GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000235365.1	NC_016449	NC_016449.1	Eremothecium cymbalariae DBVPG#7215 chromosome 1; complete sequence.	332048	332724	223965	221508	0	1110245	0.3	0.3	0.2	0.2	0.4	0.9549	0.0065	0.9935	1.9717	253	285	538	246299	226829	150187	181268	0	804583	0.3	0.28	0.19	0.23	0.42	0.9106	0.219	0.812	1.9621	26	238	262	500	225039	207205	137863	166648	0	736755	0.3	0.28	0.19	0.23	0.42	0.9074	0.2401	0.8011	1.9543	0	1691	2171	1150	1396	6408	0.28	0.37	0.14	0.21	0.35	0.8599	0.4633	0.6508	1.8628	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	6	11	158	195	213	238	804	0.2	0.24	0.26	0.3	0.56	0.8745	0.3211	0.7349	1.953	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5336	8214	3130	4692	4227	6280	5176	7199	2861	2775	7714	9571	4221	2250	3647	4892	5728	3540	3827	6647	2543	5466	1572	9747	4483	2690	3331	7333	5208	2983	3635	3439	2379	4179	3936	4277	1923	1512	3347	2462	2490	849	8332	2562	1201	6193	2676	4139	2107	3748	2468	2126	6007	3533	2844	4016	211	1110	1472	2095	5460	322	309	924
GCF_000235365.1	NC_016450	NC_016450.1	Eremothecium cymbalariae DBVPG#7215 chromosome 2; complete sequence.	475943	479503	323598	322864	13	1601921	0.3	0.3	0.2	0.2	0.4	0.955	0.0049	0.9952	1.973	413	409	822	358021	330210	219113	265552	13	1172909	0.3	0.28	0.19	0.23	0.42	0.9107	0.2174	0.8129	1.9634	0	386	372	758	331164	304934	203669	246112	13	1085892	0.3	0.28	0.19	0.23	0.42	0.9072	0.2243	0.8089	1.9613	0	1673	2094	937	1348	6052	0.28	0.37	0.15	0.2	0.35	0.8637	0.3854	0.701	1.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13	11	24	362	444	446	539	1791	0.2	0.25	0.24	0.3	0.55	0.8696	0.307	0.7511	1.9584	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7899	12593	4534	6796	6350	9124	7429	10520	4281	4173	11533	13664	6341	3431	5411	7214	8615	5354	5682	9854	3757	7886	2343	14156	7201	3870	4752	10797	7819	4618	5287	4760	3357	6336	5685	6143	2694	2295	4785	3573	3470	1333	11746	3823	1876	9109	3849	6083	3202	5564	3800	3138	8878	5117	4265	5956	245	1648	2395	2809	8438	411	371	1503
GCF_000235365.1	NC_016451	NC_016451.1	Eremothecium cymbalariae DBVPG#7215 chromosome 3; complete sequence.	357818	359579	235065	241151	0	1193613	0.3	0.3	0.2	0.2	0.4	0.9543	0.0152	0.9849	1.9703	327	295	622	269935	248884	161862	195979	0	876660	0.3	0.28	0.19	0.23	0.42	0.91	0.2075	0.8207	1.962	0	302	263	565	250738	231280	150657	181858	0	814533	0.31	0.28	0.18	0.23	0.41	0.9068	0.2269	0.81	1.9551	0	927	1154	372	657	3110	0.3	0.38	0.12	0.19	0.32	0.8322	0.487	0.6276	1.8438	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	17	25	406	465	489	573	1933	0.21	0.24	0.25	0.3	0.55	0.8764	0.2412	0.7957	1.9703	34	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5900	8975	3386	5229	4894	6811	5747	8314	3036	2878	9006	10813	4577	2414	4036	5331	6453	3832	4275	7331	2873	6027	1706	10808	5021	2868	3563	8119	5954	3304	3974	3660	2487	4935	4458	4397	2100	1635	3472	2594	2386	839	9030	2614	1404	7047	2720	4640	2515	4156	2618	2387	7082	3870	3139	4536	186	1170	1776	2088	6363	341	309	1088
GCF_000235365.1	NC_016452	NC_016452.1	Eremothecium cymbalariae DBVPG#7215 chromosome 4; complete sequence.	457188	459657	312418	311709	0	1540972	0.3	0.3	0.2	0.2	0.41	0.9547	0.0038	0.9962	1.9738	387	405	792	353938	321397	215505	261268	0	1152108	0.3	0.27	0.19	0.24	0.43	0.9096	0.2212	0.8103	1.9638	0	350	369	719	323396	293606	196731	238385	0	1052118	0.3	0.28	0.19	0.23	0.42	0.9078	0.237	0.8016	1.9573	0	1881	2178	731	1554	6344	0.3	0.36	0.12	0.22	0.34	0.8474	0.4409	0.6718	1.8734	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13	12	25	351	457	467	572	1847	0.19	0.25	0.25	0.31	0.57	0.8663	0.3313	0.7359	1.9423	0	6	1	7	2866	2841	2140	2923	10770	0.26	0.27	0.2	0.26	0	0.47	0.9101	0.1804	0.8401	1.9878	7629	12163	4319	6518	6262	9140	7270	10238	4104	3779	11323	13955	6267	3321	5322	6916	8333	5214	5395	9427	3860	7379	2170	14193	6924	3654	4623	10345	7333	4380	5074	4794	3196	6027	5780	6015	2604	2101	4541	3513	3411	1155	11560	3597	1763	8603	3647	5942	2898	5329	3722	3151	8529	4910	3983	5820	276	1613	2325	2765	8054	432	378	1421
GCF_000235365.1	NC_016453	NC_016453.1	Eremothecium cymbalariae DBVPG#7215 chromosome 5; complete sequence.	417692	413395	276165	278599	0	1385851	0.3	0.3	0.2	0.2	0.4	0.9546	0.0096	0.9905	1.9711	353	326	679	321136	293084	194187	231759	0	1040166	0.3	0.28	0.19	0.23	0.42	0.9107	0.2082	0.8205	1.9629	0	310	295	605	274057	250459	167178	200209	0	891903	0.31	0.28	0.19	0.23	0.42	0.9095	0.2173	0.8154	1.9601	0	1202	1488	583	929	4202	0.29	0.36	0.15	0.21	0.35	0.8559	0.4304	0.6659	1.8786	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	9	17	240	314	309	384	1247	0.19	0.25	0.25	0.31	0.55	0.8712	0.2938	0.7639	1.9572	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6301	10042	3740	5791	5187	7586	6154	8818	3561	3295	9779	11607	4986	2723	4500	6116	7216	4357	4513	7701	3157	6373	1905	11982	5738	3216	3910	8963	6268	3607	4384	4013	2776	5094	4753	5180	2129	1809	4024	2903	2817	1050	9856	3022	1474	7579	2893	5093	2646	4502	3000	2653	7469	4240	3331	4948	172	1268	1907	2386	7060	307	235	1228
GCF_000235365.1	NC_016454	NC_016454.1	Eremothecium cymbalariae DBVPG#7215 chromosome 6; complete sequence.	282274	284722	197979	194303	0	959278	0.29	0.3	0.21	0.2	0.41	0.9524	0.0137	0.9864	1.9759	249	242	491	210451	190638	131949	156903	0	689941	0.3	0.27	0.2	0.24	0.43	0.9092	0.2225	0.8088	1.9641	0	232	219	451	195858	177807	122874	146766	0	643305	0.3	0.27	0.19	0.23	0.43	0.9064	0.2325	0.8045	1.959	0	1113	1313	553	833	3812	0.29	0.35	0.16	0.2	0.35	0.8573	0.4012	0.6868	1.8763	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9	7	16	220	316	290	365	1191	0.18	0.26	0.24	0.31	0.55	0.8465	0.4309	0.6684	1.9287	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4608	7311	2703	4176	3712	5614	4411	6054	2694	2234	6883	8348	3698	2148	3280	4462	5168	3367	3362	5463	2330	4612	1326	8375	4101	2515	2702	6256	4299	2599	3296	2754	2093	3585	3519	3875	1616	1399	2804	2167	2171	782	6756	2350	1089	5346	2284	3660	1850	3214	2326	1985	5010	3105	2509	3619	150	1054	1486	1654	4823	261	241	779
GCF_000235365.1	NC_016455	NC_016455.1	Eremothecium cymbalariae DBVPG#7215 chromosome 7; complete sequence.	291570	292068	197213	199237	0	980088	0.3	0.3	0.2	0.2	0.4	0.9502	0.006	0.9941	1.9735	253	227	480	218455	201492	135870	161901	0	717718	0.3	0.28	0.19	0.24	0.43	0.9111	0.2121	0.8171	1.9652	14	228	210	438	192312	176572	120841	144325	0	634050	0.3	0.28	0.19	0.24	0.42	0.9067	0.2302	0.8052	1.9583	14	1626	2024	995	1339	5984	0.28	0.35	0.16	0.21	0.36	0.8645	0.3849	0.6959	1.8967	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6	8	14	208	262	257	328	1055	0.2	0.25	0.24	0.31	0.55	0.8689	0.2845	0.7659	1.96	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4544	7238	2618	4181	3827	5310	4621	6062	2675	2349	6642	8014	3505	2006	3025	4260	5134	3098	3223	5474	2159	4640	1410	8236	4171	2305	2764	6254	4194	2698	3126	2763	2035	3536	3338	3689	1613	1369	2796	2199	1970	699	6753	2153	1155	5349	2340	3671	1915	3241	2289	1929	5027	3117	2460	3610	169	969	1467	1655	4844	342	372	734
GCF_000235365.1	NC_016456	NC_016456.1	Eremothecium cymbalariae DBVPG#7215 chromosome 8; complete sequence.	267350	267515	180679	181912	0	897456	0.3	0.3	0.2	0.2	0.4	0.9518	0.0037	0.9963	1.9733	218	207	425	203151	185573	123127	149835	0	661686	0.3	0.27	0.19	0.23	0.42	0.9106	0.218	0.8134	1.9633	0	201	194	395	189310	172878	115434	140084	0	617706	0.3	0.28	0.19	0.24	0.42	0.9072	0.2406	0.8011	1.956	0	1126	1343	521	885	3875	0.29	0.36	0.14	0.22	0.35	0.8554	0.4311	0.6722	1.8772	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10	2	12	179	223	215	265	882	0.21	0.26	0.24	0.3	0.54	0.8772	0.3162	0.7441	1.9565	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4343	7146	2398	3678	3548	5472	4126	6063	2504	2148	6732	8036	3649	1975	3085	4215	4860	3083	3159	5518	2220	4320	1312	8192	3862	2197	2659	6361	4338	2509	3174	2713	1892	3520	3240	3666	1467	1304	2787	1961	2033	676	6728	2113	1015	5129	2195	3553	1773	3079	2312	1824	5002	2912	2461	3341	151	981	1395	1662	4705	265	308	843