GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000091025.4	NC_005782	NC_005782.2	Eremothecium gossypii ATCC 10895 chromosome I; complete sequence.	167767	165799	179528	180320	693414	0.24	0.24	0.26	0.26	0.52	0.9586	0.0081	0.9919	1.9989	218	199	417	138304	120779	138504	152680	550267	0.24	0.21	0.26	0.29	0.55	0.9077	0.1888	0.8348	1.969	0	201	182	383	137137	119539	137208	151219	545103	0.24	0.21	0.26	0.29	0.54	0.9086	0.1961	0.8313	1.9656	0	454	424	428	479	1785	0.27	0.24	0.24	0.25	0	0.49	0.8517	0.2977	0.7554	1.9558	2	4	6	287	262	323	325	1197	0.24	0.28	0.28	0.2	0	0.48	0.862	0.3869	0.7341	1.912	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15	13	28	397	520	524	635	2076	0.19	0.25	0.25	0.31	0.56	0.8698	0.3082	0.7473	1.9583	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3981	7119	1608	1931	3091	7606	2649	3034	2509	2145	2820	4431	1649	2942	1440	4571	2404	4880	4202	2989	5854	2374	2784	4327	5268	2640	2272	3388	2073	1665	3894	2224	2894	2042	2152	5838	2631	1949	3828	3616	3022	3082	3185	4393	1566	2482	2529	1798	931	1799	3215	4878	1464	1820	1536	2263	175	2466	2680	1319	2178	174	213	807
GCF_000091025.4	NC_005783	NC_005783.5	Eremothecium gossypii ATCC 10895 chromosome II; complete sequence.	211006	211979	221393	226393	870771	0.24	0.24	0.25	0.26	0.51	0.9588	0.0135	0.9867	1.9994	240	260	500	178876	157035	177213	191534	704658	0.24	0.22	0.26	0.28	0.54	0.9088	0.1838	0.8392	1.9701	0	220	245	465	177369	155553	175728	189837	698487	0.25	0.21	0.26	0.28	0.54	0.9083	0.1924	0.8343	1.9687	0	601	539	556	653	2349	0.3	0.22	0.22	0.26	0	0.48	0.8598	0.3755	0.6902	1.8742	13	7	20	498	561	448	490	1997	0.28	0.28	0.21	0.23	0	0.44	0.8572	0.2343	0.8001	1.9473	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7	7	14	197	240	276	312	1025	0.19	0.23	0.27	0.31	0.58	0.8751	0.2588	0.7811	1.9636	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4958	8860	2171	2727	4175	9376	3714	3978	3441	2663	3835	5712	2334	3577	1998	5489	3480	5791	4964	3957	6808	3230	3577	5778	7088	3368	3115	4499	2822	2219	4831	3022	3601	2647	3018	7253	3131	2351	4698	4692	3817	3739	4294	5360	2007	3391	3086	2178	1172	2455	3723	5817	1971	2538	1984	3393	175	3052	3511	1826	3033	185	253	907
GCF_000091025.4	NC_005784	NC_005784.3	Eremothecium gossypii ATCC 10895 chromosome III; complete sequence.	212518	213571	240412	240993	907494	0.23	0.24	0.26	0.27	0.53	0.9557	0.0037	0.9963	1.9973	242	278	520	180298	157073	188729	205512	731612	0.23	0.2	0.27	0.29	0.56	0.9057	0.1854	0.8374	1.9636	0	229	268	497	178329	155335	186682	203287	723633	0.24	0.21	0.26	0.29	0.56	0.9027	0.2088	0.825	1.9545	0	684	568	727	958	2937	0.28	0.19	0.24	0.28	0	0.53	0.8535	0.3767	0.6855	1.8113	4	3	7	213	229	205	207	854	0.26	0.28	0.23	0.23	0	0.46	0.8818	0.1421	0.8707	1.9728	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7	7	14	199	258	258	319	1034	0.19	0.25	0.25	0.31	0.56	0.8691	0.3053	0.7496	1.9626	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5387	9375	1866	2415	3882	10211	3272	3684	3491	2837	3639	5266	2129	4270	1841	6293	3093	6769	5684	3733	8031	2782	4023	5129	7487	3542	3011	4632	2560	2037	5318	2832	3913	2740	2623	8192	3470	2711	5255	5116	4145	4385	3983	6258	2282	3046	3441	2236	1152	2204	4429	7129	1865	2164	1998	2726	222	3401	3918	1545	2886	156	188	899
GCF_000091025.4	NC_005785	NC_005785.6	Eremothecium gossypii ATCC 10895 chromosome IV; complete sequence.	350898	349344	383826	383219	1467287	0.24	0.24	0.26	0.26	0.52	0.9609	0.003	0.997	1.9985	446	414	860	291826	255312	299042	323305	1169485	0.24	0.21	0.26	0.29	0.55	0.9087	0.1801	0.842	1.9692	20	433	390	823	289634	253221	296729	320540	1160124	0.24	0.21	0.26	0.29	0.55	0.9054	0.1952	0.834	1.963	20	1140	1056	1137	1406	4739	0.28	0.22	0.23	0.27	0	0.49	0.8623	0.3255	0.7264	1.8614	1	4	5	160	165	156	160	641	0.27	0.27	0.23	0.23	0	0.46	0.8944	0.1785	0.8482	1.9725	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	20	31	464	582	561	713	2320	0.2	0.25	0.24	0.31	0.55	0.8685	0.31	0.7534	1.956	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8273	14795	3376	4361	6881	16060	5656	6363	5763	4288	5965	9021	3857	6465	3182	9708	5137	10153	8731	6213	12015	4982	6143	8814	11810	5600	4869	7070	4513	3541	8224	4890	6039	4313	4742	12502	5542	4275	8220	7727	6558	6527	6361	9262	3555	5349	5459	3578	1921	3907	6849	10494	2882	4064	3324	4861	324	5295	6126	2927	4676	302	440	1560
GCF_000091025.4	NC_005786	NC_005786.2	Eremothecium gossypii ATCC 10895 chromosome V; complete sequence.	369293	369153	389408	391286	1519140	0.24	0.24	0.26	0.26	0.51	0.9608	0.0026	0.9974	1.9994	434	432	866	314562	276191	307076	334882	1232711	0.24	0.21	0.26	0.28	0.54	0.909	0.1854	0.8378	1.9715	20	401	411	812	311956	273600	304419	331559	1221534	0.25	0.21	0.25	0.28	0.54	0.9065	0.2032	0.8279	1.9636	20	1341	1184	1226	1586	5337	0.26	0.23	0.22	0.29	0	0.52	0.8405	0.3349	0.7344	1.9404	10	4	14	406	434	372	448	1660	0.27	0.28	0.21	0.25	0	0.45	0.8606	0.2852	0.7664	1.9547	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	22	17	39	578	719	705	878	2880	0.2	0.25	0.24	0.3	0.55	0.8681	0.3055	0.7538	1.9589	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8654	15523	3708	4612	7047	16317	6108	7275	5801	4481	6807	10446	4072	6553	3479	9879	5800	10487	8959	6888	12085	5300	6549	10105	11890	5935	5549	8175	4866	3805	8655	5377	6355	4979	5083	12964	5451	4194	8268	7715	6709	6355	7606	9380	3642	5745	5324	3881	2177	4202	6824	10260	3590	4077	3502	5256	332	5374	5909	3148	5161	287	437	1776
GCF_000091025.4	NC_005787	NC_005787.5	Eremothecium gossypii ATCC 10895 chromosome VI; complete sequence.	443593	441273	475574	476253	1836693	0.24	0.24	0.26	0.26	0.52	0.9609	0.0033	0.9967	1.999	537	533	1070	372233	328063	372024	406723	1479043	0.24	0.21	0.26	0.29	0.54	0.9074	0.1928	0.8317	1.9684	51	503	494	997	368215	323877	368068	402055	1462215	0.24	0.21	0.26	0.29	0.54	0.9049	0.2038	0.8258	1.9641	52	1706	1592	1584	1969	6851	0.26	0.23	0.22	0.28	0	0.51	0.8484	0.3432	0.7123	1.9293	12	13	25	1092	1176	999	1074	4341	0.28	0.28	0.22	0.22	0	0.44	0.8867	0.2421	0.7953	1.9582	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21	25	46	647	875	835	1052	3409	0.19	0.26	0.24	0.31	0.55	0.8569	0.3541	0.7232	1.9447	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10808	18587	4245	5668	8323	19836	7299	8380	7189	5723	7813	11744	4786	8181	3931	11815	6547	12981	11055	8186	15067	6389	7710	11562	14540	7065	6284	9373	5581	4386	10516	6210	7524	5771	6155	15714	6813	5123	10026	9176	8013	8104	8456	11453	4207	6744	6897	4589	2462	4814	8546	12779	4025	4816	4215	6018	441	6478	7605	3514	6165	404	520	2023
GCF_000091025.4	NC_005788	NC_005788.4	Eremothecium gossypii ATCC 10895 chromosome VII; complete sequence.	439456	439517	470513	451463	1800949	0.24	0.24	0.26	0.25	0.51	0.9454	0.0207	0.9797	1.9994	432	655	1087	369374	332098	356245	399232	1456949	0.24	0.22	0.25	0.28	0.53	0.9064	0.1715	0.849	1.9711	195	384	400	784	300336	263811	303419	328879	1196445	0.24	0.21	0.26	0.29	0.55	0.9053	0.193	0.834	1.9623	0	761	683	723	1024	3191	0.24	0.23	0.24	0.29	0	0.52	0.8544	0.3938	0.676	1.8245	1	5	6	212	181	170	185	748	0.29	0.28	0.23	0.21	0	0.43	0.8273	0.2853	0.7759	1.9223	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	16	24	355	437	446	545	1783	0.2	0.25	0.25	0.31	0.56	0.859	0.326	0.7426	1.949	39	117	156	56784	56082	42549	57681	213096	0.26	0.27	0.21	0.26	0	0.47	0.9183	0.1476	0.867	1.9895	8697	15360	3396	4524	6790	16343	6099	6796	5758	4541	6360	9583	3792	6581	3213	9759	5553	10527	8952	6469	12290	5105	6216	9487	11954	5720	5251	7759	4685	3565	8561	5005	6234	4590	4816	12940	5492	4233	8347	8214	6422	6690	6936	9393	3648	5351	5472	3545	1965	4046	6750	10826	3439	4142	3327	5077	300	5425	6298	2869	5117	291	355	1559
NA	NC_005789	NC_005789.1	Ashbya gossypii ATCC 10895 mitochondrion; complete genome.	9600	9531	1943	2490	23564	0.41	0.4	0.08	0.11	0.19	0.8815	0.127	0.8866	1.6955	28	5	33	4273	4648	1151	1393	11465	0.33	0.39	0.12	0.16	0.28	0.8493	0.2568	0.7813	1.8247	0	7	0	7	2004	2491	601	622	5718	0.34	0.44	0.11	0.11	0.22	0.823	0.2969	0.7528	1.7145	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18	5	23	538	637	229	301	1705	0.32	0.37	0.13	0.18	0.31	0.8579	0.2374	0.7964	1.8749	2	0	2	1464	1148	254	384	3250	0.45	0.35	0.08	0.12	0	0.2	0.8618	0.3246	0.7233	1.7001	31	5	57	58	17	2	42	183	0	0	149	39	61	0	27	2	38	0	41	89	0	104	0	48	1	0	45	0	105	9	7	26	0	78	28	0	0	0	2	0	0	0	70	0	0	41	0	37	13	48	0	0	249	35	0	36	1	0	0	0	43	6	33	0