GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_001548555.1	NC_030893	NC_030893.1	Eremothecium sinecaudum strain ATCC 58844 chromosome II; complete sequence.	609538	613249	429697	409418	2061902	0.3	0.3	0.21	0.2	0.41	0.9534	0.0272	0.9734	1.9747	524	697	1221	494542	443170	314393	368584	1620689	0.3	0.27	0.2	0.23	0.43	0.91	0.1824	0.8395	1.9713	0	460	498	958	438747	386157	273125	312865	1410894	0.31	0.27	0.19	0.23	0.42	0.9104	0.2036	0.8247	1.9628	1	1847	1962	971	1105	5885	0.33	0.34	0.16	0.17	0.33	0.8504	0.3179	0.7169	1.8236	17	95	112	8439	8978	5905	8010	31332	0.27	0.29	0.19	0.24	0.43	0.8721	0.1842	0.8418	1.9682	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16	10	26	374	499	471	595	1939	0.19	0.26	0.24	0.31	0.55	0.8735	0.3168	0.7441	1.956	31	93	124	44826	45198	33728	45756	169508	0.26	0.27	0.21	0.26	0	0.47	0.9176	0.1327	0.8803	1.9901	10113	16468	6367	9255	8709	12386	10407	13623	5082	5079	14810	19159	8703	4029	7123	9940	10549	6093	7491	11450	5212	9743	3345	17620	8858	5030	7632	11579	8830	6145	6515	7293	4580	8592	7826	9449	3807	2711	6970	4604	4997	2229	15589	4783	2604	11945	3455	7708	3745	6786	4488	4040	10960	7176	5157	8485	400	1942	2926	3952	10655	606	514	1948
GCF_001548555.1	NC_030894	NC_030894.1	Eremothecium sinecaudum strain ATCC 58844 chromosome III; complete sequence.	416571	420153	281214	280091	1398029	0.3	0.3	0.2	0.2	0.4	0.9559	0.0063	0.9937	1.9718	369	383	752	341555	304175	210738	245027	1101495	0.31	0.27	0.19	0.23	0.42	0.9119	0.1922	0.832	1.9668	0	343	374	717	338888	301033	209182	243152	1092255	0.31	0.27	0.19	0.23	0.42	0.9102	0.2092	0.823	1.9601	0	2002	2373	973	1210	6558	0.31	0.37	0.14	0.17	0.32	0.8445	0.3115	0.751	1.8664	17	0	17	374	412	240	246	1272	0.28	0.34	0.2	0.18	0.38	0.8652	0.3105	0.7571	1.911	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9	9	18	270	336	328	405	1339	0.2	0.25	0.24	0.3	0.55	0.8753	0.2785	0.7671	1.9647	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8070	12966	4696	7138	6779	9650	8166	10856	4166	3948	11225	14915	6425	3120	5234	7815	7967	4705	6081	9025	3850	8182	2468	13620	6594	3762	5889	9395	6861	4655	5147	5595	3612	6585	5887	7378	2851	2017	5709	3670	3784	1630	12035	3727	1893	9163	2573	6188	2998	5229	3497	3078	8535	5322	4018	6354	269	1499	2090	3139	8089	506	355	1414
GCF_001548555.1	NC_030895	NC_030895.1	Eremothecium sinecaudum strain ATCC 58844 chromosome IV; complete sequence.	421204	417269	282467	284026	1404966	0.3	0.3	0.2	0.2	0.4	0.9561	0.0074	0.9926	1.9728	414	380	794	329449	293879	207448	237370	1068146	0.3	0.27	0.2	0.23	0.42	0.9118	0.1879	0.8352	1.9686	16	395	366	761	326731	290682	205679	235224	1058316	0.31	0.27	0.19	0.23	0.42	0.908	0.2073	0.8235	1.961	16	1983	2353	1031	1314	6681	0.32	0.36	0.14	0.17	0.31	0.8457	0.3213	0.7252	1.7794	7	1	8	397	409	312	301	1419	0.3	0.3	0.19	0.2	0.4	0.899	0.1614	0.855	1.9525	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12	13	25	364	462	450	552	1828	0.2	0.25	0.25	0.3	0.55	0.876	0.2857	0.7668	1.9555	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7651	12479	4692	7082	6650	9217	7839	10085	4103	3885	10905	13861	6417	3077	5244	7659	7976	4545	5771	8901	3942	7537	2548	12918	6791	3792	5589	8790	6783	4662	4843	5534	3500	6319	5886	6955	2793	1998	5434	3603	3802	1584	11349	3647	1915	8660	2723	5802	2743	5040	3506	3057	8138	5322	3809	6075	300	1488	2117	2928	7980	517	489	1496
GCF_001548555.1	NC_030896	NC_030896.1	Eremothecium sinecaudum strain ATCC 58844 chromosome V; complete sequence.	336663	338459	226107	222377	1123606	0.3	0.3	0.2	0.2	0.4	0.9551	0.011	0.9891	1.9704	287	313	600	275619	245476	167771	196040	884906	0.31	0.27	0.19	0.23	0.42	0.9113	0.1925	0.8312	1.9663	16	273	306	579	273622	243199	166437	194512	877770	0.31	0.27	0.19	0.22	0.41	0.9088	0.2121	0.8195	1.9593	16	1600	1798	929	1060	5387	0.31	0.35	0.17	0.17	0.34	0.8605	0.2866	0.7642	1.8919	6	1	7	178	192	135	146	651	0.28	0.3	0.2	0.22	0.42	0.8616	0.1611	0.8565	1.9599	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	6	14	202	265	256	310	1033	0.2	0.25	0.25	0.3	0.55	0.8685	0.2894	0.7589	1.966	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6461	10623	3823	6078	5678	7426	6727	8787	3263	3254	9419	11890	5087	2326	4262	6147	6492	3603	4554	7457	3047	6530	1963	11114	5271	3071	4680	7509	5673	3940	3871	4569	2873	5370	4869	5724	2151	1573	4539	2800	2973	1245	9773	2822	1525	7517	1994	4971	2375	4014	2816	2545	6912	4334	3264	5110	252	1176	1636	2485	6476	396	260	1206
GCF_001548555.1	NC_030897	NC_030897.1	Eremothecium sinecaudum strain ATCC 58844 chromosome VI; complete sequence.	274168	272190	183571	182721	912650	0.3	0.3	0.2	0.2	0.4	0.9531	0.0059	0.9941	1.9717	272	241	513	215878	194746	134797	155972	701393	0.3	0.27	0.19	0.23	0.42	0.9101	0.1852	0.8369	1.968	0	249	229	478	213766	192224	133318	154232	693540	0.31	0.28	0.19	0.23	0.42	0.9068	0.1998	0.8294	1.9617	1	1298	1521	689	761	4269	0.32	0.36	0.16	0.17	0.32	0.8589	0.3201	0.7012	1.8248	6	1	7	206	232	156	183	777	0.29	0.29	0.19	0.23	0.42	0.8661	0.2926	0.7562	1.9419	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17	10	27	380	509	490	617	1996	0.19	0.26	0.24	0.31	0.55	0.8639	0.3462	0.7258	1.9472	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5010	7953	3126	4826	4351	6038	5262	6904	2505	2447	7027	9192	4367	1995	3396	4685	5154	2795	3877	5875	2445	5339	1461	8619	4043	2402	3528	6013	4328	3068	3121	3408	2220	4118	3964	4661	1726	1243	3513	2310	2294	956	7373	2348	1190	5959	1698	3964	1887	3349	2253	2022	5579	3471	2565	4529	206	896	1416	2151	5175	353	278	935
GCF_001548555.1	NC_030898	NC_030898.1	Eremothecium sinecaudum strain ATCC 58844 chromosome VII; complete sequence.	279083	279312	184676	185070	928141	0.3	0.3	0.2	0.2	0.4	0.9525	0.0015	0.9985	1.97	238	252	490	218973	197207	135272	156276	707728	0.3	0.28	0.19	0.23	0.42	0.9112	0.1855	0.837	1.9677	0	222	239	461	217407	195400	134209	155029	702045	0.31	0.28	0.19	0.23	0.42	0.9087	0.1939	0.8324	1.9645	0	1053	1224	563	651	3491	0.32	0.36	0.16	0.17	0.33	0.8446	0.3107	0.7485	1.8823	7	0	7	136	123	88	80	427	0.31	0.29	0.2	0.2	0.4	0.8491	0.3938	0.6831	1.9197	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9	13	22	336	413	392	492	1633	0.21	0.25	0.24	0.3	0.54	0.875	0.2498	0.7893	1.9704	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5092	8215	3182	4734	4542	5963	5270	7029	2537	2535	7250	9553	4213	1924	3327	4822	5264	2961	3933	5910	2318	5357	1586	8657	3969	2474	3718	6133	4651	3042	3164	3521	2303	4326	3733	4883	1858	1214	3722	2228	2361	1034	7650	2292	1292	5920	1729	3875	1991	3329	2200	1885	5733	3534	2488	4339	147	873	1428	2037	5295	298	230	930
GCF_001548555.1	NC_030899	NC_030899.1	Eremothecium sinecaudum strain ATCC 58844 chromosome VIII; complete sequence.	328779	328515	217706	218229	1093229	0.3	0.3	0.2	0.2	0.4	0.9551	0.0016	0.9984	1.9702	295	305	600	264573	234697	161875	186994	848139	0.31	0.27	0.19	0.23	0.42	0.9094	0.1934	0.8307	1.9659	0	278	294	572	262760	232705	160750	185705	841920	0.31	0.27	0.19	0.22	0.42	0.9085	0.2106	0.8218	1.9598	1	1299	1415	619	731	4064	0.33	0.35	0.15	0.17	0.32	0.8464	0.3208	0.7134	1.8734	9	3	12	244	256	176	168	844	0.3	0.3	0.2	0.2	0.4	0.8348	0.2272	0.8063	1.942	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	8	16	235	292	305	363	1195	0.19	0.25	0.25	0.31	0.56	0.8559	0.3631	0.7174	1.9429	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6204	9992	3686	5661	5243	7259	6200	8149	3153	2907	9145	11397	5249	2309	4259	5981	6356	3457	4531	7094	2949	6216	1878	10675	4873	2915	4402	7193	5327	3568	3840	4380	2701	5082	4570	5617	2162	1597	4261	2653	2874	1270	9412	2823	1519	6942	2022	4815	2319	3973	2714	2290	6676	4170	2994	4920	246	1187	1654	2311	6324	466	345	1265