	2542
GCF_000182965.3	NC_032091	NC_032091.1	Candida albicans SC5314 chromosome 3; complete sequence.	599327	597389	301677	299569	1001	1798963	0.33	0.33	0.17	0.17	0.33	0.6107	0.0051	0.9949	1.9191	388	370	758	394392	341707	187722	209589	46	1133456	0.34	0.3	0.17	0.19	0.36	0.8898	0.206	0.8213	1.9189	139	378	352	730	390328	337221	185642	207414	46	1120651	0.35	0.3	0.17	0.19	0.35	0.8866	0.2317	0.806	1.9097	139	3133	3530	1399	1399	9461	0.32	0.4	0.14	0.14	0.28	0.8391	0.3276	0.7327	1.7908	3	1	4	211	206	115	109	641	0.37	0.3	0.18	0.15	0.33	0.8476	0.3011	0.7698	1.8696	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6	15	21	325	408	357	440	1530	0.21	0.26	0.23	0.29	0.52	0.8585	0.269	0.7743	1.969	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6832	7282	3614	9780	5946	4765	7732	15026	3247	3831	18024	18574	10145	1666	6713	6834	7212	3862	5219	11215	1699	8834	1130	16760	2899	4394	2390	12470	9882	5313	4922	3979	2914	6808	7160	4733	2000	1738	3586	3770	1914	350	19876	1690	830	9656	2924	7726	3405	5819	2686	933	14682	4605	1232	8688	343	592	1180	2321	14008	637	408	2050
GCF_000182965.3	NC_032092	NC_032092.1	Candida albicans SC5314 chromosome 4; complete sequence.	535630	531806	266941	268038	671	1603086	0.33	0.33	0.17	0.17	0.33	0.6115	0.0056	0.9944	1.9186	322	358	680	356560	305256	167585	187132	79	1016612	0.35	0.3	0.17	0.19	0.35	0.8902	0.2169	0.8128	1.9157	169	313	336	649	353414	301938	166053	185317	79	1006801	0.35	0.3	0.16	0.19	0.35	0.8886	0.2326	0.8043	1.9101	29	1563	1780	700	739	4782	0.32	0.37	0.15	0.15	0.31	0.8509	0.2947	0.76	1.8585	1	11	12	364	395	162	206	1127	0.33	0.35	0.14	0.18	0.33	0.8449	0.2228	0.8163	1.885	13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	9	17	255	351	285	353	1244	0.21	0.29	0.23	0.28	0.51	0.8703	0.3211	0.7296	1.9723	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5919	6673	3253	8806	5448	4623	7274	13418	2942	3289	16414	17556	9009	1377	6051	6083	6645	3347	4612	10020	1433	7544	947	15635	2633	3939	1990	11208	8753	4818	4260	3548	2650	6173	6541	4285	1838	1467	3221	3280	1732	294	18216	1399	675	8793	2464	6768	3074	5298	2304	782	13027	4415	1022	7871	242	392	1025	1930	12479	465	219	1735
GCF_000182965.3	NC_032093	NC_032093.1	Candida albicans SC5314 chromosome 5; complete sequence.	394747	399152	199605	196727	381	1190612	0.33	0.34	0.17	0.17	0.33	0.6144	0.0128	0.9873	1.9178	236	276	512	252044	214958	117210	131339	0	715551	0.35	0.3	0.17	0.19	0.35	0.8909	0.2168	0.8123	1.9155	182	227	272	499	250177	213091	116342	130396	0	710006	0.35	0.3	0.16	0.19	0.35	0.8891	0.2254	0.8064	1.911	182	1200	1197	466	477	3340	0.35	0.36	0.15	0.14	0.29	0.8371	0.319	0.7368	1.8371	3	2	5	147	159	74	97	477	0.31	0.33	0.16	0.2	0.37	0.8727	0.2479	0.7915	1.9201	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	1	6	78	119	110	136	443	0.18	0.27	0.25	0.3	0.56	0.8571	0.3128	0.7479	1.951	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4399	4613	2295	5979	3565	3067	4707	9406	2011	2365	11908	11911	6412	1033	4324	4560	4577	2517	3357	7107	1009	5433	654	10820	1783	2687	1468	7951	6162	3484	3175	2332	1818	4524	4635	3028	1313	1062	2244	2300	1170	206	12934	1022	475	5880	1851	4842	2253	3811	1668	496	9363	2993	786	5662	218	301	737	1390	8737	372	211	1269
GCF_000182965.3	NC_032094	NC_032094.1	Candida albicans SC5314 chromosome 6; complete sequence.	343306	343129	173488	173035	135	1033093	0.33	0.33	0.17	0.17	0.34	0.6166	0.0016	0.9984	1.9204	215	216	431	229028	199540	110299	120476	0	659343	0.35	0.3	0.17	0.18	0.35	0.8872	0.2052	0.8221	1.9138	2	208	210	418	223938	194879	108029	118125	0	644971	0.35	0.3	0.17	0.18	0.35	0.8859	0.225	0.8105	1.9097	0	1600	1834	688	746	4868	0.33	0.38	0.15	0.14	0.29	0.841	0.3073	0.754	1.836	2	2	4	122	109	47	42	320	0.39	0.34	0.15	0.12	0.27	0.8251	0.4459	0.6849	1.7902	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	1	4	64	86	68	94	312	0.21	0.27	0.21	0.3	0.51	0.8938	0.3154	0.736	1.9651	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3795	3704	2077	6336	3296	2626	4665	8656	1743	2364	10470	10539	5979	971	3885	3946	4224	2367	3062	6436	931	5255	551	9658	1599	2891	1211	6841	5789	3152	2900	2266	1666	3903	4451	2583	1096	919	2008	2058	1039	163	11283	1009	391	5780	1640	4248	1876	3318	1362	538	8428	2795	637	5427	214	304	671	1294	7960	329	217	1147
GCF_000182965.3	NC_032095	NC_032095.1	Candida albicans SC5314 chromosome 7; complete sequence.	314590	316678	158530	159555	39	949392	0.33	0.33	0.17	0.17	0.34	0.6021	0.0065	0.9935	1.92	202	192	394	204070	176602	96468	107050	0	584190	0.35	0.3	0.17	0.18	0.35	0.8901	0.2066	0.8203	1.9139	0	199	188	387	201709	174097	95185	105714	0	576705	0.35	0.3	0.16	0.19	0.35	0.8884	0.2247	0.8104	1.9093	0	1225	1403	590	542	3760	0.33	0.38	0.16	0.13	0.29	0.8325	0.3505	0.7266	1.8286	3	0	3	110	132	57	54	353	0.31	0.37	0.16	0.15	0.32	0.8569	0.2713	0.7676	1.8791	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	18	22	19	26	85	0.22	0.26	0.22	0.31	0.53	0.8115	0.4554	0.6586	1.9359	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3469	3577	1853	4926	3057	2447	4029	7986	1661	1876	9336	9874	5211	799	3407	3437	3795	2000	2590	5830	831	4433	599	8855	1322	2409	1058	6483	5054	2723	2516	1998	1463	3573	3855	2471	1053	895	1757	1871	944	208	10265	823	414	4830	1499	3889	1717	2936	1286	440	7896	2459	648	4545	176	252	612	1232	7191	332	215	1029
GCF_000182965.3	NC_032096	NC_032096.1	Candida albicans SC5314 chromosome R; complete sequence.	759111	754406	385025	386364	1087	2285993	0.33	0.33	0.17	0.17	0.34	0.6116	0.0048	0.9952	1.9223	492	510	1002	489032	418493	235188	265433	0	1408146	0.34	0.3	0.17	0.19	0.36	0.8914	0.2218	0.8092	1.9196	194	469	478	947	483167	411914	231719	261168	0	1387968	0.35	0.3	0.16	0.19	0.35	0.8904	0.24	0.7989	1.9105	106	2536	2832	1061	1165	7594	0.32	0.39	0.14	0.15	0.29	0.8385	0.3303	0.7358	1.8254	8	10	18	1027	1236	579	661	3503	0.32	0.33	0.18	0.17	0.35	0.8613	0.2902	0.7674	1.8981	78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10	20	30	455	622	511	691	2279	0.2	0.27	0.22	0.31	0.53	0.8523	0.3634	0.7085	1.9544	3	1	4	1444	1439	1065	1478	5426	0.27	0.26	0.21	0.26	0	0.47	0.9098	0.139	0.8755	1.991	8580	9482	4453	11287	7660	6786	9475	18295	4183	4526	21339	23436	12375	1918	7980	8829	8864	5012	6553	13748	2122	10897	1400	20480	4006	5365	3025	16315	11655	6701	6161	4836	3691	8597	9222	6546	2618	2219	4631	4776	2504	491	24529	2122	944	11803	3543	9998	4227	6914	3225	1171	17138	5815	1599	10965	343	621	1506	2825	16805	634	357	2478